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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00015002 ID=TCONS_00015002|Name=TCONS_00015002|organism=Clytia hemisphaerica|type=transcript|length=1510bp
CACAATTCTATATTCCACTATATAAACCAATACGATTAATGAAAAAAACC
CAACTTTATAGTTGGTATACTCGGATAGAGAAGAGAGTTAATTGCGATCG
AGAGTTAGTGGATAGTCGACGGCCAATTACGATCAACCAATAATAAAAAG
ACTCCTTTCTATCTTGTCAAGTAGGAACTTTAACAGCTATAATAACTGGC
CCACAAATTAACGAATAAAGAAAATTCAACCATCTAAATTCGTTCAAAAA
CTAATCGGCAGAAATAAAGCAAAGTTTTGCTGCTAGTACTAAGTATCATC
AAATATCGTTTCACCATTCCATAAGCACAGACCATACATTTCAACCGAAc
tgaatgtttttctttcgaCTTTCTTCCgaattacaaaatttttgaaaagg
aacaCAAAATGAcaataaagaaggatgtcgtcAGTTGGCTTACAAAGTGA
AACAGTGATACTCAGGCCTTAATTTGGGGGCTAAGACAAGACTTAACTCT
ACACAAGATTTATAGgttatttcaacaacaaaaaagaatgTGAAATGTTA
AAACGTATGCTTAAAATTCTAGCATCTCTCTTTAAGAACGAATTGATATA
TTCATGACGAAATATAAAACATGCAAATTCGTATGAACATCTGTTCCGTT
GCACCATCAAAACACGATTCCAACTCAACTACAACCAAGTAAAGTTGACC
AAGCATCTCATCACCTTTAACACCATATAAAAATCACTATCTTTCATAGT
GGAAAAAATCTTTCATAAAACGACAACTGTTCTCTTATTTAGACGGGACA
GCGCCAGCCATTTTTCtgataagaaacatttttttgaaagtacTTTGCTA
ATTGAACATCGTCACGCTGTCAAGTAATAATAAGATGAGACAACATAAAG
CAATCAATAGAATAAAAAGTAAGCTTTCTTTCTTAAATCTGTAACCTCGT
CTTATCAAGCTATTGGAAAGATGATGAATAGGGAAAGCAACCCCCTTCCC
TGGTTCATATTGATTCTTGTAAGCTTCACCGTGTGCAACTTTTTCATTAG
AAACCTATTTCACTATCCCAATACAAAAAGGGATTTTTGACAATGTGATG
ATTTGGCAAACTCCTTCACTTTTAGATTGAAGGCAAAATATTCAAGCTCA
CGTTATCAGATTGTCAATAATATGGCATAAGTATGGCTAAGTCTTGCCAA
AAATGTCAGTAATGTCATGGTTGATGCCTAGGAAAACATGTTCTTACTAC
GAAGGCCTGTTCCACAGACACGATCTGATTTTTATAATCATGGAATTAAA
AATCGATTTGTTTTTTCTCTCAACTCATTGTACTACTTATCGGCTTTTGG
CTCATGTTTTCATGAATTTCTCAATTCATATTTTGTCATTAATCGGCTAC
ATATACTACTACCATTCAGCTGTCTTCCCTTTTAGGAACGCTTGTGTTAA
TTCGACATAGTTTTGCCAGGATCAAATTATGATTATGATGTTTACAACCT
AGAAGAGGAG Run BLAST on NCBI transcript from alignment at sc0000201:314009..315518 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00015002 ID=TCONS_00015002|Name=TCONS_00015002|organism=Clytia hemisphaerica|type=transcript|length=1510bp|location=Sequence derived from alignment at sc0000201:314009..315518 (Clytia hemisphaerica)
CTCCTCTTCTAGGTTGTAAACATCATAATCATAATTTGATCCTGGCAAAA
CTATGTCGAATTAACACAAGCGTTCCTAAAAGGGAAGACAGCTGAATGGT
AGTAGTATATGTAGCCGATTAATGACAAAATATGAATTGAGAAATTCATG
AAAACATGAGCCAAAAGCCGATAAGTAGTACAATGAGTTGAGAGAAAAAA
CAAATCGATTTTTAATTCCATGATTATAAAAATCAGATCGTGTCTGTGGA
ACAGGCCTTCGTAGTAAGAACATGTTTTCCTAGGCATCAACCATGACATT
ACTGACATTTTTGGCAAGACTTAGCCATACTTATGCCATATTATTGACAA
TCTGATAACGTGAGCTTGAATATTTTGCCTTCAATCTAAAAGTGAAGGAG
TTTGCCAAATCATCACATTGTCAAAAATCCCTTTTTGTATTGGGATAGTG
AAATAGGTTTCTAATGAAAAAGTTGCACACGGTGAAGCTTACAAGAATCA
ATATGAACCAGGGAAGGGGGTTGCTTTCCCTATTCATCATCTTTCCAATA
GCTTGATAAGACGAGGTTACAGATTTAAGAAAGAAAGCTTACTTTTTATT
CTATTGATTGCTTTATGTTGTCTCATCTTATTATTACTTGACAGCGTGAC
GATGTTCAATTAGCAAAgtactttcaaaaaaatgtttcttatcaGAAAAA
TGGCTGGCGCTGTCCCGTCTAAATAAGAGAACAGTTGTCGTTTTATGAAA
GATTTTTTCCACTATGAAAGATAGTGATTTTTATATGGTGTTAAAGGTGA
TGAGATGCTTGGTCAACTTTACTTGGTTGTAGTTGAGTTGGAATCGTGTT
TTGATGGTGCAACGGAACAGATGTTCATACGAATTTGCATGTTTTATATT
TCGTCATGAATATATCAATTCGTTCTTAAAGAGAGATGCTAGAATTTTAA
GCATACGTTTTAACATTTCAcattcttttttgttgttgaaataacCTATA
AATCTTGTGTAGAGTTAAGTCTTGTCTTAGCCCCCAAATTAAGGCCTGAG
TATCACTGTTTCACTTTGTAAGCCAACTgacgacatccttctttattgTC
ATTTTGtgttccttttcaaaaattttgtaattcGGAAGAAAGtcgaaaga
aaaacattcagTTCGGTTGAAATGTATGGTCTGTGCTTATGGAATGGTGA
AACGATATTTGATGATACTTAGTACTAGCAGCAAAACTTTGCTTTATTTC
TGCCGATTAGTTTTTGAACGAATTTAGATGGTTGAATTTTCTTTATTCGT
TAATTTGTGGGCCAGTTATTATAGCTGTTAAAGTTCCTACTTGACAAGAT
AGAAAGGAGTCTTTTTATTATTGGTTGATCGTAATTGGCCGTCGACTATC
CACTAACTCTCGATCGCAATTAACTCTCTTCTCTATCCGAGTATACCAAC
TATAAAGTTGGGTTTTTTTCATTAATCGTATTGGTTTATATAGTGGAATA
TAGAATTGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00015002-exon-sc0000201-1491911889:314009..315518 | TCONS_00015002-exon-sc0000201-1491911889:314009..315518 | Clytia hemisphaerica | exon |
| TCONS_00015002-exon-sc0000201-1510915933:314009..315518 | TCONS_00015002-exon-sc0000201-1510915933:314009..315518 | Clytia hemisphaerica | exon |
| TCONS_00015002-exon-sc0000201-1575043694:314009..315518 | TCONS_00015002-exon-sc0000201-1575043694:314009..315518 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000201 | supercontig | sc0000201:314009..315518 . |
Blast
The following BLAST results are available for this feature:
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