|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000049_pilon:1700526..1703639- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_017156 ID=XLOC_017156|Name=XLOC_017156|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3114bp|location=Sequence derived from alignment at sc0000049_pilon:1700526..1703639- (Clytia hemisphaerica_ch_hm2_pilon)
TTCAGGGGAGCTGACGTGACCATCCCGAACGGGCAAAAATTGACACCACT
CATCATTGCTGTCAAATGCAACCGTGTGGAAAACATTGCAGTTCTGATGA
GTTGCAAAGTGGCTCAGAATGAAGATAGTGATGATGGTGAGGATGAAGAA
GATGAAACTACTAGTGAAAAAGGTACATACAGACCATGTTCAGACGTTAC
GGTTTCGTATAGCTCCGGTATGATTTTTGTTACGGATCGAGAGTGTTCAT
ACTGATTTTGGAACGTTTCGGAGCAGTTCTGTTCAGATGAAGATAGTGGA
GTGAAACCGATTGGATCTGTTTTGCTTTTGTAACGTCTTCATTTTTTGAC
GATTCAAATTTTCACATTCGCACAGTGTTTGTTCTTAAGAAATAAGTTAC
CTTTGTTTGTTGTAGATAAAACTGACGAAGCAAACACACCAATGAAACCT
AAGATCAACATCAACGCTAAAGACAAGAAAACATTCACTGCTCTTCATCA
TGCAGCTAAACGTGGATTTAACGTATGTAGCAAGTTATTAACAACCTCGT
CCGATGTTTTATTTACTTTGCTTGTTGACACACAGACCTGTAAAACTCGA
ACGGCTAGATGGCGTGCTTTTACTGAAAATTGTGCCGTGGTTCGGTAGGA
AGTTACTACCGAGGTTACGCGATATTACAATAGAATTTCCAATCAGAAGC
TTCGCGGCTTATCAAAAAACAATAGCAACAAAATTTTATTTGCGATATTC
ACTTATTTTTGCTTGGCAAAGCTTGAAGCACTCCTTCTAGCCCTTCGGGC
TTTACAGAAATCTCGGGTTGACTTCGAATTAGACAATTCCAGAGTTGGAA
AGAGTCGATAGAGTCGATTTTTTACTTAGATATACAAATTTCAATTGCTT
TCCCGGGTTCCACGGCCAGGTCGCTCAGCTACTTTAATGGGATAAACTTT
CGCGGGGATTAAATTTCACGGATTTCGCGGAAATGGGTGTCATCCGCGAA
AATCTACGAAATTATATCCCAATGGAAATTTGGAAGGGTATCATCCGCGA
AATATTTCTAAACAAAACTCAAAATAATATCAAATACTTACTTTTTCAAT
GGCTACTTGCATCAAAGAAGCGCAAATAATGCGTATTTCAACAACCAACA
TGCATTATTTGACAGTAAAAGTCACAAAATCGTGAAAATATTGCCACCCA
ATAGTGCCAGCCGCGAAATTAAGTCCCTGCGAAATTTTATCCCGTTAAAG
TATCTTTGAACTGTACGGAACATTCAGTGTCCAATGCAACAATATTATTG
CCAAGATCATAAATTTCCTATCTTTTTTACTTTTTATCTTCTCTCAGGAC
TGCATTAAGGTATTGCTGGAAAATAATGCTAATGTCAATATCAAATCAAG
TGCTGTTCAAGAGAATATGACACCACTTGGTTTGGCTGCAGCAAAAGGAC
ATTACGAAACAGTCAAATTCCTCCATGAAAATGGTGCTAAACCTGACCTG
AAAAGTATATAAATTTTTCTTCCTGAAAATAGAATTTTTGTAAATCCTTT
GATCCTATATGTTCTTTTTAATTTGAAATGCAAGAAGGTTGTGTGGGAAA
CCTTTTTACAATATACTGGTTTACCAAATTTAAAAGAAACTGTGATTTTC
GAAAACCTATAAATGGGCTTTTCCAGAAAAGATTTGAATATGGAAGGGGT
GTTGGATATAACATTTTTTTGGAAATTTACCCCCCCCTGGACATTGTGAC
TGTTGCCCCCCAGACAGCAGGTGTAACCCCCTGAACAAGCATTTGACAAG
TTTACCCCCGGACAAGGCAAATTTTGTAGATTTTCCACTACCCCCCCCCC
TTCCGGACACTATATCCTCCAGCCCCATGTACGGACATTTTCCGGAAGAG
CCCAATATTCTTGTTAACTTTGATTTTTCAAAACTTATAAAATATTATTA
ACTTACTAAATATTAATGTTAGCTAAAATGACTCAGACGATTATTTTTAA
ATATATTCATTGATATTCATGACGTAATGTGTTCTACGGAAATACCCCGG
TTTTAGCCAGTAGTGACAAATTTAAAAAGAAGACAAACGTTGTATAAAAT
TTGCCACTATTGGCAAAAACCGGGGTCTTTCCGTAGAAAACATCACGTCA
TGAATATCATAAATATCCTATTCTCTACTGAAAAACATTTAGCGAACTTT
AATTATTTCCTTATCTCTAAAGTGCGCCGAAATAAGACAGCCCTTATGTA
TGCATGTATGAACGGACACAGTCAAATCGTGGCTTACCTCTTACGCATCG
GCGTTAACCCGGACGCGCGAGATAGCTCTGACAACACGCCGATACATTAT
GCGGCCGCTTACGGATGGTATCATTGTGTCAAGTTATTGTTAGAGGGTGG
TGCCGATGCAAACATACCAAATAATTGGAAGGTAATGCATAACTTTTAAT
TTAATCGGAATTGAATAATAGACTCCGCTCAAAATCTTGAGTTGTTTATA
GTATAGTAAGCAGATATTGAATAGGTAAAAGTTGGTTATTGAGATTTATT
AACCCGAGTATTTGATGTAATATTCATCAAGATACATGATGAATTTTATG
AAAATGTCTATATTATTCTTTCCAAAAACGAAACCTGTTTTTTAATACAG
TTGACGCTCTCTAATTCGACGTCTACTATTCGATAGGCTCCTTTATTCGA
TGAAATTTAAAGTCCCCGTCAGCAAGAAACTCTCATAAACGACGCTCCCT
TATTATATAAACTCCCTTATTCGATCGAAACCAAATTTCCCTCGAAAATC
GAATTAGAGATGGGCAACTGTATCTCAAAAACAATAATATATTATTTTTT
ACTCCTTTTATATTTTCATTCTAGACAACACCTTTAGCAGTTGCGTTAAT
GAAACATTACATTGAAATCGGTGATTTATTGTTAGACGCTGGTGTTGATG
TGAATTTTGTTGACGAGAACGGATTGACGATCCTGATGAAACATTTAACT
GGAACGCTGTGTAAAGAACAATACACACTTGTCAAACATCTGCTAGAGAA
ATATCACGCCAATCCTCAATTGACAGATGGCTCAAGTTCTAATCTGGTAA
GTGACGGACCGTAG Coding sequence (CDS) from alignment at sc0000049_pilon:1700526..1703639- >XLOC_017156 ID=XLOC_017156|Name=XLOC_017156|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1770bp|location=Sequence derived from alignment at sc0000049_pilon:1700526..1703639- (Clytia hemisphaerica_ch_hm2_pilon)
TTCAGGGGAGCTGACGTGACCATCCCGAACGGGCAAAAATTGACACCACT
CATCATTGCTGTCAAATGCAACCGTGTGGAAAACATTGCAGTTCTGATGA
GTTGCAAAGTGGCTCAGAATGAAGATAGTGATGATGGTGAGGATGAAGAA
GATGAAACTACTAGTGAAAAAGTTCAGGGGAGCTGACGTGACCATCCCGA
ACGGGCAAAAATTGACACCACTCATCATTGCTGTCAAATGCAACCGTGTG
GAAAACATTGCAGTTCTGATGAGTTGCAAAGTGGCTCAGAATGAAGATAG
TGATGATGGTGAGGATGAAGAAGATGAAACTACTAGTGAAAAAGATAAAA
CTGACGAAGCAAACACACCAATGAAACCTAAGATCAACATCAACGCTAAA
GACAAGAAAACATTCACTGCTCTTCATCATGCAGCTAAACGTGGATTTAA
CATAAAACTGACGAAGCAAACACACCAATGAAACCTAAGATCAACATCAA
CGCTAAAGACAAGAAAACATTCACTGCTCTTCATCATGCAGCTAAACGTG
GATTTAACGACTGCATTAAGGTATTGCTGGAAAATAATGCTAATGTCAAT
ATCAAATCAAGTGCTGTTCAAGAGAATATGACACCACTTGGTTTGGCTGC
AGCAAAAGGACATTACGAAACAGTCAAATTCCTCCATGAAAATGGTGCTA
AACCTGACCTGAAAAGACTGCATTAAGGTATTGCTGGAAAATAATGCTAA
TGTCAATATCAAATCAAGTGCTGTTCAAGAGAATATGACACCACTTGGTT
TGGCTGCAGCAAAAGGACATTACGAAACAGTCAAATTCCTCCATGAAAAT
GGTGCTAAACCTGACCTGAAAATGCGCCGAAATAAGACAGCCCTTATGTA
TGCATGTATGAACGGACACAGTCAAATCGTGGCTTACCTCTTACGCATCG
GCGTTAACCCGGACGCGCGAGATAGCTCTGACAACACGCCGATACATTAT
GCGGCCGCTTACGGATGGTATCATTGTGTCAAGTTATTGTTAGAGGGTGG
TGCCGATGCAAACATACCAAATAATTGGAAGTGCGCCGAAATAAGACAGC
CCTTATGTATGCATGTATGAACGGACACAGTCAAATCGTGGCTTACCTCT
TACGCATCGGCGTTAACCCGGACGCGCGAGATAGCTCTGACAACACGCCG
ATACATTATGCGGCCGCTTACGGATGGTATCATTGTGTCAAGTTATTGTT
AGAGGGTGGTGCCGATGCAAACATACCAAATAATTGGAAGACAACACCTT
TAGCAGTTGCGTTAATGAAACATTACATTGAAATCGGTGATTTATTGTTA
GACGCTGGTGTTGATGTGAATTTTGTTGACGAGAACGGATTGACGATCCT
GATGAAACATTTAACTGGAACGCTGTGTAAAGAACAATACACACTTGTCA
AACATCTGCTAGAGAAATATCACGCCAATCCTCAATTGACAGATGGCTCA
AGTTCTAATCTGGTAAGTGACGGACCGTAGACAACACCTTTAGCAGTTGC
GTTAATGAAACATTACATTGAAATCGGTGATTTATTGTTAGACGCTGGTG
TTGATGTGAATTTTGTTGACGAGAACGGATTGACGATCCTGATGAAACAT
TTAACTGGAACGCTGTGTAAAGAACAATACACACTTGTCAAACATCTGCT
AGAGAAATATCACGCCAATCCTCAATTGACAGATGGCTCAAGTTCTAATC
TGGTAAGTGACGGACCGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000049_pilon | genome | sc0000049_pilon:1700526..1703639 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 646-885:241 |
| Aaloc | 439-645:891 |
| Aaloc | 280-435:1768 |
| Aaloc | 175-279:2698 |
| Aaloc | 1-171:3115 |
|
