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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000016_pilon:2318666..2321518+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040979 ID=XLOC_040979|Name=XLOC_040979|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2853bp|location=Sequence derived from alignment at sc0000016_pilon:2318666..2321518+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTAATGTAGATAATGATCATTCTGGAAGCAATTACACTTACtacaa
tcaaaacattgaattacCACGCGTAAGTAGTATTCCTTCATCACCTCGGG
AAGAAAATCATCGTACAGAATTAGTCAAgaataatacattttttacCCAA
GAAGATGGAGCTATTCAACAAAATGATTCCTTTTCTGGAGTCTCAAATGT
TATCGAATCTCTTAATAATTATGTTAGACCCataaatgatgataaaaacg
atgaggatgatgataaaacagttgatgatacagatgaCAAACCATTATTT
GTTCCATGCCCTCCATCAAAGCCAAAACCAAGTGGACGAATAGTTAGGGC
ACAAGTTCATCCAAAGCCTAGACATCAGCCAAGAGAAGACCAATCTTTTG
CCATTAAGGAAGAAGATTTATCTTTTAACAATCGTTTACCAACTCTTTca
aatgatgattttgatttaaaCAAGCCATCTTCAAAAAACTtgcaagaaaa
aaatcaaagtagCACACCACGTATCAAGTCCGACAGTTCAATAAACAAAT
CACATGACAAGAAGAACAATATATCAAGAGATCAGAGGCTCATTAATCAG
TATACAGAATTACTAAATGAAAGGTTCAGAGATTTTTCTTCGGAATCTGA
GACCGAAGGAAAAGATTTTACAGTATCAGTAAGCAGTCTTAGCAGTGATG
AAGATACTTATGATAATactgatgatgaagatgaaaatcagCTTGAAGGG
CAAACACTTACGCaagaaaaatttgagccattATACAGTTTAcccattaa
aaaatcaaaaaaattgacaagaaCAGCTTTAACAGTATACTTATTTCTAA
TTCAAATATGGGTGGAAGTCTACACCGGACAGGATCTTTGCCAGATCTAA
GGTCAATTGCTGATATGAGCTTGAAAAAAGTAAGTCATGTAAGCAAAAAT
GAGTCCGAAGCTGAGAGTGAACCAGGAGCAAAAATAGGATATAAGTTCAA
ACCACTACCACCAATTCCTGGAACATCGTCAAATATAAACAATACTGGGT
TGTATGAAACAATTGATGGgttatcaaaactttcaaaaaatgcagttacC
AAAACTGAGAGTATTGAGTCAAATAAACGGAAAACATTTAAAGAGATTGC
CACGATATTAACTTTAGTGCCAAGGTTGACAACAAATTCTGTTAGAAGCC
GAAAGAATGATCATAGACTAGCTGAAATTAGCAATTATCTTCCCGATAAA
AAGTTGAAGATATTTGTTGGTACCTGGAATATGAAAGGGACTAAGGTATG
GATATGATAcaaaagatgctttttttgGTTTCTTCTGTTTACAGTTCCCT
TAATTGACAAATTTTGCTATATAATGATATTATCTTGGCTATTATTTTTA
GGTAGTGTGATTTTGTGGTTATTCTCTCCAATGACATAAATTTTAATATT
CTCTGTCATAAATTTTGCACGTGTTACACCATGCTCATAACagcgtttct
ttttttatatctcATGTTTGGAAAATAAGCTTTGATATTAATCTCAATTA
TTTACTCTGTAATTTGTACAAGTTGATTATGAGATTATCAgatattgttt
ttttgtttttagtttttaccTTCATCACTGGACGATTTTTTGCTACCACC
TGAAAGTATTTATTTACAAGATGTCTATGTCATTGGAACTCAAGAAGGAA
CACCATTCAGGTAAGGTGGTTTCATCAGAAATTAACATAAAATGAAAGAC
ATTATAAGTATGATTCTCATGGCaatcaggccatttttcatacCTTTTTA
GCGTCAGGTTATCCGGAGTTGACCTTCTTGAATTATGAAAATAagggtaa
aaacagcctttcttatgaaaaaaaaacagcagaaaaagtgcactttttgG
TCTCTATCtgacgctgccctgcctttctagaATTCGGCCTGGCAATACTC
TtgtattttttaggaaatttttttcaactgtttCATaaaaaaaGCTATTG
TACCAGCTTTAGCGCAACAAAGAGTAGTTAtgaatcttcttttttttaat
tttaggagaGAGTGGCAAGTTAGGTTGCAAGAAACCTTTGGACCTTCGCA
TGTTTTGATGCAATCAagtaattttggtgttttgcaGCTATCCATTTTCG
TAAGAAGGGAGTTGGTTTGGTTTTGCTCTAGTAAGTTTCCTCAGCACGtc
tttgtttcaatattttaaagggataatcagatttgagatatttagattac
aGAAACGTTCTTACagggttcttacgttgaaattctattgctttcatcct
aaaagccaaaaacttgtaacttaaatatctcgactttggaaaataattag
gcaaaaacattttgagattttggcCAGGACACTAGAAGAATCCCAAATAC
CAAGTATTACAatccatctgattatcccttttgtTTGCCTTTAAATTGAA
GTCATTTAATTATCCCTTTATttgcattattttttgcgttaaaagtttca
aaatttgaaattataatttttctaaatcatATTAATTTATTATCATATCA
ATTTCAGGCGTTGAACAAGATACAATAGCAACGCGTGTTGGacataaaat
caaaactaaGGTTCGTCATCATCTTTTATTAACTaaaaaaaGTTGTCGAG
TTTTTGCAGTTTTCAATgggatattttgattttgaagcgCATTTTGCATT
TTCAATGATATCAGGGCTGATCAGGGAataattttgatgttatgtttTGA
TGTCGATTTCCTATAAATCAAATGTGTTTTTTAGGGAGCATTAGCAATGT
CTTTCAGTATCTTTGGAACATCTTTGTGCTTTATCACATCTCATTTCACG
TGT Coding sequence (CDS) from alignment at sc0000016_pilon:2318666..2321518+ >XLOC_040979 ID=XLOC_040979|Name=XLOC_040979|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3280bp|location=Sequence derived from alignment at sc0000016_pilon:2318666..2321518+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTAATGTAGATAATGATCATTCTGGAAGCAATTACACTTACtacaa
tcaaaacattgaattacCACGCGTAAGTAGTATTCCTTCATCACCTCGGG
AAGAAAATCATCGTACAGAATTAGTCAAgaataatacattttttacCCAA
GAAGATGGAGCTATTCAACAAAATGATTCCTTTTCTGGAGTCTCAAATGT
TATCGAATCTCTTAATAATTATGTTAGACCCataaatgatgataaaaacg
atgaggatgatgataaaacagttgatgatacagatgaCAAACCATTATTT
GTTCCATGCCCTCCATCAAAGCCAAAACCAAGTGGACGAATAGTTAGGGC
ACAAGTTCATCCAAAGCCTAGACATCAGCCAAGAGAAGACCAATCTTTTG
CCATTAAGGAAGAAGATTTATCTTTTAACAATCGTTTACCAACTCTTTca
aatgatgattttgatttaaaCAAGCCATCTTCAAAAAACTtgcaagaaaa
aaatcaaagtagCACACCACGTATCAAGTCCGACAGTTCAATAAACAAAT
CACATGACAAGAAGAACAATATATCAAGAGATCAGAGGCTCATTAATCAG
TATACAGAATTACTAAATGAAAGGTTCAGAGATTTTTCTTCGGAATCTGA
GACCGAAGGAAAAGATTTTACAGTATCAGTAAGCAGTCTTAGCAGTGATG
AAGATACTTATGATAATactgatgatgaagatgaaaatcagCTTGAAGGG
CAAACACTTACGCaagaaaaatttgagccattATACAGTTTAcccattaa
aaaatcaaaaaaattgacaagaaCAGCTTTAACAGTATACTTATTTCTAA
TTCAAATATGGGTGGAAGTCTACACCGGACAGGATCTTTGCCAGATCTAA
GGTCAATTGCTGATATGAGCTTGAAAAAAGTAAGTCATGTAAGCAAAAAT
GAGTCCGAAGCTGAGAGTGAACCAGGAGCAAAAATAGGATATAAGTTCAA
ACCACTACCACCAATTCCTGGAACATCGTCAAATATAAACAATACTGGGT
TGTATGAAACAATTGATGGgttatcaaaactttcaaaaaatgcagttacC
AAAACTGAGAGTATTGAGTCAAATAAACGGAAAACATTTAAAGAGATTGC
CACGATATTAACTTTAGTGCCAAGGTTGACAACAAATTCTGTTAGAAGCC
GAAAGAATGATCATAGACTAGCTGAAATTAGCAATTATCTTCCCGATAAA
AAGTTGAAGATATTTGTTGGTACCTGGAATATGAAAGGGACTAAGATGAG
TAATGTAGATAATGATCATTCTGGAAGCAATTACACTTACtacaatcaaa
acattgaattacCACGCGTAAGTAGTATTCCTTCATCACCTCGGGAAGAA
AATCATCGTACAGAATTAGTCAAgaataatacattttttacCCAAGAAGA
TGGAGCTATTCAACAAAATGATTCCTTTTCTGGAGTCTCAAATGTTATCG
AATCTCTTAATAATTATGTTAGACCCataaatgatgataaaaacgatgag
gatgatgataaaacagttgatgatacagatgaCAAACCATTATTTGTTCC
ATGCCCTCCATCAAAGCCAAAACCAAGTGGACGAATAGTTAGGGCACAAG
TTCATCCAAAGCCTAGACATCAGCCAAGAGAAGACCAATCTTTTGCCATT
AAGGAAGAAGATTTATCTTTTAACAATCGTTTACCAACTCTTTcaaatga
tgattttgatttaaaCAAGCCATCTTCAAAAAACTtgcaagaaaaaaatc
aaagtagCACACCACGTATCAAGTCCGACAGTTCAATAAACAAATCACAT
GACAAGAAGAACAATATATCAAGAGATCAGAGGCTCATTAATCAGTATAC
AGAATTACTAAATGAAAGGTTCAGAGATTTTTCTTCGGAATCTGAGACCG
AAGGAAAAGATTTTACAGTATCAGTAAGCAGTCTTAGCAGTGATGAAGAT
ACTTATGATAATactgatgatgaagatgaaaatcagCTTGAAGGGCAAAC
ACTTACGCaagaaaaatttgagccattATACAGTTTAcccattaaaaaat
caaaaaaattgacaagaaCAGCTTTAACAGTATACTTATTTCTAATTCAA
ATATGGGTGGAAGTCTACACCGGACAGGATCTTTGCCAGATCTAAGGTCA
ATTGCTGATATGAGCTTGAAAAAAGTAAGTCATGTAAGCAAAAATGAGTC
CGAAGCTGAGAGTGAACCAGGAGCAAAAATAGGATATAAGTTCAAACCAC
TACCACCAATTCCTGGAACATCGTCAAATATAAACAATACTGGGTTGTAT
GAAACAATTGATGGgttatcaaaactttcaaaaaatgcagttacCAAAAC
TGAGAGTATTGAGTCAAATAAACGGAAAACATTTAAAGAGATTGCCACGA
TATTAACTTTAGTGCCAAGGTTGACAACAAATTCTGTTAGAAGCCGAAAG
AATGATCATAGACTAGCTGAAATTAGCAATTATCTTCCCGATAAAAAGTT
GAAGATATTTGTTGGTACCTGGAATATGAAAGGGACTAAGtttttaccTT
CATCACTGGACGATTTTTTGCTACCACCTGAAAGTATTTATTTACAAGAT
GTCTATGTCATTGGAACTCAAGAAGGAACACCATTCAGtttttaccTTCA
TCACTGGACGATTTTTTGCTACCACCTGAAAGTATTTATTTACAAGATGT
CTATGTCATTGGAACTCAAGAAGGAACACCATTCAGgagaGAGTGGCAAG
TTAGGTTGCAAGAAACCTTTGGACCTTCGCATGTTTTGATGCAATCAagt
aattttggtgttttgcaGCTATCCATTTTCGTAAGAAGGGAGTTGGTTTG
GTTTTGCTCTAgagaGAGTGGCAAGTTAGGTTGCAAGAAACCTTTGGACC
TTCGCATGTTTTGATGCAATCAagtaattttggtgttttgcaGCTATCCA
TTTTCGTAAGAAGGGAGTTGGTTTGGTTTTGCTCTAGCGTTGAACAAGAT
ACAATAGCAACGCGTGTTGGacataaaatcaaaactaaGGCGTTGAACAA
GATACAATAGCAACGCGTGTTGGacataaaatcaaaactaaGGGAGCATT
AGCAATGTCTTTCAGTATCTTTGGAACATCTTTGTGCTTTATCACATCTC
ATTTCACGTGTGGAGCATTAGCAATGTCTTTCAGTATCTTTGGAACATCT
TTGTGCTTTATCACATCTCATTTCACGTGT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000016_pilon | genome | sc0000016_pilon:2318666..2321518 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1573-1641:2785 |
| Aaloc | 1522-1572:2560 |
| Aaloc | 1396-1518:2057 |
| Aaloc | 1297-1392:1613 |
| Aaloc | 808-1296:807 |
| Aaloc | 1-804:1 |
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