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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000043_pilon:194250..197108- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041313 ID=XLOC_041313|Name=XLOC_041313|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2859bp|location=Sequence derived from alignment at sc0000043_pilon:194250..197108- (Clytia hemisphaerica_ch_hm2_pilon)
GAATATGCATTCTTGTTGACTCAAAAAGCAAATTTAAGATTTATGAAGAA
TATTAGAGAAAATCACGTGACGAATATTGACTTCATGGCGACATCGCATC
AAACATATCACCATGGCGACCAGCAAACCGTGACGTTGTTAGGTTTGATG
TGTCGTATCTATACATCAACCATCTTACAGTTACACAATGTCATATCAAC
AAACACACCAACATTGAGTGAAGTAATCAAAATGAAGATACCAAGAGAGA
CTGGAGGTAGGTCGACTTTATACATACTCAATAGATTTGAAAATAAAACT
TCATAGTCAGGAAACAGCCGAACATTTTTTGAAGGTAAATGGAAACCCCT
GAAAATATGATAATGTCTATTACCATATACACTCTAAATACACCCTAAAA
CAGTCCACCGACACGGTTTTTACGAGTCCTTTGGCACAAGTCACATTAAA
ACAGACTGTTAGGTTTTTTTGAGACAGGAGTGCGATTGGATATTTTCTAT
AGGTCACCTTCGACACTCCGAGAACATTCACGTCAAGTTTCCACCAAACG
CAGTCAACACTAACCATCTTAACGCTTCGCTATCCGTTATCAAAGATGAA
TCTTTGTACCATTACGATACCGGCTCCAATAAGACGAAACTAGCGACGCC
AATAATATGTTTGGGTCCATGTGGAACAGTTTTCAACAGACACGTCAAAG
TGACTCTACCCTTAATAGAAGGTTTGACATTTTTTTCACTCTGTTTGGAT
TGGAACCAAGTAGTCCATCCACCTTAGAACAATAATTTTTTTAACCGTAT
TTTAGATTTCCTTCGTTGTCAGGCGTTGTCTTTCCTGATTTGATTATTTG
AGATTAGACTAGTAAACTTTTGTGCTCACTATGTTTGCTGAATATAACGA
CTAGATCTAAAAGGTCATGTTTATATTTCGGCTTTCCATACCACTGTCCT
GCGGTAATTTATCTTTCTTATAAGATCTCGTTGGAAACACTATTCTCGTG
TTTCTGTGTTCAAGGAAAGGCAGACGCTCTCTAGTCTTGCTAAAAATAAA
CCTGGTATTGCATCAGTAAAGCCATTTGAACTCTAATCCATTATTTCTTC
ATGCTAGTACGCCAACAATATAACATGTTGTTGTGGAAGTGGTTTGTAAA
ATTATGCTTTAGCTGTTTCTTATTTCGATTTTCATAGACAGACGTAAACT
GTATATTGTTATAGCCGAGAGTGTTATAAAGTATCTTGGTCTTTTAGAAT
TGCCTTCGAAATCGAAACAATGCAAACTTCTCATAATGGTCAGCCAAACT
CTTCCCGGTGACCCACCTCGATGGTCAAGGCTCTATTCACACTATGAAAT
CAAACAAGCACACAACGGTACTCGTTGCATTACGTTCGAAGTTCCTCACT
TCAGTGTATACAAGGTCTTATGGAGTTATGTTGACAGCACCTTACCAGAG
ACTATCAAGCTGCATGCTTCAAGCACGCTAAGCGGTTTTAGTTTCAAGAC
GAACTTCGAGGCACGTATGACGGATTGTAACCATAGCAATCAGTTTGCCT
TGTGTATTATTGGATGCCGTGAAAGTGGCGATTCTGAAATGAAACAACAG
TATCCACTACAAGTTGGTTCTTGTAAAGCAAAGAAAATACAGACCGGAAA
GTTGAGGATTAGGTAAGAATTTTATCAATTTTTCAAAATTAGACGGAATC
TAGAAATCTTGTCAGCCGAGTTGCTACAATGTTTGATTGTTAATGTAAAA
TCCAAGAAAGAACGGAGAAAAAAAAGTTTATTGACGTTGCATTATCGCAG
GGTCACTTTTGCCTGAATTTGATTGTTTCATTTCAAAATGAAGTTTCAAA
TTTCATCACATATATAACACTGCAGATTGAAATCCGAATTATTCACTGCT
GATCAACAACTTGGCGAAGAAAACCTCACAAAAGACATCGACTTCAATGG
ACATGATATAGATGCTCAGTTCTCATGTGTGCTGACGTCAGCAACATCTC
AAAAGGTTCTTGATCTCGAGATGTTTGGGAAAGTGTTCATATCACAACTA
AGTGAAGATGGAAATGCTGAAAATGAATTTTCATTCAACCTCATCAAATC
TGTAAGTAGCCTCAATCTCGTACCCAGCTGGTACACAACGTTGTTTCAAC
GTTCACCTAACGCTATATGGTCGTTATGAACATTAGATAAACGTTGAAAT
AACGTTGTGTGCTAGCTGGGTCGTGATACAATCGTTAGCACTACCATAAT
CACAATAAGGAAACTTAAGGAACTGGGTCCGAGTTTGTAAGTAAGCAACA
CGGCGCGCTACTCGTTTTCAAGGGCGCAGTTTCTCCCACTGAGGGAGGGA
TAAAACATCTGCTTCCCTTTATTTCCAGTGTCAATTTCAAGAACATTTAA
ATTTACCTGAGATTTATGTTTTCGAGCTAATTTATCATTTTCGATTGTTC
TTGAATACACGCTTTTTTTAGATAAGAATACACTTTATAAGAATGTCCAT
GATGAAAATGGCCAACAAATTAAGAATAATGCTAAGAATATCATCATGGA
ATTTTGCTACTCAAGCTAAGAATGCCATTTTTAGAGCATTTTCAATTGTA
AATTGTCAATTACCCCAAGTAAGGATCACTCCTTTCACAAAAATGCCATT
TTATGCTTGCGACGTATGTACTAAATGTTAAATCTAGTACGAATTAGGAT
CCTAACCTAAGAATGTACTGTAAGAATATTTTAGGATGATTTTCCCAAAA
AAGTTAAGAATATCCATAATGAAATGGATTCACACCATTCTTATAAAAAG
AGCGTGTACTCTCCTCGTGAATTTTCTAGAAGAATACAAAACCAACAAAT
GTCACAAAT Coding sequence (CDS) from alignment at sc0000043_pilon:194250..197108- >XLOC_041313 ID=XLOC_041313|Name=XLOC_041313|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2292bp|location=Sequence derived from alignment at sc0000043_pilon:194250..197108- (Clytia hemisphaerica_ch_hm2_pilon)
GAATATGCATTCTTGTTGACTCAAAAAGCAAATTTAAGATTTATGAAGAA
TATTAGAGAAAATCACGTGACGAATATTGACTTCATGGCGACATCGCATC
AAACATATCACCATGGCGACCAGCAAACCGTGACGTTGTTAGGTTTGATG
TGTCGTATCTATACATCAACCATCTTACAGTTACACAATGTCATATCAAC
AAACACACCAACATTGAGTGAAGTAATCAAAATGAAGATACCAAGAGAGA
CTGGAGGAATATGCATTCTTGTTGACTCAAAAAGCAAATTTAAGATTTAT
GAAGAATATTAGAGAAAATCACGTGACGAATATTGACTTCATGGCGACAT
CGCATCAAACATATCACCATGGCGACCAGCAAACCGTGACGTTGTTAGGT
TTGATGTGTCGTATCTATACATCAACCATCTTACAGTTACACAATGTCAT
ATCAACAAACACACCAACATTGAGTGAAGTAATCAAAATGAAGATACCAA
GAGAGACTGGAGGTCACCTTCGACACTCCGAGAACATTCACGTCAAGTTT
CCACCAAACGCAGTCAACACTAACCATCTTAACGCTTCGCTATCCGTTAT
CAAAGATGAATCTTTGTACCATTACGATACCGGCTCCAATAAGACGAAAC
TAGCGACGCCAATAATATGTTTGGGTCCATGTGGAACAGTTTTCAACAGA
CACGTCAAAGTGACTCTACCCTTAATAGAAGGTCACCTTCGACACTCCGA
GAACATTCACGTCAAGTTTCCACCAAACGCAGTCAACACTAACCATCTTA
ACGCTTCGCTATCCGTTATCAAAGATGAATCTTTGTACCATTACGATACC
GGCTCCAATAAGACGAAACTAGCGACGCCAATAATATGTTTGGGTCCATG
TGGAACAGTTTTCAACAGACACGTCAAAGTGACTCTACCCTTAATAGAAG
AATTGCCTTCGAAATCGAAACAATGCAAACTTCTCATAATGGTCAGCCAA
ACTCTTCCCGGTGACCCACCTCGATGGTCAAGGCTCTATTCACACTATGA
AATCAAACAAGCACACAACGGTACTCGTTGCATTACGTTCGAAGTTCCTC
ACTTCAGTGTATACAAGGTCTTATGGAGTTATGTTGACAGCACCTTACCA
GAGACTATCAAGCTGCATGCTTCAAGCACGCTAAGCGGTTTTAGTTTCAA
GACGAACTTCGAGGCACGTATGACGGATTGTAACCATAGCAATCAGTTTG
CCTTGTGTATTATTGGATGCCGTGAAAGTGGCGATTCTGAAATGAAACAA
CAGTATCCACTACAAGTTGGTTCTTGTAAAGCAAAGAAAATACAGACCGG
AAAGTTGAGGATTAGAATTGCCTTCGAAATCGAAACAATGCAAACTTCTC
ATAATGGTCAGCCAAACTCTTCCCGGTGACCCACCTCGATGGTCAAGGCT
CTATTCACACTATGAAATCAAACAAGCACACAACGGTACTCGTTGCATTA
CGTTCGAAGTTCCTCACTTCAGTGTATACAAGGTCTTATGGAGTTATGTT
GACAGCACCTTACCAGAGACTATCAAGCTGCATGCTTCAAGCACGCTAAG
CGGTTTTAGTTTCAAGACGAACTTCGAGGCACGTATGACGGATTGTAACC
ATAGCAATCAGTTTGCCTTGTGTATTATTGGATGCCGTGAAAGTGGCGAT
TCTGAAATGAAACAACAGTATCCACTACAAGTTGGTTCTTGTAAAGCAAA
GAAAATACAGACCGGAAAGTTGAGGATTAGATTGAAATCCGAATTATTCA
CTGCTGATCAACAACTTGGCGAAGAAAACCTCACAAAAGACATCGACTTC
AATGGACATGATATAGATGCTCAGTTCTCATGTGTGCTGACGTCAGCAAC
ATCTCAAAAGGTTCTTGATCTCGAGATGTTTGGGAAAGTGTTCATATCAC
AACTAAGTGAAGATGGAAATGCTGAAAATGAATTTTCATTCAACCTCATC
AAATCTATTGAAATCCGAATTATTCACTGCTGATCAACAACTTGGCGAAG
AAAACCTCACAAAAGACATCGACTTCAATGGACATGATATAGATGCTCAG
TTCTCATGTGTGCTGACGTCAGCAACATCTCAAAAGGTTCTTGATCTCGA
GATGTTTGGGAAAGTGTTCATATCACAACTAAGTGAAGATGGAAATGCTG
AAAATGAATTTTCATTCAACCTCATCAAATCTAAGAATACAAAACCAACA
AATGTCACAAATAAGAATACAAAACCAACAAATGTCACAAAT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000043_pilon | genome | sc0000043_pilon:194250..197108 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1117-1146:31 |
| Aaloc | 892-1116:984 |
| Aaloc | 478-888:1611 |
| Aaloc | 259-474:2356 |
| Aaloc | 1-255:2860 |
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