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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000263_pilon:162346..166206+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_030265 ID=XLOC_030265|Name=XLOC_030265|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3861bp|location=Sequence derived from alignment at sc0000263_pilon:162346..166206+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATCAAAATGGAGAAAGTATTGATACTGTTGGTTGGCTGCTTGGCCTT
AGTGGCGGCACAAGGGTTCGGACAAGAAGACAGAGGTGATTTTCTTTTCG
CttcattcatttttgaaataaaacttaaTCGACTTTCTGTATCATATACA
CTTTGATTTTTACCAATTAATGTTCTTCCTTTTTTCTCATTAATTTTTGG
ATAAGCTttaactttcaaataaaattgtcCCGAGGTTCTCCAAATCAAAT
ATACTAACCGTGCACCATTTGCTTATTTTAGATGCGGCAACAATCAAAAA
TGGTAAGTGTGCAACACTTTGTCTTTACATTTCCATAAGTAGCGATCCAT
GCAAAATAGTAAAAAAGCAAGTCCGAAAAAGGGTTTCATACCTTgataaa
ttccaaaaaatgaatTGTGAGGAAAGATTAATTCGCACTTCACTAATTCA
TCtgttcaaaagaaaaatcatatACAATATTTCATGGACTTTGTAATTTA
GAAATGACTAAATCTAAGGGTTCCATAGTTGAATGATacctattaaaaaa
aaaaaactttagcgGGAATCTAATTTGGCGGATGctccgaaaaaaatttc
agaggGAATCTGATTTGGTGATGGCTGGAATAAATGAACTGGGCGTGAAT
TTGATTTTGTGGTTGAGAGATGTTTGGCCAAAACCGTTTTAATAAGGAAC
TGTTTTGAGCCCTTAAATAGTTAGAATTCagaaaaatacatgaaataaat
taaatttggcaggaaCTTGATCCAAACCTGTcgaattttctttccgccat
tttttttaaagataatattgatattttttcacaaCAAATCAATGTCCAAA
TGGTCCTCAGTAAGTGTCAATTAAGTCTTCTTTCATTACATTTCTCTTTT
TGCGTAGATATCATGGATGGAATTAATACGTTTCAAGGCATGTTGGAGGC
ATTCACTGCTGACGATAAGAAGATGCTCCGGGACGTCAATGATACACTCA
CAAGTTTGTATCTTTTCTTACCAAGTTTCCCGTCTTTAGTACATTCCGCA
GACTCAATATTTCTTGTAACCTGTTAGCTATTCTTTCTATATTAAAACTA
CTTTGAATCTTCTTTTCTGTGTTTCTCTCCCATTTTATGCCAATGAGAGA
ATGTAAACATCGTTAACCCGTCCATTTGTCTTTGCAGTGGAGAGGACGAA
AGCTGAATTACAAGCATACATCAATCCAACTGGCGACAGTACATACTCCA
TTATTGCTCAAGTAATTGGACAAGCCAGCACTTTCATCAACGATAATCTT
AAGAAAATGACCATCAGGTTCGCTTCCGAAGGGGGCTTTTTAAACATCTT
AACAAAAGCTGATCGATTGGATCTCACCCATGATTTGGAAACGCTAAAGA
AAGCCTTCGACGCCTTCATGGTTCACTAcaacaaagtgaaaaatgctTTC
GAATGCAAATTAGACAAACTATGTTACGAACAAGACTTCCAAGCAGCTGA
GGGCGAGTTTCACGTGCTATGGGAAGGTGTCGAAGACCTCAAACCAAAAT
GCAAAAGTGAGTTCgcctgaaaaaaagttttaatgcAGTGGGACCTAATT
TCCCGATTTATTCAAATGAGGTTGAACTTTAACCcaaacattgaaaattg
aaatttctttattcCATTTCTTCATACCAGCTATGACCTTTCTAAAAGca
taaaaaaacgaaattttctcttttgatcACTTTAAGCTTTTGATGCAACT
TGTATCAAGAAGTTTATGGACTACAAAACTATGTTCGAGACCTTCGAATC
AACGAAAATACCTCCAttgaaaaatttattgacaTCTATCTGTGATAAAG
AATGTTATGCAAATGAGGTGGAACGCTTCAATTATGAGAAGAGTTTGTTG
AAATTGGATATCAGTGCCAGTGGTATGGTGGCTGCTGTCCAATTTGCTGT
CAAACACGCCCTCGTCAAACGGCTCAACTCCATCACCAAGAGAATGCACA
TTCGAAAAGAAAAGCTCAACCTTCAAAAGTTGGCCATCGAAGGTATTTCT
CTATAACATTATCCATTTctgtcaagtttttttttatgttgaGTTTTACC
GTAAAAAGCACATGCCGAAATCAtatattcagcgcgcaatcaacgcaaag
aaaagtaaccatgacgacaatcgaAGATCTTagattaagttcaaagttga
tttttatTCTCGTCGTTCAAAACGCAACTGAAAATGTCataaatactttt
aaaaaaaagtcagtgatagagaatcataacataaagatttgtctattatt
tcgatttcattgaagtaacattaccataattaataatttagtaattactg
ttatacatttgggaatcgtgtagaagatttcttttgaaagaaactcattt
caattacatttGGAGGTTTCTGGAGAATTCGTCAATAGTAAACATGTATA
CTGATATAAGTCTGTTAGACAtcaatatggtaatatttgatcttcatctt
tgattctttctacagcgattagattgacacatgcgcgataaaatcttttt
acttggtcctcagaggttaatatgttctttgaaaactcaacctctgatac
tcactCAGGGTAGTTGAGTTTGAGTATAGAAAAAGAATTtcctttttatc
aaaaaatagttttatgcATGCTGAAATCGAATGGTTCgtatttcactttc
gttttctttgaaACCATAGATGCTGAGAAGAAAGAGGACCTTTCTGCTGC
TTTGACCGCCCTCAAAGCCTTGAAAGCTGCTGCTGAAATGGATAGCCAAG
ACTTTCATGAAGCCTTCTCCATGGCCATCGAACTTGAAGGTGCGACTGGT
GACttgtttatttaaaaactaatcTAATTTAATATAAATGTAATCTTAAA
ATCCTTCTCGTAACCATTTTGAACATTCCtttttttGCAGGTAAATTAAG
CGAAGAGGATTTCAATCACATCATACGTCAAGGTAACGGAATGATTTACC
GGATAAGCGGTATGCAATCACAAATCGACGAATGCATCGCTAAAGTGGAG
AACAGTCACTCTTTCATCGCTTTCAAGATTGAAGTCAACGACAATGAAGC
CGTCATGTTGACCAATgctgaaaagttgaaagaaaaaatccgACGTGTCA
AATCaggtacatttttttctttcagtttaaACTATGCATTCAACCAGATT
CAACAAGACGGAGAGTAGAACAAtacaccctgtctcacagccccggtgcc
ACATTTTTCTCAGTGTGGTCAAAAATTgctattgaaattccaataagCAA
TTGTTCCGAGGCTAAAGATTCCaaggttttggagtgcaatttttaacgAT
TGAAtttccaatggggatgaaatcaaggTCATTTTcacagtggggctgaa
attccaggtgttttcccaccgggaacgaaatttttgccaaatttggccCC
AACCAACCGGTGGGGCTTGGGTCCCAGTAGGTCTGTGGCACAGGGGTAAC
AATAATCTGAATAATAGCATTATTCTAAGTTTAAAAAAGCGCTCTTCGTT
GGTTTTAAACCTCTTTTATTTACTTCAAAACAGGAAAACACACTTTATGC
ACTGAACTTTTTGTGGACCCAGCTATCGACCAAACATTGACGGAGGAATT
CGAAGAACTTAGAGCATCTTTTGCTACCAGTGATGTGGAATTCAAGCATC
TCAAAGCAACGTTGAGCAAAGACTTCAAAGAATTGTCCGAATTCGAGAAA
CTTCATGCTTTTATCATGCAACTTGAAACGAACAACTTGGCCGATATGAA
CGAGGCACAGAAATACAAGTATTTCTTACACGTCTACTCCAAAACTCACT
GTAAGTCACTT Coding sequence (CDS) from alignment at sc0000263_pilon:162346..166206+ >XLOC_030265 ID=XLOC_030265|Name=XLOC_030265|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2982bp|location=Sequence derived from alignment at sc0000263_pilon:162346..166206+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATCAAAATGGAGAAAGTATTGATACTGTTGGTTGGCTGCTTGGCCTT
AGTGGCGGCACAAGGGTTCGGACAAGAAGACAGAGATGATCAAAATGGAG
AAAGTATTGATACTGTTGGTTGGCTGCTTGGCCTTAGTGGCGGCACAAGG
GTTCGGACAAGAAGACAGAGATGCGGCAACAATCAAAAATGATGCGGCAA
CAATCAAAAATGATATCATGGATGGAATTAATACGTTTCAAGGCATGTTG
GAGGCATTCACTGCTGACGATAAGAAGATGCTCCGGGACGTCAATGATAC
ACTCACAAATATCATGGATGGAATTAATACGTTTCAAGGCATGTTGGAGG
CATTCACTGCTGACGATAAGAAGATGCTCCGGGACGTCAATGATACACTC
ACAATGGAGAGGACGAAAGCTGAATTACAAGCATACATCAATCCAACTGG
CGACAGTACATACTCCATTATTGCTCAAGTAATTGGACAAGCCAGCACTT
TCATCAACGATAATCTTAAGAAAATGACCATCAGGTTCGCTTCCGAAGGG
GGCTTTTTAAACATCTTAACAAAAGCTGATCGATTGGATCTCACCCATGA
TTTGGAAACGCTAAAGAAAGCCTTCGACGCCTTCATGGTTCACTAcaaca
aagtgaaaaatgctTTCGAATGCAAATTAGACAAACTATGTTACGAACAA
GACTTCCAAGCAGCTGAGGGCGAGTTTCACGTGCTATGGGAAGGTGTCGA
AGACCTCAAACCAAAATGCAAAATGGAGAGGACGAAAGCTGAATTACAAG
CATACATCAATCCAACTGGCGACAGTACATACTCCATTATTGCTCAAGTA
ATTGGACAAGCCAGCACTTTCATCAACGATAATCTTAAGAAAATGACCAT
CAGGTTCGCTTCCGAAGGGGGCTTTTTAAACATCTTAACAAAAGCTGATC
GATTGGATCTCACCCATGATTTGGAAACGCTAAAGAAAGCCTTCGACGCC
TTCATGGTTCACTAcaacaaagtgaaaaatgctTTCGAATGCAAATTAGA
CAAACTATGTTACGAACAAGACTTCCAAGCAGCTGAGGGCGAGTTTCACG
TGCTATGGGAAGGTGTCGAAGACCTCAAACCAAAATGCAAAACTTTTGAT
GCAACTTGTATCAAGAAGTTTATGGACTACAAAACTATGTTCGAGACCTT
CGAATCAACGAAAATACCTCCAttgaaaaatttattgacaTCTATCTGTG
ATAAAGAATGTTATGCAAATGAGGTGGAACGCTTCAATTATGAGAAGAGT
TTGTTGAAATTGGATATCAGTGCCAGTGGTATGGTGGCTGCTGTCCAATT
TGCTGTCAAACACGCCCTCGTCAAACGGCTCAACTCCATCACCAAGAGAA
TGCACATTCGAAAAGAAAAGCTCAACCTTCAAAAGTTGGCCATCGAAGCT
TTTGATGCAACTTGTATCAAGAAGTTTATGGACTACAAAACTATGTTCGA
GACCTTCGAATCAACGAAAATACCTCCAttgaaaaatttattgacaTCTA
TCTGTGATAAAGAATGTTATGCAAATGAGGTGGAACGCTTCAATTATGAG
AAGAGTTTGTTGAAATTGGATATCAGTGCCAGTGGTATGGTGGCTGCTGT
CCAATTTGCTGTCAAACACGCCCTCGTCAAACGGCTCAACTCCATCACCA
AGAGAATGCACATTCGAAAAGAAAAGCTCAACCTTCAAAAGTTGGCCATC
GAAGATGCTGAGAAGAAAGAGGACCTTTCTGCTGCTTTGACCGCCCTCAA
AGCCTTGAAAGCTGCTGCTGAAATGGATAGCCAAGACTTTCATGAAGCCT
TCTCCATGGCCATCGAACTTGAAGATGCTGAGAAGAAAGAGGACCTTTCT
GCTGCTTTGACCGCCCTCAAAGCCTTGAAAGCTGCTGCTGAAATGGATAG
CCAAGACTTTCATGAAGCCTTCTCCATGGCCATCGAACTTGAAGGTAAAT
TAAGCGAAGAGGATTTCAATCACATCATACGTCAAGGTAACGGAATGATT
TACCGGATAAGCGGTATGCAATCACAAATCGACGAATGCATCGCTAAAGT
GGAGAACAGTCACTCTTTCATCGCTTTCAAGATTGAAGTCAACGACAATG
AAGCCGTCATGTTGACCAATgctgaaaagttgaaagaaaaaatccgACGT
GTCAAATCagGTAAATTAAGCGAAGAGGATTTCAATCACATCATACGTCA
AGGTAACGGAATGATTTACCGGATAAGCGGTATGCAATCACAAATCGACG
AATGCATCGCTAAAGTGGAGAACAGTCACTCTTTCATCGCTTTCAAGATT
GAAGTCAACGACAATGAAGCCGTCATGTTGACCAATgctgaaaagttgaa
agaaaaaatccgACGTGTCAAATCagGAAAACACACTTTATGCACTGAAC
TTTTTGTGGACCCAGCTATCGACCAAACATTGACGGAGGAATTCGAAGAA
CTTAGAGCATCTTTTGCTACCAGTGATGTGGAATTCAAGCATCTCAAAGC
AACGTTGAGCAAAGACTTCAAAGAATTGTCCGAATTCGAGAAACTTCATG
CTTTTATCATGCAACTTGAAACGAACAACTTGGCCGATATGAACGAGGCA
CAGAAATACAAGTATTTCTTACACGTCTACTCCAAAACTCACTGTAAGTC
ACTTGAAAACACACTTTATGCACTGAACTTTTTGTGGACCCAGCTATCGA
CCAAACATTGACGGAGGAATTCGAAGAACTTAGAGCATCTTTTGCTACCA
GTGATGTGGAATTCAAGCATCTCAAAGCAACGTTGAGCAAAGACTTCAAA
GAATTGTCCGAATTCGAGAAACTTCATGCTTTTATCATGCAACTTGAAAC
GAACAACTTGGCCGATATGAACGAGGCACAGAAATACAAGTATTTCTTAC
ACGTCTACTCCAAAACTCACTGTAAGTCACTT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000263_pilon | genome | sc0000263_pilon:162346..166206 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1216-1491:3586 |
| Aaloc | 1000-1212:2943 |
| Aaloc | 880-996:2722 |
| Aaloc | 574-876:1739 |
| Aaloc | 205-570:1190 |
| Aaloc | 109-201:910 |
| Aaloc | 88-105:284 |
| Aaloc | 1-84:1 |
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