XLOC_029420 (gene) - C. hemisphaerica

Overview
NameXLOC_029420
Unique NameXLOC_029420
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_105:430954..439573-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_029420 ID=XLOC_029420|Name=XLOC_029420|organism=Clytia hemisphaerica|type=gene|length=8620bp|location=Sequence derived from alignment at scaffold_105:430954..439573- (Clytia hemisphaerica)
ATGATTGGAATGATGGGAACCAAGGTATTTTTTACGAACGGCCTATTCAG CTTTCTTTTGCAGAAAAAATCAGCACATCATGTCTTCATGTTCCTTCAAA ATTTGAAAATGAGTACCGTGAAAAAGGGTAACTTGCATCAGTGGAGGCTA ACATGCATATACCCCAATTCACAGACTTGTCTGGTCATGGTTTTCTCACC TTGTAATATGAAAATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAA AACATGTAATTAATTGAGGAAAGATAATTATAATTACCATGAATTGCGTT TCCCAAATGACCTCACTTTTACACGCTTCATAATCTGACATCTTTGTTAT TTAGAATTTTCAAAAGAATAAGTCGCGATTACGTCATTAGACTAAAATAT GATTGGCTGATAGATGTGAGCCTGGTTTCCCCATCCACTCGGTAAAATAT TCACCACCCTTCAGCCACCCTTGAGAGACAGGGGCAGCAAAAAAAAGTAA GTACGCAACCTTATGGAAACCACCCCATTTTGACATTTTTTTTAAACAAG TGGCGTAAACAGGGGAGAGTGTGCAGAGGAGAGCAGGCAAAAGACATTTA CAATCACGCTCTTCGAAGCTTGTGACATGTTGTCGTGGGAAAAGAAAAGT GATTCTGATCAAAGGTACGTTTTTCTATTGTCAAGTAATTTTGTCATAAT GTTTCCATGTCAACACTTTGAAGAGAAGTAATACTGCTCTAGTTGGTCTG TTAATTGGGGTATATGCATGTTAGCCTCCACTGATGCAAGTTACCCTTTT TCACGGTACTCGCGGGTGAGTTTTTTCAAACTTCTTGCTCGCGGCACGGG GGTTCTAAAATCCAAAGCGCTAGCCACCCGAAACAGCTATCGACCTGGAA TTTTTTGCATCGTCCCCGCAATAGTTTAGCTTTTGAGACGTATATACCAT GTAATTGTTGGTTGGAGCAATGTATATTTTTCAGGAAGTCAAATTATTTA CTTAAAATGCGTTTTTTTCATTGAAAAAATCAAATTTTATTATCGAACGT GAATTTTTTAGAAAGAACAATGTTTTTTCTTTCCAAATGTGAAAAAAGTA AGGATCACACTGTTTCCGGTGGCAAGCGCTAAGGGAAAGATTACGGTGTA ATCACCCCCGTTTCTGACTCGATTCAGCTACATCTACGGAAAATAAAAGT CGCACCAAACCTCCCGCGCGGAATTTTTCATAAAACACTTTTGCTTTTGG TGCACCGTAATGATGGTACAAAATGGCTGGCGATGCGTGCACGAAAATGC TTGAAAAATTGAACTTCAAAATGGAATATCTTTGGAACTTTAAAGAATTG GAAGGTAAATGACCCCTCATTTTTCTTCTGATGGTTATGGCTTTCCATTA AACTTGGTTTGGTATTCTGCAAGTAAGTTTGAAATTTCCGGCGTAAACTT TATCTTAGGAACGGCGTATTGGCGTGAGCTCAATAATTTTAACCTTCCTT GGCGTATCAAATCTGTGAATTTCGGCGTAGGAATCGATTTTGTCCAGTAT ATCTTTTCGCCGCTCCGATTGTTTACACTGCCTTGTTCTTTTTAAAATAA TAATGAGTGTTATTACTTAATTTTAAGTAAAACTTACTTAACCCTTTCCG GACGCACGCGCCACTGGGTGGCCCATGAATCGTGTTCCTATATGACGCAC GGGCCACTGGGTGGCCCATAGCTTTGTAAAAGATTTTAACAGTTTTCGCG CCAAAATAGAATAACATGGTTTTGAATAATGATTTCGAGATAAATTTCCA GTAACTTAACGCTTTTCGATATCTTGTTTACAACAAGAATAAAAACCCCT ATTACATGTGAAAAAAATGAGGTATTACTTATCGTGATATCTTTTATCAA TCACTTTCTATTGCAATTTTAGTGAAGCCAGTCAAAAATGGAATTTTTGT CATATAACCGTGAAGTTATGCGTCCGGTAAGGGTTAAAATCGTCAAAAAC ACTCAGAAATTATCCCAGAAATTGCAAGATGCGCGAAAATTAAAGGATGC GCGAATGTTCTATTTTACGAGCTGCGCGAAAATTAAAGGCGCAAAAATTA GAGGCGGGAAAATTAAGGCAATTAAGGTACATAACCCGATTGGAACGGCT TCAAGAAAGTCATAATGGCAGATAATTTTTAAAATTTCTGATGAGGAAAT GTGTGGAATTTGTGACTCCCCAAGCGATTTGAAGTACATAAAAGTCCGAT CGGTAAAAAGACCGATCTTCTTTGGCCTCTACTCGACCGGTCTTTTTACC TTTTGGGCCGCTCGGATATTGAAGAAGGCCAATGTGAGGCTGCTTATTAA AAGCGGGCTCAGTGAAGCGGCCACATAGTAAGTTTTAAGCCGCTAACAGC AGCCCTTAGCAGTCAATAGCAGACATTAGCGGCCCTTACCTTTGTTTTTC AATTTACTTACATTTTCAAGCACATTTGGAGCAAAGAAAGATTTTTTCAG AAATCAAAAAAGGCAAAACAAAAAAAAAAGATAAAAGGGAGGGCACTCTA AATAAAGAAGAACCTAAGAAGCCATCAAATGTTGTAAAATAAAATAAAAT GAATTGCTTCCCCAGTAGAAGAGAGGGAAAGCTTCCAAAAGGGCATCTCG CAGGCTTTGCTTTCTTATGAGCTCCTGATTTGTCACAAGCTCCTGATCTG TGACCTTTTGAATGTTTGATGCAACTTTTAGAATGCAAGAGAGAGAAAAA GTGAAAATCACGTGAAAAGAAAGAGAACACACTCAGGAGGAGGGTATTTC ATCACTATTTTTGGTAAAAGTTCACGTGATAACACGAAGGAAAGCACGCA GAGGAAGCTCAATGTAAACAAACATTTAGTAAAAGTCTGCACTCTGCTTT GTTCGTCGTGGGTCATGCTGGGCTTGCCTGAACCTCAAGATATTTGGTCT CTCGAGACATTTTTCTTGCTTTCCAATTCTATATTATGATTTGAAAATAA ATGTAAGAGAGCAAAGTATTTCGCTATTCAAAAATACTAGATAAACAAAT TCAGAATCTGTAAGTAGTTATAAGGCAAAAACTTTTTTATTTATTGGTTT ACGGGCCCGCTGATGTTATTTTTGCTTAAATGAAATAAAAATAAAATAGA GATTTCAAAAACCTTTATTTATTTTTTCTCCTCCGACATGCAAAAAAGAG GAAAGAAATAAAAAAACTTTACTTTAAACAGAAAAGAAGNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNTTGTTTAACTGAAAACCATTGTTAAAATGAAAGTAGAGAACA AATAATAAACCATTTCTGCTATTCTTTTTTAAAAGTCTCTTTCTTTTTCC TATAAAATTGCTATTATAATGATTTTTCTTTGTACTGTTTTGAACAGATC AGATTTTTTTTTCAAGACAAATTTTTAGTTTATTTTTAGTCATATATTTT ATCTATAGACTTTATTAATCACTTTAGTACTTCTTTTGTCTTCATTTAAA ATCGATAGGAAATTTCATAAAATTTTATTTTTTTATTTCCTCCGATTTCA GATTCTAAAAAAGAAAATAAAAAAAAGTAAAAAGGTCAATTTTATTTTTA TTTTTTTTCCATCCTCCTCTCCAAAATTTTACCTCAAAAAGCCTGTAAAC CAGAAAATAAAAAAGTAAGTTGCCTAAGAACAATTTTCAAGATAACCCTG TCTCACCACGAACGATCCTTTTGTTAATATCCCCGTCTCAGTCAGTGGAA TTCTTTATTATTATTTTAGACAGTGTAAAATTCTTTATAGCCGAAATTCA GAAAAAATTTCAACCGAATTCCACAAGCTTAAGCCGAATTCAATAATTAC CTTTACCGAATTAGTTAAACTTTTTACCGAAGCGATTCGGTTAAACAGCC GAATTTAATCGAAACCATTTTACCGAAATTCGGTCTTATTTTTGAGAAGA TCCCTTAAGATATAAGCAAAAAAGGATTAATTAATGGAATACAAGGATTA AATAATCTAATATGGGAGATTAAAATAGTCGAATCATTAATCGAACTTCA TAAACGAAAATCAATTATATTTTTGAGAAGATCCCTAAAGAAGGCTGCTA ATAGGCCACTGGCCACTGGCCGCCGATCAAGAAAAAGCCTCTAATAGAGG CCTTGAGGTCGTTCTTGGAAAAATTCCATTCGTCGTTTAATGGCCGATCT TCTAAAATGTTAGGCCGCTTGAAATTTCACTTAGCCCGCTATGAGACCGG TGTTTTACCCGCTTTAGCCGATCGGACTTTAGTGTACTTCAAATCGCTTG GGGAGTCACATTTATCAAATTTATCGATATTGATGGCTTGTTGATTCTTT AAAGAAAAAAGATAACAGGTGTGGCTTTTTCTAATCCTGGAATATCAAAG TTCCAGCTGCACTGTCTTATAACTTTAATTGTTGCAATCGTTGATTCTAA GGGTTGACTTTTTTCTTATCTTTAGTTTTCAAATGAAAGCGGAAATTTGA TGCAGGCGTTGGAAAGTAAGTATCATAGGTAAAAGATGGCTCAAGAAGAT TTTTGCAAAAAATTTTGTTGGCTCAAAAAACGCATGTTTATCTATAAGAA TCACTATTAATAAGCATACATCAATGTTCTTAGTCATATATAGTGATTTT TTTTGTTATGAGATGGATATTTTTTTTTGCTCATGAGGGCTTAATTTTAA AGAACATGTGTGTTTAGACATGAAATTTTGGTTGCTTGGCGCGTTTTTAC TGAAAAACTGTCCAAATTCGACGTTTTTTTATAAGCACACTATCAATTAC TTAGGTATTAGCTCTTTTCGAGATTGGCTCTTTCATTCTTTATGATTTTT TGCACAAAGATGCATAACTATAAACCCTCGAATGTGACAGAGCTCGATTT TTGAAGAAAAAAAAATTTGGGTAAATTTCAGCTAAAAAAACGGTTAAAAA AAGGGTTTTTTGGATTTGTGAAATATTGGATCATTGTTTTTTTGCATGAA AGTAGGTAAAAGATGGCTCAAGCAGATTTTTGTAAAAAAATAATTTTTCT GCTCAAAAAAACGCATCTATTTATCTATAAGAATCATTTTGATGAGATAT ATGGGTAAAGGCCACATTTTTGGTACGCCTGTCCCTTCCATTACATCAAA AAATTTTCATGCCCAAAAAGCTTCAAAACGCATTCTTTTCTGACTCAACA ATACCTATCGCATGAAAATAAACTTTGTGCCCCTCAAAATTTTAGATTGG AAATCTTGTTCAGCCTCAATGTGTCATACACTCACATTTTTAACTTATTT TACGGTAACTGAATCCATTACCATTTGAACTATTTCATTGAGGCTTAAAG TAATAACTTCTTATTAAAAGTAGTGCATTTAGGGTTAGAAATCAGTTGGT ATCATTCTTTAAACTGATTTCCATTCCTTTAACTTGGTATGCACCATTTT GCATAATGGAAGGGACAAAATTTCATGCTTAAGTTCCACTTTTTGCCACA TTTTGGTCTAAAATTGACCATAAAATAGCATCTTCTGCGTGAATTATCTT GAGTTAGGTATTGAAATCAGCTATACCCGTTTAAAAGTCTTACATATAGT TTTTTGAGAGCTTTCGAATGGTATACTTGATGTCTGAAATGTCTGAAAAT GAGTTTGAAATTCTCAAAAAATTTCGCCCTTAGGGTTTTGCCTGGGGAAA AAAGAAATGTCCCAAAAAAGGGATGTTCCACCAGTGGGATTTTAGGGGAT TTTTTCCTGAGGCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNGGATTTTTTCCTGAGGCATAACCATCC TATAGAGAAGGTCTGGAGAAAGTTTCAGCTAGATCTTATTTTTTTCCCGT AAATTATGCTAAACGACCCCACTAAGATAAAACAAAAATAAATACAAACT AAAACATGCAACAGCAAGCTAATTGCGCTTCGATTTGTTAGGCCTTTATT ACATGGAAAAGTAAAAATAATTATGCACATGTAAATGAGTCAGTATTTAA GGTCCAGTAGAATTTCTGGGAAACAGCCTATCTGGCAGTGTGCGGATCTA GGGGGTGTCTTTTCCCCGTAGGTTTTTTTCTTGGGTATTTTATGTTCTTA TGTATGTATGTTCTTCAAATTAGTATTTAAGGTTGGCTAAGGTCAAATTT TTTCATCTATGGCTCAAATTTAGGTATTTTTATAGTTTTTGAAAATGTTA ATTTCATCAGAAAGAGCCAGTTTACTTTTTCACAAATCTTTTTAGAAATT TTGCGGGGCATTTTTTTGCTTGTGAGTCAGGTAAATGATCAAGTGTATTC ACAACATTAATCTTTTGATACACATTTTGGCAGGACTCTAGTGCATAGTT TGCAGAGGGGTATGAACTTAGGTTTATTTTATCCCCTATATAACCATCTT CCCCGCACATACAGTTGGTCATTTACCTTGAGTACCCCCTTTCTGGATCT TCAGGTGGGTCTATTCAGCATGTAGCTTGTTCTTTGGTAAAACATTGCTT TTAAATCACTGGAAAATTGTGATGGAAATTTTGCTATATTGTTGTACAAT AGACGATATCGGCTTAACGTGAAAACTCAGGTTTGACCTCCGAGAATTGC CCACAATGCTTTGCGCGGAAGAAAGTTCAAGGTGAATTTTTTCCCGCACA AAGCATTGTAGGGAATTCTTGGAGGTCAAATCCAAGTTTTCACGATAAGC CAGTATCGTCTATTGAAAAGATATTTCCTTTTAGGGCTAGAGAAAACTGA CAACATGAAGAAGTCAGTAACATGTATAGCCCCTATCAACATTGCAGTCA TCAAATATTGGGGCAAATCTGATGAAAGTTTAAACATCCCATTGAACTCT TCTCTCAGTATAACTCTTGCTACTGAAGATTTATGCACAGAAACTCAAGT TTCTTTTGATGATAGCTTGGGATCAGATGAGCTTTGGTTGAATGGGAAAC AAGAGGATATCACACTCAACAAAAGAATAATACGTGTTTTAAAAGAAGTT CGTAAAATCTTTTTTGAACAAAATAACAATAAATCCTTTGAAAAAGATAT CTCAAAACTACCAATCAAAATCAGTTCTGTCAACAATTTTCCAACAGCTG CAGGACTTGCCTCCTCAGCTTCAGGTTATGCATGTCTTGCCAAATGTTTG GGAAAGTTATTTGATTTGAGAATCAAACTCTCTTACCTTGCAAGACTTGG TTCAGGTAGTGCTTCCAGAAGCATTGATGGCGGTTTTGTGAAATGGATGA AAGGAAACTGCTTGAAAGGAACGGACAGTGTGGCCCACCAAATTGCTACA GAAAATCATTGGGAAGACTTGAAATGTGTTATCTTAGTGGTAAGCAATAA ACAAAAGTCAGTGCCAAGCACCCAAGGAATGAGAAATAGCGTAGAAACAA GTGAACTTTTGAAATTGAGAGTTCAAAACATTGTTGAACCAAGACTGGCT GCAATGGAGCAAGCTATCAAAGACAAAAACTTTGAGAATTTTGCAGCACT TACAATGAAAGATAGTAATCAATTGCACGCAATATGTCAAGACACATACC CTCCTATTACTCCTCCCTATCTTAACGCAACTTCACACAAGATCATCAAA CTTATCACAGATTACAATAAGAATGGAATAAAAGCTGCATATACCTTTGA TGCTGGAGCAAACGCTTTCCTTTTTACGTTGAAAGAAAGTTTACATGAGC TCCTTGCTACATTATTCAAATATTTCCCAATGGAAGAGGGTTGTATAAAT CTTTTGACTGAAGAATTAAAGAAAATTGATGGTAAAAGTTGCAATTTAGA TGAAATAACGCCTTCCCATAATGCAATTGAAAGAATCATTTTAACCAAAC CTGGCAAAGGAGCTACAGTGATAATGTCGGAAGATTTTTCTTGAATAAAC CTATAGTTTTACATTTTAGTTTTTTTGCTGCATTGAATATTTTTTATACA TAAAATTTCATAAAAAAAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00046069TCONS_00046069Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00046069-proteinTCONS_00046069-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_105supercontigscaffold_105:430954..439573 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
MVDPREDICTED: diphosphomevalonate decarboxylase isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
46.28 43.25 30.19 30.55 6.87 4.96 8.29 8.74 8.65 6.2 6.46 8.57 13.36 17.32 14.07 15.2 9.98 13.19 7.93 5.48 8.26 6.97 40.33 33.85 7.72 9.61 5.28 7.16 15.55 19.39