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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000001_pilon:2601459..2605316- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_024968 ID=XLOC_024968|Name=XLOC_024968|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3858bp|location=Sequence derived from alignment at sc0000001_pilon:2601459..2605316- (Clytia hemisphaerica_ch_hm2_pilon)
AGCCATTTGACACGTCTTCAAGAGGAAATCAAACAACAAGCATGGGAGAT
GGTGCTACAGAGTATGTTGACCTTGTTTTTAGAGATTTAGATAAAGTTAT
GATAGGACACAACATTATACAATGTGTTTATGTTCATTCATACTTACTAG
CTCATTCAATTGTTATTTAGATGTTACAATACACATGAATTCTCTTCCAA
TGATTCTTGATCCAGAAGGTATGGATATTGAACTACGAAAGAGTCATCTA
AATACAGTCAAGGTAATGATAATTAGATTTCAAGGCATAAAGTACTTTTA
GAGACATTCTATAGTTAACACAAAAAGCGGTTGTTTGAAGAAGAATAAGT
GAATAAAAAGACAATTTAAATTTTGCTTTATAAACATACATTAATTTCTG
GCTGAGGCTCATTATGCTTAGAAAATCTTCATGTAGCGCCAGTACTAATA
TGTTGAACAGTGAAAAAGGATGCGGCTTATTATATTTTGATTTTCCCCTA
CATGTTTCGGCCTCGGTCCGTTCTCAAGGGAATCCACTCAACTAATACAA
AGGAGTACAGTATTTTATTTAAAGCTATTGTAATTTTCAAAATATTCGTT
GTCTTCCTGTATAATTGATCCCTTTTTCAAAACAAATCATGAATCACCAC
AATTTATTTGCATTTTATTTTATTTGACTTGATTCTCTTTAGAATTTCAG
ATGGAAATTTATATTTTGACGCAATTGATTGAGGAATTTGAAAGTGAAGC
TGCGAAACCTGACATGAATACCGATATTACAAAGGTGATTTTTCTCTTTG
TTCTCAACTTCAATGTGTGTATTAATTATTTTTGAGGTTCTGTACATTCT
TTAGTACCTTTCGCTTTTGACCAAATGAGATTAAAATCTTAAAACTCTGT
AAATGTGTAATATTTTAAAAGATGATGTGGGTGCCCGTAGGGTCAATATA
ATATACATGGTGATGTTTTTTCATATTATTTGATTTGTTTTTTTGTTTGT
TTGGGGGGCATTGTTTGCATGTAAACAATAACCTCTATTTAATCTCTTTA
GGAAATTGCTTTTAAAAATGTTCAAACCAATCAGATTTTACTCTTTACTT
TAGAGAGGTAAAGGATCTAAGAAGAAGTCGCATCAATCATGGGACTGGTC
CAAAGAGAGGAATCAGGTGTTGAGTGTTATCAACCAATTTTTGCAACTTG
AACTCCAAAGATTGTGGGATCCACCCATTGTAGAAGAAGAATTCGCCAAG
TAATTTGTTTTTCACTTTTTCTTCTACATGTCCTTTTTGATTTCATATCT
TAAGGTTTCGTTTAAAGAAAAGTTTTATGCTATAAGGCTCTGTAATGACA
CAGCGATTATCTGCTTATTAAAAAGTTTATTAACATATGATTACAAAGTT
GTATAGTTTATATAGTTGGACATAAAATATTGATGTTGAATATCCGGAAT
ACCTTCTTCTAATTTCTTTTTCAGTTTGTTCAGTTCCGTATGTTACAAAA
TACTGGAAAATCCTGTCGTGGTTCGTCAAAAAGAAGATAAAGAATTGGTG
ATCAACATCCTCGGCCAGCTCATCAAACGATATAAACATCAACTAGGTTA
GAGACAACATTAATTGTGCATCCAGTACATCTATTTTAGGACATTTCGTC
TACTTCCTACCAGAGTAGGATGATGTTCATTTTTCATTTTTCACTTTCTC
CAGTGTTCCTCAAGTACATTTTGGACATTATTTAAGTGCTGATTCCAAAA
ATTATGCTTATTTTGGGCTCGAATTTAATATAGATCATTTTACCTTTTGC
ACTGAATGCAATACTCTTGAACATTTGAACCATTTTTAACAAATAGTGGT
TTTTACAAACGTTATGTATGAAAGAGCAAGGGCATTAATCGATAATGCAA
TACCTTAGTATTTACCTTTTATTTTCACGCCTTTAGGATATTCTTTAATT
TTTGTGCATCTTGTAATTTCTGGGAAATTTTTTTAAGTGTTTTTGATGAG
AAACGTAGTTAAAGAGGGCAAAAAACTATGAAATCAGGAGTTTTGCTCAC
TTTTAGTTTGCATTTTAACCATTTCTTACATCCCAGGCATATATTTAAGG
TAAATTCGCTGGATTCTAGGATTTGGATTCAAAGATTCAGATTCGGATTC
AGGATTCGAAAAAAGCTTTGTAAAAAAAATTGAAAGAAGATATTGACTTC
AAACCAAAAGATCTTGAAAGATTACATAACATAAAGCAAATCTTAAGAAA
AACCGTTATCAATACGGGCAAGGCCTTGATGCTAATTTGGGAATTTCCCC
TTTTTAGGATTCAAATTGCCAGCATATTGCACACTTTGACTGGTTCCCAG
TCCCCTCATTGTATTTGGATCAAATTTTAAACACCGGATCTTATGGACTA
GGCAGTCTGTGCCACTAACTCGATCGGGAAGATTCTTCCGAAATGGGAAG
AACCTTCCCGAACGGGAAGAACTTAGCTCTAGTTTAGACGGCCGACTTTC
TGCCCTGCCTATTCTAATTGTTAGAGTAGGCAGAAAGAGGGCACAAAGTT
GGTTGTTAAAATCTTTGCTTGGAAAGGTTTGAAAGAAGACATTGCATTGA
CGTCAAAAGAGGGCTATGCATCACTTTAGACGGCCCACTTTATGCCCTCT
TTAATTCGCAATTAGAATAGGCAGGGCAAAAAGTGGGCCGTCTAAACTAG
AGCTTACTCTATTTTTTTCTGCCCGTTTTGGAAGATTCTTCCTCTTTGGG
AAGTTGAAAATTGACTGAATCTTGGCGAAGCTGTACGATGACCGGCGAAA
GTTGAAACTTTTTGGAGGTGAAGAATCATCAAATTTTAAGGTTTTTCACC
GAAAGAAAAGTTGACTTTACCGTAGAAATCTTGTTAAATTGTGAAAAAAC
TGCGTAAACTTCCCAAACGGGAAGTTCCAACCCGATCGAGTTTTCCTTAG
TTCCTCGTTTCTTCCCGATCTGGAAGTCCGTTAACCCGTTTGGGTGTTAA
GTTAATTTCCCGTTCGGGAAGATTCTTCCCATTACGGAAGAATCTTCCAA
TTTTGGAAGAATCTTCCCGATCGAGTTAGTGGCACAGACTGCTAGGTGTT
CTAGAAACTTAGGAAATCAATTTTTAACGATCCCAAACCAAAAACGAATG
CAAGGTTACATGAATTCACTAAATTTTTATATTGCAAAAGTCTTTTTTTT
TCTGCTAAGTTTACGAAGATCACAAATTGTAAAAAAAACTCCCTTTCTCT
GTTTTTTTTTCAAGTTCTTGGAATTATTTATAGCACCAGAAATGGTATGA
ACAATGTATAAACAAATTGAAACCAAAAAAAGACGCTTGAATCCCAATCC
TGCAATCCAGCGAATCTATGGCTTACCCTAATTAGAGGACTCGTTTCTTA
AAAAGAGCGCTAAGATGCATTCCAACACATAATAATCACTAATTCACGCA
CACTTCGCACAGCCTAGTGAGCAAAAATTAATGGGATTAAGGTAACATTT
TAAGCCATTTTGATTTCAGGTGCCAGTATGAAAATGATTCAGCTGCTGCA
ACATTTCGAGCATCTGGTGTCGCCTCTTGCACAAGCTATCACCACTTTCG
TCACTGATTTTGGAGCCAAAAACCTTGTCAGTGATGTCATTAGGTAGGGT
TTATTACACAAAGGCACCGGACGAATATTTTATTTTGTTGTTGTTCTTAC
TTACTATTCTTTGTATTTTTATGTACTTTTTTCTTAGGGAGATTGGTCGA
ATGGAATCGTCGGACTTATCACGTGATACGAGTGGCACGCGAGCTTTCTC
ACAGTTCTTGGTAGAATTAGCTGATAAAATACCAAACCAAGTGCTCCCAA
ACATCAGT Coding sequence (CDS) from alignment at sc0000001_pilon:2601459..2605316- >XLOC_024968 ID=XLOC_024968|Name=XLOC_024968|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1500bp|location=Sequence derived from alignment at sc0000001_pilon:2601459..2605316- (Clytia hemisphaerica_ch_hm2_pilon)
AGCCATTTGACACGTCTTCAAGAGGAAATCAAACAACAAGCATGGGAGAT
GGTGCTACAGAAGCCATTTGACACGTCTTCAAGAGGAAATCAAACAACAA
GCATGGGAGATGGTGCTACAGAATGTTACAATACACATGAATTCTCTTCC
AATGATTCTTGATCCAGAAGGTATGGATATTGAACTACGAAAGAGTCATC
TAAATACAGTCAAGATGTTACAATACACATGAATTCTCTTCCAATGATTC
TTGATCCAGAAGGTATGGATATTGAACTACGAAAGAGTCATCTAAATACA
GTCAAGATGGAAATTTATATTTTGACGCAATTGATTGAGGAATTTGAAAG
TGAAGCTGCGAAACCTGACATGAATACCGATATTACAAAGATGGAAATTT
ATATTTTGACGCAATTGATTGAGGAATTTGAAAGTGAAGCTGCGAAACCT
GACATGAATACCGATATTACAAAGAGAGGTAAAGGATCTAAGAAGAAGTC
GCATCAATCATGGGACTGGTCCAAAGAGAGGAATCAGGTGTTGAGTGTTA
TCAACCAATTTTTGCAACTTGAACTCCAAAGATTGTGGGATCCACCCATT
GTAGAAGAAGAATTCGCCAAAGAGGTAAAGGATCTAAGAAGAAGTCGCAT
CAATCATGGGACTGGTCCAAAGAGAGGAATCAGGTGTTGAGTGTTATCAA
CCAATTTTTGCAACTTGAACTCCAAAGATTGTGGGATCCACCCATTGTAG
AAGAAGAATTCGCCAATTTGTTCAGTTCCGTATGTTACAAAATACTGGAA
AATCCTGTCGTGGTTCGTCAAAAAGAAGATAAAGAATTGGTGATCAACAT
CCTCGGCCAGCTCATCAAACGATATAAACATCAACTAGTTTGTTCAGTTC
CGTATGTTACAAAATACTGGAAAATCCTGTCGTGGTTCGTCAAAAAGAAG
ATAAAGAATTGGTGATCAACATCCTCGGCCAGCTCATCAAACGATATAAA
CATCAACTAGGTGCCAGTATGAAAATGATTCAGCTGCTGCAACATTTCGA
GCATCTGGTGTCGCCTCTTGCACAAGCTATCACCACTTTCGTCACTGATT
TTGGAGCCAAAAACCTTGTCAGTGATGTCATTAGGTGCCAGTATGAAAAT
GATTCAGCTGCTGCAACATTTCGAGCATCTGGTGTCGCCTCTTGCACAAG
CTATCACCACTTTCGTCACTGATTTTGGAGCCAAAAACCTTGTCAGTGAT
GTCATTAGGGAGATTGGTCGAATGGAATCGTCGGACTTATCACGTGATAC
GAGTGGCACGCGAGCTTTCTCACAGTTCTTGGTAGAATTAGCTGATAAAA
TACCAAACCAAGTGCTCCCAAACATCAGTGGAGATTGGTCGAATGGAATC
GTCGGACTTATCACGTGATACGAGTGGCACGCGAGCTTTCTCACAGTTCT
TGGTAGAATTAGCTGATAAAATACCAAACCAAGTGCTCCCAAACATCAGT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001_pilon | genome | sc0000001_pilon:2601459..2605316 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 631-750:121 |
| Aaloc | 508-627:338 |
| Aaloc | 385-504:2384 |
| Aaloc | 238-381:2756 |
| Aaloc | 154-237:3159 |
| Aaloc | 64-153:3687 |
| Aaloc | 1-60:3859 |
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