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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000303_pilon:200805..202604- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_015196 ID=XLOC_015196|Name=XLOC_015196|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1800bp|location=Sequence derived from alignment at sc0000303_pilon:200805..202604- (Clytia hemisphaerica_ch_hm2_pilon)
CCAACGATGTATAAATATCTATAGGTTGTAAAGGATTTTCAAAACTCGCA
GAAACTTTTTACTATCAATGGAAAAATGTCAAAACCAGAGATAATTACAG
AATTCTCCAATCACTTCAACTCTGTCTTAAATAAACCCGGAATCGAAACT
GTAGACAATACAAAAAGCAATGAACAACTAAGAGAAATTCTTAACCACCT
TCCATCAAGTGAGACCGTCTATGTTTCTCAATCTGAAGTAGAGGAAGCCA
TTGGTCAACTGAACAAGGATAAGACTCCAGACCCCTTCCATATACTTAGT
GAACATTTTATTTATGCAATGAGTAAGGAATTCCTACAACATATTACTTA
CCTCATCAACCGTATCTTCTCCGGTGATATCGCATCGTCACTTAGTTTAT
CAGTCATTATCCCTCTAGTTAAATCAAACAACAAATCGCTAAAGGACCCA
AATAACTATCGGGGGATCAGTATTATACCAACCCTTTCCAAGCTGCTGGA
AGTCATCATCATTGATAAATGCCCAACGCTGAAATCTACACATCCCTCCC
AATTTGGTTTTACTAACCATTCATCTACCGTGCATGCTGAACTACTACTT
CAGGACACAATCAAATACTACAATCAGAACAGATCACCATTGTATATATG
TAGTTTGGATGTAGCTAAGGCGTTCGATAGCTGCAACTGGAATACCCTAT
TTACCAAACTTCTAAATCGTGAATTGACTCCAAAACCTATTCTCAAGTAC
CTAATATCCTCCTACTTGAATAGTGAGTCATTGGTTGCTTATGGAGGTTT
GAAATCTAATTCATTCAAGCTGTCACAAGGTGTCAAACAAGGATCCATCA
TATCGCCCTATCTGTTTAACCTATATACAGAGGATCTTCTCTCAGAGATC
AGACATTCTAATCATGGAACATATCTTCCAGACGGAACCAGCATGTCAGT
TGTTGCGTTTGCCGACGACCTCATTCTCATTAGCCCAACACTTTGTGGTC
TACAACAACTCATAGACACATGTGTACGCTATGGTCGTTCTCATAATCTG
AAATTCAATACTACAAAGACTCAGTACTTGATATCAGGTACCAGTGCTCT
ACCCGACAAATCAATCATCCTGGATGGCGAACAGATTGAGCCACAAGATA
AACTCAAGCATCTTGGTTTCTTATGGAAAAAGTCTATCAGCATTCTCCAA
CTTCACAGTCACTTGGACTATCGTATATCGGAAATGTGGTCTGTCACTTC
CTCGCTTATATCTGGTGGAGTGAGGTACCTCCATCCAAACCAAATTATCG
ATATCTACAAAACCCTAGTGATTCCAAAACTCCTCTATGGTCTCGAATTG
ATCAAGTTTAAGAACTGCCACTGGGATCAAATCAACAGACAATCAAGGTG
TGCTCTGAAAGCCATGCTTGGTGTATCCAAACACGCAAAAAACCATCTTC
ATCAGCTCTATAAAATATCTGATATCAAAGTTATCTTATACAATCGAAAA
ATGAACCTGGTGAATCAAATGTTAGTAAATGTTAATACTCGTGATTATGC
CTTGTCAGTTATGGCACTTGATAAGAATGATCGTACTTATTCAGTAGTGG
ATGAGATCAATGATATATGTTTGGAAAATAACATCAATTTTCTAGACTGT
ATACTGAATAGAAAATGTCATCGAATCAAATCCTTTTTTCCTTCAGAATC
GGAGGAACAACTTGAGCTTAAGAACTGCATTGAGAACTGGTACAACCCTG
ATCTCAGGGTTAAATTTAGAACAATATTGGAATCTGCCATACCAAGATAA
Coding sequence (CDS) from alignment at sc0000303_pilon:200805..202604- >XLOC_015196 ID=XLOC_015196|Name=XLOC_015196|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3600bp|location=Sequence derived from alignment at sc0000303_pilon:200805..202604- (Clytia hemisphaerica_ch_hm2_pilon)
CCAACGATGTATAAATATCTATAGGTTGTAAAGGATTTTCAAAACTCGCA
GAAACTTTTTACTATCAATGGAAAAATGTCAAAACCAGAGATAATTACAG
AATTCTCCAATCACTTCAACTCTGTCTTAAATAAACCCGGAATCGAAACT
GTAGACAATACAAAAAGCAATGAACAACTAAGAGAAATTCTTAACCACCT
TCCATCAAGTGAGACCGTCTATGTTTCTCAATCTGAAGTAGAGGAAGCCA
TTGGTCAACTGAACAAGGATAAGACTCCAGACCCCTTCCATATACTTAGT
GAACATTTTATTTATGCAATGAGTAAGGAATTCCTACAACATATTACTTA
CCTCATCAACCGTATCTTCTCCGGTGATATCGCATCGTCACTTAGTTTAT
CAGTCATTATCCCTCTAGTTAAATCAAACAACAAATCGCTAAAGGACCCA
AATAACTATCGGGGGATCAGTATTATACCAACCCTTTCCAAGCTGCTGGA
AGTCATCATCATTGATAAATGCCCAACGCTGAAATCTACACATCCCTCCC
AATTTGGTTTTACTAACCATTCATCTACCGTGCATGCTGAACTACTACTT
CAGGACACAATCAAATACTACAATCAGAACAGATCACCATTGTATATATG
TAGTTTGGATGTAGCTAAGGCGTTCGATAGCTGCAACTGGAATACCCTAT
TTACCAAACTTCTAAATCGTGAATTGACTCCAAAACCTATTCTCAAGTAC
CTAATATCCTCCTACTTGAATAGTGAGTCATTGGTTGCTTATGGAGGTTT
GAAATCTAATTCATTCAAGCTGTCACAAGGTGTCAAACAAGGATCCATCA
TATCGCCCTATCTGTTTAACCTATATACAGAGGATCTTCTCTCAGAGATC
AGACATTCTAATCATGGAACATATCTTCCAGACGGAACCAGCATGTCAGT
TGTTGCGTTTGCCGACGACCTCATTCTCATTAGCCCAACACTTTGTGGTC
TACAACAACTCATAGACACATGTGTACGCTATGGTCGTTCTCATAATCTG
AAATTCAATACTACAAAGACTCAGTACTTGATATCAGGTACCAGTGCTCT
ACCCGACAAATCAATCATCCTGGATGGCGAACAGATTGAGCCACAAGATA
AACTCAAGCATCTTGGTTTCTTATGGAAAAAGTCTATCAGCATTCTCCAA
CTTCACAGTCACTTGGACTATCGTATATCGGAAATGTGGTCTGTCACTTC
CTCGCTTATATCTGGTGGAGTGAGGTACCTCCATCCAAACCAAATTATCG
ATATCTACAAAACCCTAGTGATTCCAAAACTCCTCTATGGTCTCGAATTG
ATCAAGTTTAAGAACTGCCACTGGGATCAAATCAACAGACAATCAAGGTG
TGCTCTGAAAGCCATGCTTGGTGTATCCAAACACGCAAAAAACCATCTTC
ATCAGCTCTATAAAATATCTGATATCAAAGTTATCTTATACAATCGAAAA
ATGAACCTGGTGAATCAAATGTTAGTAAATGTTAATACTCGTGATTATGC
CTTGTCAGTTATGGCACTTGATAAGAATGATCGTACTTATTCAGTAGTGG
ATGAGATCAATGATATATGTTTGGAAAATAACATCAATTTTCTAGACTGT
ATACTGAATAGAAAATGTCATCGAATCAAATCCTTTTTTCCTTCAGAATC
GGAGGAACAACTTGAGCTTAAGAACTGCATTGAGAACTGGTACAACCCTG
ATCTCAGGGTTAAATTTAGAACAATATTGGAATCTGCCATACCAAGATAA
CCAACGATGTATAAATATCTATAGGTTGTAAAGGATTTTCAAAACTCGCA
GAAACTTTTTACTATCAATGGAAAAATGTCAAAACCAGAGATAATTACAG
AATTCTCCAATCACTTCAACTCTGTCTTAAATAAACCCGGAATCGAAACT
GTAGACAATACAAAAAGCAATGAACAACTAAGAGAAATTCTTAACCACCT
TCCATCAAGTGAGACCGTCTATGTTTCTCAATCTGAAGTAGAGGAAGCCA
TTGGTCAACTGAACAAGGATAAGACTCCAGACCCCTTCCATATACTTAGT
GAACATTTTATTTATGCAATGAGTAAGGAATTCCTACAACATATTACTTA
CCTCATCAACCGTATCTTCTCCGGTGATATCGCATCGTCACTTAGTTTAT
CAGTCATTATCCCTCTAGTTAAATCAAACAACAAATCGCTAAAGGACCCA
AATAACTATCGGGGGATCAGTATTATACCAACCCTTTCCAAGCTGCTGGA
AGTCATCATCATTGATAAATGCCCAACGCTGAAATCTACACATCCCTCCC
AATTTGGTTTTACTAACCATTCATCTACCGTGCATGCTGAACTACTACTT
CAGGACACAATCAAATACTACAATCAGAACAGATCACCATTGTATATATG
TAGTTTGGATGTAGCTAAGGCGTTCGATAGCTGCAACTGGAATACCCTAT
TTACCAAACTTCTAAATCGTGAATTGACTCCAAAACCTATTCTCAAGTAC
CTAATATCCTCCTACTTGAATAGTGAGTCATTGGTTGCTTATGGAGGTTT
GAAATCTAATTCATTCAAGCTGTCACAAGGTGTCAAACAAGGATCCATCA
TATCGCCCTATCTGTTTAACCTATATACAGAGGATCTTCTCTCAGAGATC
AGACATTCTAATCATGGAACATATCTTCCAGACGGAACCAGCATGTCAGT
TGTTGCGTTTGCCGACGACCTCATTCTCATTAGCCCAACACTTTGTGGTC
TACAACAACTCATAGACACATGTGTACGCTATGGTCGTTCTCATAATCTG
AAATTCAATACTACAAAGACTCAGTACTTGATATCAGGTACCAGTGCTCT
ACCCGACAAATCAATCATCCTGGATGGCGAACAGATTGAGCCACAAGATA
AACTCAAGCATCTTGGTTTCTTATGGAAAAAGTCTATCAGCATTCTCCAA
CTTCACAGTCACTTGGACTATCGTATATCGGAAATGTGGTCTGTCACTTC
CTCGCTTATATCTGGTGGAGTGAGGTACCTCCATCCAAACCAAATTATCG
ATATCTACAAAACCCTAGTGATTCCAAAACTCCTCTATGGTCTCGAATTG
ATCAAGTTTAAGAACTGCCACTGGGATCAAATCAACAGACAATCAAGGTG
TGCTCTGAAAGCCATGCTTGGTGTATCCAAACACGCAAAAAACCATCTTC
ATCAGCTCTATAAAATATCTGATATCAAAGTTATCTTATACAATCGAAAA
ATGAACCTGGTGAATCAAATGTTAGTAAATGTTAATACTCGTGATTATGC
CTTGTCAGTTATGGCACTTGATAAGAATGATCGTACTTATTCAGTAGTGG
ATGAGATCAATGATATATGTTTGGAAAATAACATCAATTTTCTAGACTGT
ATACTGAATAGAAAATGTCATCGAATCAAATCCTTTTTTCCTTCAGAATC
GGAGGAACAACTTGAGCTTAAGAACTGCATTGAGAACTGGTACAACCCTG
ATCTCAGGGTTAAATTTAGAACAATATTGGAATCTGCCATACCAAGATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000303_pilon | genome | sc0000303_pilon:200805..202604 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 550-2349:1801 |
|
