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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000408_pilon:177543..181660+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_015273 ID=XLOC_015273|Name=XLOC_015273|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4118bp|location=Sequence derived from alignment at sc0000408_pilon:177543..181660+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGGATTATGTTAGCCGTCGTTTTTGCCATCGCAACTTTATCAACAGT
TTTCAGTAAGTCATCTATCCATCTAGTCCTGATAAATAAAACAAGTTTAa
ataaaacaaagttttaagaCCAAGTActcatactcttaggttccaaataa
acggggaggggttggaataaacgGGATCTTACTTaggaaaacccaaaaat
aaggtaaatataggctaaaataaGAGGGGAGGttgaaagattttcgaaaa
atgaacaAGCAGGAGGGGGCATTTATttagaacctaagagtaagctgTAC
AGCGCATGTGCCCTGGGCGAAGCACTCAAGATAAGAAACGAATCTACCGC
CCTGAATGGCAcgctttttagtgaaaaagttaGGAAAACGAACTTTTTTG
GGTAAAGATTTGGCAAATATGATGAccattttttccagaaaaatggacaa
aaacttTCACTTTAAAACACGGCgatctttgattggattaatcggattca
aatttccttgttttagcgtaatttcaaaaaattaactgagaaaaaatgct
ttcttttacttttatcttttagaggacaaatataagtacattcttctagc
actttcctatccggaattatctcgattccgatttagaggaatctcaaccg
ggatgaggacgggatagagggatctctcgaaaacgaaagtgcccaataac
tggtgaacagtttgatgtatcaaaagactttttttcctacttttacattg
ctataaAGAGActatataccaaatttcatctccttttgagcactacttaa
ggagatacaagggatattagccaaaataatcccgattttacaaaagttcc
aatgaaagatcactgtgaaagaatttcaacatattttctcaaatttttat
aaAGCTCCTCTGCAATGTTAGGGTCCAACCTTGAGACCATAGTAGTTTTC
AAAGCAAAGTGTCCGGGTGCAGGTGTTTCTGTAGAGACACCCCTGCCTCT
ATACCCTAGTGGGTGTTAAGCACCCAGTGGAGTGGgaatagaaaatataa
aattcactggggtgcaaaatattctttcaaatattgagtggggtggtaga
aatcttttgattttcacTGGGGTGAGAAAAGTTTTGACAGCTTTTTACAT
GACTTTTGGTTTAAAAGCTAGTCAGAGTCTGattcccagttggcacacaa
gggccacacaacgttgtttcaacgttgatctaatgttcataacgtccata
taacgttagatgaacgttgaaacaacgttgtgtgccagctgggtttatAT
ATATGGTACTAAAGTAGAAGTTTCATTTTGATTCGATGGATCCATGACAA
TATATGACAATACTGATCACTTGTTTGCAGGTTTCGAATGTGGTTTAACA
AAGAAGCAAACAGATGCAATGAACAATATCAACTCAAGAATCATAGGTGG
TGTGGAAACTGAACTCGGTCAATGGCCTTGGATAGTTAGTATTAATATAC
GATATCGGcgttccgaattctccccgaatgattaccaatgatgcattgcg
cggaaagtcaatatcgtccgtgaatttatttgcgcaatgcatcatgggta
atcattcggggtgaattcggaaagccgatttcgtctattgaaaaactttt
agttTATCATCCATATTTTACTCGATTACTCAATTACTTGTTATATGAta
cagcccagctggcacataacgttgtttcaatttGTCTCTATTCTTGACTG
ATATATCGCTCTACCGATGGTAAAGAGCCCTTTCTTGAATCGCAAGTCAG
ATTTGCAAATAactttgtttcaacgttcatctaacgttatatggatgttg
tgaacattagatggacgtcGATTCAATGTTGTGTTCCAGCTGGGAGTCAA
CCATAACTGAAACTCAAACATCTAAAATATAGAGTGTTTATAAAAGTata
tgacttgaaagttagagagTCGAAATAATATTAAattttagagagcgtca
actatatATTTCTAAACTTAATATTCTTAGGCTGGTCTTACAAAGATCAA
TCAAACTATAAATGGACGTCCCTTCTGCTCAGGGTCATTGATTCATCCAA
AATGGATCCTAACCGCTGCTCATTGTTTCCGCTTCCCAGAATTTCGTGAA
GTCAGAGTAACTTTAGGTAagaagatatttttaattttagtatttttgag
TAAAGAGTTATTTCAAGACATTAAATCATGTTAATTTTAGTATCTATGTA
CGAACCTCTTTGACGTATTAGGGTTGGGTTCCAGTTTAATAAGATGACGT
AAAATCTCGATATCTAAGTAACTGTCAATGCAATAATATCCAAACCCTGA
CTCTTTCATGCATGTAGATCAAGGAAAGAGTTGTGAATGTCTTTGACCTT
TGAATCTTTCTTAGCAGATTCTTCTCTAGCTTTTGACCATATCTTATCGT
TTGTCTCTTAAAACCAAAAACCATCGCAATCTTTTGACTTgatgaataca
ccttttcgacagtaaccgccaattgccgtgcgggcatttttttgtccgtt
tatcccactaaaaccgtcccagtccttttttcgcacttatagacaataga
aaaatgtgtcaaaaaagaattggatcgagtttagaggGATAATTGGCATA
ATTAAAtgattaagtggcacgcgcttGACCacgcggctacggtcgaaaag
gtgtattgttccATCTTAAATTTTAGGAGATCGAAACTACACAAAAGAGG
AAGGAACCGAACAGCGTCGAAAAGTTATTCGTATCGTGGAGCATCCAAAA
TTCAGCCTTGAGACAGCCGATAACGACTATGCATTGGTAGAACTGGAGAG
TCCTGTCGAGATCAATGATTTTGTGCGACCTATCTGTTTACCACGAAGAC
CACGAGGAAGATATGCTGGTcgtaattgtaaaattattGGTTGGGGAATT
TCGTTTGTCGGTGATTTTTCTGTTACAAGACCAGAggtgaaataatattt
ttttaaccccctggatatcggatatccagggggttaaagatttttgttca
aaagtggatatccagggggttaaatatctacaaggtagcggatatccagg
gggtaaagtgtcttttcaattaaaaaaatacaatatcaaggggtaagcat
ctttatacgagaggatatccagggggttgagcatttttttaagcgtggat
atccagggggtctttactaataaagtggatatccagggggttcgatactt
cgaaaaatcaatatcctcaacagtgggggtaaaatctttttctggaaaag
cccaatcgaCCCATATTTCTCTAACAAAGCTTTTAATAAATCTTTCCTCT
AATCTCGAATTTTCCTTCATCTAACAAGCCAATTCAACGTGTGTGTTCAA
GTTATGgaccaagctggcacacaacgttgtttcaacgtttatctgacgtt
cacaacgtccatataacgttagatgaacgttaaaacaacgttgtgcctCC
ACTGTACAAGGTGTGGTAGTGAAATCTCTATAAGAGCTGGTAAAACTGTT
AAGGCTTCTTTTACATATTTTTCAGCACTTCAAACCTGAATCTTTATCTT
TGTCTTATCTTTAATAAAGCAAATTGAACTAttttggggtttttaaggct
tttttgatactttttttacAAACACGAAAGATGAGCCTTCGGGTCGcttc
cgactgcggtcgcagacttacttacttattttACAAACACGCTCAGTTTA
TTTTGGCATTTTCGAGCCAActctgtttttctaaaatcatttaaagtctt
tttataacaaagaatctttttgtttaggtCTTATTGGAAGGAGACGTCCG
AATCTTCAATGCGTCCAAATGTTCGAATCTTTGGAAAAGTCGAGTCAACA
TTACACGAAATATGGTCTGTGCCTCCGGACCCAATCAGATTCCAGCACAT
TGTTTCGGTGATTCAGGAGGTCCAATTCAATGTCAGAATGAACGAACAGG
GAAATGGTTTGTAGTTGGGAGTTCATCTTTTAGTACAGATTTCTGTGACG
TCATACCACCTGTTTCATCGTATGTACCAACAAAGTTAAGATGGATTCGA
AAGTTCATCGGATGgtaa Coding sequence (CDS) from alignment at sc0000408_pilon:177543..181660+ >XLOC_015273 ID=XLOC_015273|Name=XLOC_015273|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1692bp|location=Sequence derived from alignment at sc0000408_pilon:177543..181660+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGGATTATGTTAGCCGTCGTTTTTGCCATCGCAACTTTATCAACAGT
TTTCAATGAGGATTATGTTAGCCGTCGTTTTTGCCATCGCAACTTTATCA
ACAGTTTTCAGTTTCGAATGTGGTTTAACAAAGAAGCAAACAGATGCAAT
GAACAATATCAACTCAAGAATCATAGGTGGTGTGGAAACTGAACTCGGTC
AATGGCCTTGGATAGTTTCGAATGTGGTTTAACAAAGAAGCAAACAGATG
CAATGAACAATATCAACTCAAGAATCATAGGTGGTGTGGAAACTGAACTC
GGTCAATGGCCTTGGATAGCTGGTCTTACAAAGATCAATCAAACTATAAA
TGGACGTCCCTTCTGCTCAGGGTCATTGATTCATCCAAAATGGATCCTAA
CCGCTGCTCATTGTTTCCGCTTCCCAGAATTTCGTGAAGTCAGAGTAACT
TTAGGCTGGTCTTACAAAGATCAATCAAACTATAAATGGACGTCCCTTCT
GCTCAGGGTCATTGATTCATCCAAAATGGATCCTAACCGCTGCTCATTGT
TTCCGCTTCCCAGAATTTCGTGAAGTCAGAGTAACTTTAGGAGATCGAAA
CTACACAAAAGAGGAAGGAACCGAACAGCGTCGAAAAGTTATTCGTATCG
TGGAGCATCCAAAATTCAGCCTTGAGACAGCCGATAACGACTATGCATTG
GTAGAACTGGAGAGTCCTGTCGAGATCAATGATTTTGTGCGACCTATCTG
TTTACCACGAAGACCACGAGGAAGATATGCTGGTcgtaattgtaaaatta
ttGGTTGGGGAATTTCGTTTGTCGGTGATTTTTCTGTTACAAGACCAGAg
GAGATCGAAACTACACAAAAGAGGAAGGAACCGAACAGCGTCGAAAAGTT
ATTCGTATCGTGGAGCATCCAAAATTCAGCCTTGAGACAGCCGATAACGA
CTATGCATTGGTAGAACTGGAGAGTCCTGTCGAGATCAATGATTTTGTGC
GACCTATCTGTTTACCACGAAGACCACGAGGAAGATATGCTGGTcgtaat
tgtaaaattattGGTTGGGGAATTTCGTTTGTCGGTGATTTTTCTGTTAC
AAGACCAGAggtCTTATTGGAAGGAGACGTCCGAATCTTCAATGCGTCCA
AATGTTCGAATCTTTGGAAAAGTCGAGTCAACATTACACGAAATATGGTC
TGTGCCTCCGGACCCAATCAGATTCCAGCACATTGTTTCGGTGATTCAGG
AGGTCCAATTCAATGTCAGAATGAACGAACAGGGAAATGGTTTGTAGTTG
GGAGTTCATCTTTTAGTACAGATTTCTGTGACGTCATACCACCTGTTTCA
TCGTATGTACCAACAAAGTTAAGATGGATTCGAAAGTTCATCGGATGgta
agtCTTATTGGAAGGAGACGTCCGAATCTTCAATGCGTCCAAATGTTCGA
ATCTTTGGAAAAGTCGAGTCAACATTACACGAAATATGGTCTGTGCCTCC
GGACCCAATCAGATTCCAGCACATTGTTTCGGTGATTCAGGAGGTCCAAT
TCAATGTCAGAATGAACGAACAGGGAAATGGTTTGTAGTTGGGAGTTCAT
CTTTTAGTACAGATTTCTGTGACGTCATACCACCTGTTTCATCGTATGTA
CCAACAAAGTTAAGATGGATTCGAAAGTTCATCGGATGgtaa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000408_pilon | genome | sc0000408_pilon:177543..181660 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 556-846:3828 |
| Aaloc | 298-555:2729 |
| Aaloc | 160-294:2031 |
| Aaloc | 58-159:1383 |
| Aaloc | 1-54:1 |
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