TCONS_00046069-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00046069-protein
Unique NameTCONS_00046069-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length393

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00046069-protein ID=TCONS_00046069-protein|Name=TCONS_00046069-protein|organism=Clytia hemisphaerica|type=polypeptide|length=393bp
DWNDGNQGLEKTDNMKKSVTCIAPINIAVIKYWGKSDESLNIPLNSSLSI
TLATEDLCTETQVSFDDSLGSDELWLNGKQEDITLNKRIIRVLKEVRKIF
FEQNNNKSFEKDISKLPIKISSVNNFPTAAGLASSASGYACLAKCLGKLF
DLRIKLSYLARLGSGSASRSIDGGFVKWMKGNCLKGTDSVAHQIATENHW
EDLKCVILVVSNKQKSVPSTQGMRNSVETSELLKLRVQNIVEPRLAAMEQ
AIKDKNFENFAALTMKDSNQLHAICQDTYPPITPPYLNATSHKIIKLITD
YNKNGIKAAYTFDAGANAFLFTLKESLHELLATLFKYFPMEEGCINLLTE
ELKKIDGKSCNLDEITPSHNAIERIILTKPGKGATVIMSEDFS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_029420XLOC_029420Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00046069TCONS_00046069Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013750GHMP_kinase_C_dom
IPR006204GHMP_kinase_N_dom
IPR014721Ribosomal_S5_D2-typ_fold_subgr
IPR005935Mev_decarb
IPR029765Mev_diP_decarb
IPR020568Ribosomal_S5_D2-typ_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0016831carboxy-lyase activity
GO:0004163diphosphomevalonate decarboxylase activity
Vocabulary: Biological Process
TermDefinition
GO:0008299isoprenoid biosynthetic process
GO:0019287isopentenyl diphosphate biosynthetic process, mevalonate pathway
Vocabulary: Cellular Component
TermDefinition
GO:0005829cytosol
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0019287 isopentenyl diphosphate biosynthetic process, mevalonate pathway
biological_process GO:0008299 isoprenoid biosynthetic process
cellular_component GO:0005829 cytosol
molecular_function GO:0005524 ATP binding
molecular_function GO:0016831 carboxy-lyase activity
molecular_function GO:0004163 diphosphomevalonate decarboxylase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013750GHMP kinase, C-terminal domainGENE3D3.30.70.890coord: 201..386
e-value: 8.4E-65
score: 217.8
IPR013750GHMP kinase, C-terminal domainSUPERFAMILY55060GHMP Kinase, C-terminal domaincoord: 203..384
IPR006204GHMP kinase N-terminal domainPFAMPF00288GHMP_kinases_Ncoord: 120..160
e-value: 2.7E-6
score: 27.4
IPR014721Ribosomal protein S5 domain 2-type fold, subgroupGENE3D3.30.230.10coord: 14..200
e-value: 4.6E-56
score: 188.8
IPR005935Diphosphomevalonate/phosphomevalonate decarboxylasePIRSFPIRSF015950Mev_P_decrbxcoord: 10..392
e-value: 3.7E-114
score: 379.3
IPR029765Diphosphomevalonate decarboxylaseTIGRFAMTIGR01240TIGR01240coord: 21..338
e-value: 2.9E-94
score: 313.5
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 17..196

Blast
[Close]
BLAST of TCONS_00046069-protein vs. Swiss-Prot (Human)
Match: MVD1 (Diphosphomevalonate decarboxylase OS=Homo sapiens GN=MVD PE=1 SV=1)

HSP 1 Score: 306.605 bits (784), Expect = 1.398e-101
Identity = 171/377 (45.36%), Postives = 241/377 (63.93%), Query Frame = 0 
Query:   18 SVTCIAPINIAVIKYWGKSDESLNIPLNSSLSITLATEDLCTETQVSFDDSLGSDELWLNGKQEDITLNKRIIRVLKEVRKIFFEQNNNKSFEKDISKLPIKI--SSVNNFPTAAGLASSASGYACLAKCLGKLFDLRIKLSYLARLGSGSASRSIDGGFVKWMKGNCLKGTDSVAHQIATENHWEDLKCVILVVSNKQKSVPSTQGMRNSVETSELLKLRVQNIVEPRLAAMEQAIKDKNFENFAALTMKDSNQLHAICQDTYPPITPPYLNATSHKIIKLITDYNKN--GIKAAYTFDAGANAFLFTLKESLHELLATLFKYFPMEEGCINLLTEELKKIDGKSCNLD---EITPSHNAIERIILTKPGKGATVI 387
            +VTC AP+NIAVIKYWGK DE L +P+NSSLS+TL  + L T T          D +WLNG++ED+    R+   L+E+R +  ++ N++  +   S L  K+  +SVNNFPTAAGLASSA+GYACLA  L +++ +   LS +AR GSGSA RS+ GGFV+W  G    G DS+A Q+A E+HW +L+ +ILVVS ++K   ST GMR SVETS LL+ R +++V  R+A M + I++++F +FA LTMKDSNQ HA C DT+PPI+  YLNA S +II L+  +N +    K AYTFDAG NA +FTL +++ E +A ++  FP        L     +    S  L     + P+   ++ II+T+ G G  ++
Sbjct:    9 AVTCTAPVNIAVIKYWGKRDEELVLPINSSLSVTLHQDQLKTTTTAVISKDFTEDRIWLNGREEDVG-QPRLQACLREIRCLARKRRNSRDGDPLPSSLSCKVHVASVNNFPTAAGLASSAAGYACLAYTLARVYGVESDLSEVARRGSGSACRSLYGGFVEWQMGEQADGKDSIARQVAPESHWPELRVLILVVSAEKKLTGSTVGMRASVETSPLLRFRAESVVPARMAEMARCIRERDFPSFAQLTMKDSNQFHATCLDTFPPIS--YLNAISWRIIHLVHRFNAHHGDTKVAYTFDAGPNAVIFTLDDTVAEFVAAVWHGFPPGSNGDTFLKGLQVRPAPLSAELQAALAMEPTPGGVKYIIVTQVGPGPQIL 382
The following BLAST results are available for this feature:
BLAST of TCONS_00046069-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MVD11.398e-10145.36Diphosphomevalonate decarboxylase OS=Homo sapiens ... [more]
back to top