XLOC_030540 (mRNA) -

Overview
NameXLOC_030540
Unique NameXLOC_030540
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000259_pilon:479541..480282-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030540 ID=XLOC_030540|Name=XLOC_030540|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=742bp|location=Sequence derived from alignment at sc0000259_pilon:479541..480282- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCAAAGAAATCTGAAGTTGTAAGTAATACTTGATACTTTAAATTAAG AATACATTTCTTTATCCCCGATTGAAATCTAGACAAGCAAATTAAAAATA AATCTATTAATTACATCTCCTGAAATTAGTTCTACTTGGTCTAAAATGCC GTTTTTTTAAATGTAATCTAATATAATCAACTTTAATTTTAGGAATCACT TGGATTGCTATTCAAATGCGAAACGAAGACATCCGAAATGATCCAGATAT TAGAAAATCTGCAAGAAAATTATGTCCCCAAAAGTGAAAAAGACGAGAAA GGCTTATGTGACACGTTTGTTGACATCCCATTTGGAGGCGACCAGTTAAC AGAGGAGAGAGCAGTCAACTCTCAGAAAGCACGCCTAGATGGAGAAAATG ATTTGGAAAAATTGAAAGGATTGTCCCCTAAGTTTGAAGATTGGCATGCT AAAAAATGTCTTTACGAGGTAAAAAAACTACTCTCTAACATACATACTAT CTAAAAAAAATTCTAAAAACAGAAATATTTTAATCAGACATATGATAAAT AAGTATTTAAAAATGTCAGAAATTTGTATCTTGTATTACTAGGTGAAGGA TGGTGTGTTTCGTGATAAAGGCTCTGGAAATGAAGCTGGTACGACGGCGT GGGCTTTAAACTTTTTACACAAAACGAACGCAAAACCTGGCCCAGACAAA GCATTCAATCACTATAAAGATTTTACTGATGTTGAGTTAGAT

Coding sequence (CDS) from alignment at sc0000259_pilon:479541..480282-

>XLOC_030540 ID=XLOC_030540|Name=XLOC_030540|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=894bp|location=Sequence derived from alignment at sc0000259_pilon:479541..480282- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCAAAGAAATCTGAAGTTATGTCAAAGAAATCTGAAGTTGAATCACT
TGGATTGCTATTCAAATGCGAAACGAAGACATCCGAAATGATCCAGATAT
TAGAAAATCTGCAAGAAAATTATGTCCCCAAAAGTGAAAAAGACGAGAAA
GGCTTATGTGACACGTTTGTTGACATCCCATTTGGAGGCGACCAGTTAAC
AGAGGAGAGAGCAGTCAACTCTCAGAAAGCACGCCTAGATGGAGAAAATG
ATTTGGAAAAATTGAAAGGATTGTCCCCTAAGTTTGAAGATTGGCATGCT
AAAAAATGTCTTTACGAGGAATCACTTGGATTGCTATTCAAATGCGAAAC
GAAGACATCCGAAATGATCCAGATATTAGAAAATCTGCAAGAAAATTATG
TCCCCAAAAGTGAAAAAGACGAGAAAGGCTTATGTGACACGTTTGTTGAC
ATCCCATTTGGAGGCGACCAGTTAACAGAGGAGAGAGCAGTCAACTCTCA
GAAAGCACGCCTAGATGGAGAAAATGATTTGGAAAAATTGAAAGGATTGT
CCCCTAAGTTTGAAGATTGGCATGCTAAAAAATGTCTTTACGAGGTGAAG
GATGGTGTGTTTCGTGATAAAGGCTCTGGAAATGAAGCTGGTACGACGGC
GTGGGCTTTAAACTTTTTACACAAAACGAACGCAAAACCTGGCCCAGACA
AAGCATTCAATCACTATAAAGATTTTACTGATGTTGAGTTAGATGTGAAG
GATGGTGTGTTTCGTGATAAAGGCTCTGGAAATGAAGCTGGTACGACGGC
GTGGGCTTTAAACTTTTTACACAAAACGAACGCAAAACCTGGCCCAGACA
AAGCATTCAATCACTATAAAGATTTTACTGATGTTGAGTTAGAT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_030540XLOC_030540-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000259_pilongenomesc0000259_pilon:479541..480282 -
Properties
Property NameValue
Aaloc298-447:151
Aaloc22-297:551
Aaloc1-21:743