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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000024_pilon:157268..158716- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038525 ID=XLOC_038525|Name=XLOC_038525|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1449bp|location=Sequence derived from alignment at sc0000024_pilon:157268..158716- (Clytia hemisphaerica_ch_hm2_pilon)
AAGCTGATGTATCTTTTGCAAGGAGCGTACTTGAAATACTCAGATCGAAC
AAAACCTTCCAAAACCAACACCAGAATGAGTTTATCACTAGTTTTAAATC
GTCTTGCAAACAAAATTACAAAATTGATCATTAGTGGTACATGTGCTAAA
GTCATTTCACAGAACTTGGATTTATTTTTACCAATATTGAAGCAAATTGA
ACAGTTAAGTGTCAATTTGGATATTGGACGTCTGGATGATTTAGATGACC
TTATACATGTTGTTCACGTGGCTAGATATTTTGGTTTAAAGGATGTTAGA
ACGAACTGCTTGTTTCAGAAATTGGCTCTTGCTAAACACGAAATGATCTT
GAAAGCCATTTACGGTGCACTTCCTGAAGATTTATTGAAGAACAAGGATG
GAAATGTTGAAAATGAATTTTTGTATGATTTTCAAATGCTATCAAATGAC
TTGAAAACAAGTGAAACTGGAAAACATATTGGCACCATGGATAATGGTTT
CGACTTCATTGGAAATTATAATTGTTTAGATGAACACTATACTGGTCGTA
AAGCAAAACGTCCGAGATTATTCAACACTGAAAGCAACCAACACCAAGAT
TATATGGAAGAGTTTTATTCTGAACCTTTTCACAAAAATAGTGAAAATGA
AAGCAGTCAAAACATCGACGAGGATTTGTACAATTTTGCTTTGGAACCTG
TTGCCGAGACGATAAGAATCAACACCAAAGTCAACAAGTTGGATATAACG
TTACCACATCTGACAGACATCTATAATAAGGCTTACATACCTGCCCTAAA
GAAATGGCAAAACCTTCAATGTCTATCTTTAGCTAAAATGGTAATTGATA
AATCAGATTTCCAAGATGTTTGCCAAAACTTGGCATTCAGTTTGTGTGAA
CTAACATTGAATGAATTTGATTGTGTTTTACATCAAGATGCAATATGCAA
GTTGACAGGATTGAAGAAATTGAAATTATCTTATTGTGATATTGGTGAAA
GATTTTTTGAAACTTTATTATGCAAATCTGATTGTGTAGGAGAGAAGATT
GATGAAAGTTCTGAAGCACATCCACAGATGATAGTAATTGAAAATAATTT
AAATAGTGAACCAGTTTTCGGATACTTTAAGAACGCAACAAAGAATTCTT
CAGAAAAATCTCTTCATGACGACGGAGTGAATCTCACTGAAAAATCTAGT
AACCTAGAAATTGGAAGTCACCAGAATGATGCCAATGATCAATTTATACA
ACAGGATCTAAAGAAATCAAATCCGGCAATGTCATCATTGTCATTTACCA
ACCTTCGAGTATTGGAGATTATTGGTGAAAATGTTATTTCCAATGATTTG
GTACAAGGATTGAAATATGATGGCTCTTTAGAAGTGTTGTACATCGTTTA
TACAGAGTTTGATGAAGACATTTTGTTGCAATTATTCCAATCTGTTGCC Coding sequence (CDS) from alignment at sc0000024_pilon:157268..158716- >XLOC_038525 ID=XLOC_038525|Name=XLOC_038525|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2898bp|location=Sequence derived from alignment at sc0000024_pilon:157268..158716- (Clytia hemisphaerica_ch_hm2_pilon)
AAGCTGATGTATCTTTTGCAAGGAGCGTACTTGAAATACTCAGATCGAAC
AAAACCTTCCAAAACCAACACCAGAATGAGTTTATCACTAGTTTTAAATC
GTCTTGCAAACAAAATTACAAAATTGATCATTAGTGGTACATGTGCTAAA
GTCATTTCACAGAACTTGGATTTATTTTTACCAATATTGAAGCAAATTGA
ACAGTTAAGTGTCAATTTGGATATTGGACGTCTGGATGATTTAGATGACC
TTATACATGTTGTTCACGTGGCTAGATATTTTGGTTTAAAGGATGTTAGA
ACGAACTGCTTGTTTCAGAAATTGGCTCTTGCTAAACACGAAATGATCTT
GAAAGCCATTTACGGTGCACTTCCTGAAGATTTATTGAAGAACAAGGATG
GAAATGTTGAAAATGAATTTTTGTATGATTTTCAAATGCTATCAAATGAC
TTGAAAACAAGTGAAACTGGAAAACATATTGGCACCATGGATAATGGTTT
CGACTTCATTGGAAATTATAATTGTTTAGATGAACACTATACTGGTCGTA
AAGCAAAACGTCCGAGATTATTCAACACTGAAAGCAACCAACACCAAGAT
TATATGGAAGAGTTTTATTCTGAACCTTTTCACAAAAATAGTGAAAATGA
AAGCAGTCAAAACATCGACGAGGATTTGTACAATTTTGCTTTGGAACCTG
TTGCCGAGACGATAAGAATCAACACCAAAGTCAACAAGTTGGATATAACG
TTACCACATCTGACAGACATCTATAATAAGGCTTACATACCTGCCCTAAA
GAAATGGCAAAACCTTCAATGTCTATCTTTAGCTAAAATGGTAATTGATA
AATCAGATTTCCAAGATGTTTGCCAAAACTTGGCATTCAGTTTGTGTGAA
CTAACATTGAATGAATTTGATTGTGTTTTACATCAAGATGCAATATGCAA
GTTGACAGGATTGAAGAAATTGAAATTATCTTATTGTGATATTGGTGAAA
GATTTTTTGAAACTTTATTATGCAAATCTGATTGTGTAGGAGAGAAGATT
GATGAAAGTTCTGAAGCACATCCACAGATGATAGTAATTGAAAATAATTT
AAATAGTGAACCAGTTTTCGGATACTTTAAGAACGCAACAAAGAATTCTT
CAGAAAAATCTCTTCATGACGACGGAGTGAATCTCACTGAAAAATCTAGT
AACCTAGAAATTGGAAGTCACCAGAATGATGCCAATGATCAATTTATACA
ACAGGATCTAAAGAAATCAAATCCGGCAATGTCATCATTGTCATTTACCA
ACCTTCGAGTATTGGAGATTATTGGTGAAAATGTTATTTCCAATGATTTG
GTACAAGGATTGAAATATGATGGCTCTTTAGAAGTGTTGTACATCGTTTA
TACAGAGTTTGATGAAGACATTTTGTTGCAATTATTCCAATCTGTTGCCA
AGCTGATGTATCTTTTGCAAGGAGCGTACTTGAAATACTCAGATCGAACA
AAACCTTCCAAAACCAACACCAGAATGAGTTTATCACTAGTTTTAAATCG
TCTTGCAAACAAAATTACAAAATTGATCATTAGTGGTACATGTGCTAAAG
TCATTTCACAGAACTTGGATTTATTTTTACCAATATTGAAGCAAATTGAA
CAGTTAAGTGTCAATTTGGATATTGGACGTCTGGATGATTTAGATGACCT
TATACATGTTGTTCACGTGGCTAGATATTTTGGTTTAAAGGATGTTAGAA
CGAACTGCTTGTTTCAGAAATTGGCTCTTGCTAAACACGAAATGATCTTG
AAAGCCATTTACGGTGCACTTCCTGAAGATTTATTGAAGAACAAGGATGG
AAATGTTGAAAATGAATTTTTGTATGATTTTCAAATGCTATCAAATGACT
TGAAAACAAGTGAAACTGGAAAACATATTGGCACCATGGATAATGGTTTC
GACTTCATTGGAAATTATAATTGTTTAGATGAACACTATACTGGTCGTAA
AGCAAAACGTCCGAGATTATTCAACACTGAAAGCAACCAACACCAAGATT
ATATGGAAGAGTTTTATTCTGAACCTTTTCACAAAAATAGTGAAAATGAA
AGCAGTCAAAACATCGACGAGGATTTGTACAATTTTGCTTTGGAACCTGT
TGCCGAGACGATAAGAATCAACACCAAAGTCAACAAGTTGGATATAACGT
TACCACATCTGACAGACATCTATAATAAGGCTTACATACCTGCCCTAAAG
AAATGGCAAAACCTTCAATGTCTATCTTTAGCTAAAATGGTAATTGATAA
ATCAGATTTCCAAGATGTTTGCCAAAACTTGGCATTCAGTTTGTGTGAAC
TAACATTGAATGAATTTGATTGTGTTTTACATCAAGATGCAATATGCAAG
TTGACAGGATTGAAGAAATTGAAATTATCTTATTGTGATATTGGTGAAAG
ATTTTTTGAAACTTTATTATGCAAATCTGATTGTGTAGGAGAGAAGATTG
ATGAAAGTTCTGAAGCACATCCACAGATGATAGTAATTGAAAATAATTTA
AATAGTGAACCAGTTTTCGGATACTTTAAGAACGCAACAAAGAATTCTTC
AGAAAAATCTCTTCATGACGACGGAGTGAATCTCACTGAAAAATCTAGTA
ACCTAGAAATTGGAAGTCACCAGAATGATGCCAATGATCAATTTATACAA
CAGGATCTAAAGAAATCAAATCCGGCAATGTCATCATTGTCATTTACCAA
CCTTCGAGTATTGGAGATTATTGGTGAAAATGTTATTTCCAATGATTTGG
TACAAGGATTGAAATATGATGGCTCTTTAGAAGTGTTGTACATCGTTTAT
ACAGAGTTTGATGAAGACATTTTGTTGCAATTATTCCAATCTGTTGCC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000024_pilon | genome | sc0000024_pilon:157268..158716 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1225-1455:232 |
| Aaloc | 1198-1218:253 |
| Aaloc | 1051-1194:397 |
| Aaloc | 1-1050:1450 |
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