|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000085_pilon:46203..47351+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045463 ID=XLOC_045463|Name=XLOC_045463|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1149bp|location=Sequence derived from alignment at sc0000085_pilon:46203..47351+ (Clytia hemisphaerica_ch_hm2_pilon)
atggcggacgaAATAGCGACAAGTTTGAAACGATTATGGatttttaagaa
aagacgaaattttataattttcttttgtattttctttttcggagccattt
ttattgcacttaatttttatCACTATAAGTTGATGTCTGAGTTTGGGTCG
ACCCTTGATTTCAATGGACATTTATATCAATATGACAACAAAGGAAAAAT
AGAGCTCTCCTCGACATTCGATTTCACCTACAACTTATTATCTTCCTTGA
AAGTATCATTATTGACAAGTTTTAAAAAGAACACAAAAATTATTGAAACA
CCGGTTACGCACTTGGTTCGGAAAAGCCAAGATACGGGAATGTTTTTACA
CAACGATAAAGGACAGCTTCTTTGTGGAACAACGACTCTGAAAGTGTTGA
TACTCGTTTTAAGCGAATACAAAGAACTCGCGTTACGTATGGATATTCGG
AAGACATGGGCGGATAAACACGCCCCAACTGCTAAATATATCAGACAGAA
TAATCAATATAAAGAATTCAAGTGGCGCAAACTGTTCGTGATTAGTCGGG
GTGGAGAAGAATGGGCGGGCGCCTCTTTCGTCGAAACTGAACTTAGAATG
CAACCAGATATATTAGAAGTTGAAATCCAAGAACATCACACAAAGAGGGC
GTTGAAATTATATTCCGCCCTTCGATGGGTACTGAACAATTGTAATTTCA
AATACATCATGTACACAACTGCACACAATTTTGTCAATCTTCCAGCTCTG
TATAACTTTGTATCATCAGATGCTCACAATGAGAGATTTCTGTTTGCTGG
TAGCTTGGCTAAGAAAGAAATCCAGCTTCCTAGTCTAGATCGTTCACAGA
AAAAATATAGGAAAGCAGAATGGGTTGAATATATTCAAGGACGTTCTGCC
ATATTGTCACGTGTCACCTTGGAAACCATAATAAATGATTTATCTTATCT
TAGCAATTTTCGATCACTTAATCAAGACATAATGGTAGCTGCAGCTGCAA
TGGGGTATGGAATACAAGCACAAAATGTAGCAAATTTTACGAAAAAACTT
CCCTGCAAATTTTTATGTtgtgaaaatgacaaaaagtttATACAAAATTA
TGATGCTAGTGAAAAATGTGCTAAAGTATTGTACAGGGATTATAACTAG Coding sequence (CDS) from alignment at sc0000085_pilon:46203..47351+ >XLOC_045463 ID=XLOC_045463|Name=XLOC_045463|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2298bp|location=Sequence derived from alignment at sc0000085_pilon:46203..47351+ (Clytia hemisphaerica_ch_hm2_pilon)
atggcggacgaAATAGCGACAAGTTTGAAACGATTATGGatttttaagaa
aagacgaaattttataattttcttttgtattttctttttcggagccattt
ttattgcacttaatttttatCACTATAAGTTGATGTCTGAGTTTGGGTCG
ACCCTTGATTTCAATGGACATTTATATCAATATGACAACAAAGGAAAAAT
AGAGCTCTCCTCGACATTCGATTTCACCTACAACTTATTATCTTCCTTGA
AAGTATCATTATTGACAAGTTTTAAAAAGAACACAAAAATTATTGAAACA
CCGGTTACGCACTTGGTTCGGAAAAGCCAAGATACGGGAATGTTTTTACA
CAACGATAAAGGACAGCTTCTTTGTGGAACAACGACTCTGAAAGTGTTGA
TACTCGTTTTAAGCGAATACAAAGAACTCGCGTTACGTATGGATATTCGG
AAGACATGGGCGGATAAACACGCCCCAACTGCTAAATATATCAGACAGAA
TAATCAATATAAAGAATTCAAGTGGCGCAAACTGTTCGTGATTAGTCGGG
GTGGAGAAGAATGGGCGGGCGCCTCTTTCGTCGAAACTGAACTTAGAATG
CAACCAGATATATTAGAAGTTGAAATCCAAGAACATCACACAAAGAGGGC
GTTGAAATTATATTCCGCCCTTCGATGGGTACTGAACAATTGTAATTTCA
AATACATCATGTACACAACTGCACACAATTTTGTCAATCTTCCAGCTCTG
TATAACTTTGTATCATCAGATGCTCACAATGAGAGATTTCTGTTTGCTGG
TAGCTTGGCTAAGAAAGAAATCCAGCTTCCTAGTCTAGATCGTTCACAGA
AAAAATATAGGAAAGCAGAATGGGTTGAATATATTCAAGGACGTTCTGCC
ATATTGTCACGTGTCACCTTGGAAACCATAATAAATGATTTATCTTATCT
TAGCAATTTTCGATCACTTAATCAAGACATAATGGTAGCTGCAGCTGCAA
TGGGGTATGGAATACAAGCACAAAATGTAGCAAATTTTACGAAAAAACTT
CCCTGCAAATTTTTATGTtgtgaaaatgacaaaaagtttATACAAAATTA
TGATGCTAGTGAAAAATGTGCTAAAGTATTGTACAGGGATTATAACTAGa
tggcggacgaAATAGCGACAAGTTTGAAACGATTATGGatttttaagaaa
agacgaaattttataattttcttttgtattttctttttcggagccatttt
tattgcacttaatttttatCACTATAAGTTGATGTCTGAGTTTGGGTCGA
CCCTTGATTTCAATGGACATTTATATCAATATGACAACAAAGGAAAAATA
GAGCTCTCCTCGACATTCGATTTCACCTACAACTTATTATCTTCCTTGAA
AGTATCATTATTGACAAGTTTTAAAAAGAACACAAAAATTATTGAAACAC
CGGTTACGCACTTGGTTCGGAAAAGCCAAGATACGGGAATGTTTTTACAC
AACGATAAAGGACAGCTTCTTTGTGGAACAACGACTCTGAAAGTGTTGAT
ACTCGTTTTAAGCGAATACAAAGAACTCGCGTTACGTATGGATATTCGGA
AGACATGGGCGGATAAACACGCCCCAACTGCTAAATATATCAGACAGAAT
AATCAATATAAAGAATTCAAGTGGCGCAAACTGTTCGTGATTAGTCGGGG
TGGAGAAGAATGGGCGGGCGCCTCTTTCGTCGAAACTGAACTTAGAATGC
AACCAGATATATTAGAAGTTGAAATCCAAGAACATCACACAAAGAGGGCG
TTGAAATTATATTCCGCCCTTCGATGGGTACTGAACAATTGTAATTTCAA
ATACATCATGTACACAACTGCACACAATTTTGTCAATCTTCCAGCTCTGT
ATAACTTTGTATCATCAGATGCTCACAATGAGAGATTTCTGTTTGCTGGT
AGCTTGGCTAAGAAAGAAATCCAGCTTCCTAGTCTAGATCGTTCACAGAA
AAAATATAGGAAAGCAGAATGGGTTGAATATATTCAAGGACGTTCTGCCA
TATTGTCACGTGTCACCTTGGAAACCATAATAAATGATTTATCTTATCTT
AGCAATTTTCGATCACTTAATCAAGACATAATGGTAGCTGCAGCTGCAAT
GGGGTATGGAATACAAGCACAAAATGTAGCAAATTTTACGAAAAAACTTC
CCTGCAAATTTTTATGTtgtgaaaatgacaaaaagtttATACAAAATTAT
GATGCTAGTGAAAAATGTGCTAAAGTATTGTACAGGGATTATAACTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000085_pilon | genome | sc0000085_pilon:46203..47351 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-1149:1 |
|
