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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000049_pilon:443419..446116- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_001071 ID=XLOC_001071|Name=XLOC_001071|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2698bp|location=Sequence derived from alignment at sc0000049_pilon:443419..446116- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGACTAGAGAAACGATTATCAAGTGATCCTGATACACATGGCCGAAA
AGATTATGATGTAGCCATCATAGGTAAGAAGAATTTTAAAGTCTTTAGTT
TATTTAGGGGATATGTTCTTAGGCTAAATGGGAAACCAGCGTTAAGAGTC
AAACTCAAACCCAGTCCCTTTTTAGTTCACTTTTAAATGATATTGATAGC
GCGATAGAAACGATTATCATAATCACGTCTATCAGTAAAGTTAAATAGTG
GTGTAAATTGCCCTGGGTACGAGGTTTGTTAAGAGTACCTTTTTCATCAA
ACCAAAAAATCTCCCTATGGGTAACAAAAAAGCAAAAATCTGACGTTAGT
TGACCTTTTGGTAATCCAAGGGTCTTGGAATATTAATGTCAGGTGAATCC
TTGGGGTAGTAGGCTTGCAAAGTGTTGTCCATCCAAGCCAAAATTCGAAA
AAAATGACCGTAACAAGATATCCTTTCATTCAATCTATTCATTGAAAATT
ATTAAAACTTATTTTTATTAATTTATAGGAAATGGACCGTCCGCAATTAT
CCTATCATACTTTTTGTCCGGTCATTGGCCGTATTATAACGGAAAACCTG
TGGATAACCCGGTGTTGAAAGAACGATTGAAATATGTGTCCATGAGCAAA
TCACTTGTTCTGCAGGTAAATAATTGAAGAAATTATTTTCTAACTATCCC
TTTATTAGTAATCGTTATGGCATGTCCTAAAATTACCATAATTTTTAGAT
CGCATTAGTTGAAAGAAAACAACCGAAAAAATGACTGAGCATGAAGGGTA
CTATGTTTTTGACCTGATGTGTAACCTAATTGTTTTTTTTTTCGCAGATT
TTCGCGATAAAAATTATGGTAATTTTCAGTTTTTGAGACATGCCATAACT
TACCCGAGTAGGTTTTTATAGGTGGAAAATGATTCCCTTTAATGTGTCCA
CTCGCTCCAAGTGAGCAGTATTTTATGTAGAAACCACTCTCATGGGATCT
TTCCAAATTATGCTCACATGGTTTCCGTATGAGGGCAAAAAAGAGCACAC
ACATTTAGGGTAGTGGACTTTAGACCGTTCTGCATCTGCATCCTCTATCC
TATTTGAGTTTGTATCATTATTTGCTTGACAGCTGATAATTAAATTAACT
TAATTCAGTTGAAATTGTTTGTGGTAATTTTGGTATTGGGTACATGTTAG
CTGTCACTTACGAGTGTAAAAATACCAGGGCCATAACTTCTTTTTCGTTG
CTTTTCATTTTTGGAATGTATAAGAAATGTTGTGAATAAAAACTAAAGCC
AAAGGAGCCTCTAAAAGTCAAACTTTTGATGAAATTCCAAGAGGTCATAA
TTTCGATTTCTGAAGGGCTCGCCAATGAACTTTTTAAATTCATATTTGAT
TTTTATATCACTTGAAGAATGTTCATCTGTAGTTGTCTTTTTCTATGTAA
TAAAGAATTTGATTCTCTTCATTTCCGCAGGATTTACAATGGCTGAGCGA
AGGTTTGTTCGATTCACGAACCATGAATCCTGTATCAATTCTCTTCGACC
ATTTATACCATCCAAATGCTGATATGTTGACCAAACCCGAATCGGTTATC
GAATGGAAATATTTACCCGAAAATGAAGTCCGACATGTTGTTCTTGGATT
TGGTCCACCGGGTGGTTCATGGCATAATATGATTAACTCACAATTGACTG
TTAGTTTGGCAAACTGGTTGGAATTACCTGGATATACATTCAATGAATGG
TATGAACAGAAACAATTGAGTCTTGGTAATCTACCAAAAGTTCCCAGCGT
CGGTGGTGTACATCCAGAGCGTACAAACCCTTATTATATAGGGCTTTATT
ATTCCGACTATGTCAAATATATGGGCTTATCATCATTTTTCGTTGATAAC
GTTTACGTCAAATCCATCTCACAGAGCTTATCCAACACGTCACAATGGAC
GGTGGAAGGCGTTCAATATACAGACCAACAAACAGGTGAAACGTATACCG
TGAAAGCGGACAACATTGTTATGGCAACCGGAGCTTTCAATAATCCACGC
AAACTCGAGATCCCTGGTGAAGACTTCACCTTCGTACATCACCACTTCCC
AGATTTCGATCGACTCCAGACACACAAATGCCCTGTGGTTGTAGTAGGAT
GTGGGCTAGTTGCAGCAGACGCAGTCCTTTACCTCATCTCACGACAGATA
CCAGTCATACACGTGTTCAGACGTTCGCCTAAAGACCCTAATCTCGTTCT
AAACCAATTATCGTCTGCCTACGCAGACTATTTGAAATTAAAATCGCTGA
TACAGCTCAAATCAAAATGTGAATTTTACACGCCACTTCCTCAACACCGA
TTGGCCGAAATCTTACCCAATAAGGAAGTACTTATTGAGCCATGTGGTAA
AAAGGGCGGTGCCTCGTTCAAAGTTCACGTGAGCCGAGTCATCATCCATG
TTGGATCAAAACCGAATCTGGACTTCATCAAAGAGGAGCATTTACTACGC
GAGGATCCAGAGGAAGAATTTAATATAAAAACAAACTGTTTAGACACTGA
CCTTTTGACGTATGAATGCCGCGGCCGGAAGTCGTTATACGCCATGGGTC
CACTAGTGGGAGATAATTTCATCCGATTTGTATCTGGTGGCGCTCTCGGC
ATCACACATGGTTTATTCCGAAACGAAGCTGAAAATGAAGATGTGTGA Coding sequence (CDS) from alignment at sc0000049_pilon:443419..446116- >XLOC_001071 ID=XLOC_001071|Name=XLOC_001071|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2856bp|location=Sequence derived from alignment at sc0000049_pilon:443419..446116- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGACTAGAGAAACGATTATCAAGTGATCCTGATACACATGGCCGAAA
AGATTATGATGTAGCCATCATAGATGAGACTAGAGAAACGATTATCAAGT
GATCCTGATACACATGGCCGAAAAGATTATGATGTAGCCATCATAGGAAA
TGGACCGTCCGCAATTATCCTATCATACTTTTTGTCCGGTCATTGGCCGT
ATTATAACGGAAAACCTGTGGATAACCCGGTGTTGAAAGAACGATTGAAA
TATGTGTCCATGAGCAAATCACTTGTTCTGCAGGAAATGGACCGTCCGCA
ATTATCCTATCATACTTTTTGTCCGGTCATTGGCCGTATTATAACGGAAA
ACCTGTGGATAACCCGGTGTTGAAAGAACGATTGAAATATGTGTCCATGA
GCAAATCACTTGTTCTGCAGGATTTACAATGGCTGAGCGAAGGTTTGTTC
GATTCACGAACCATGAATCCTGTATCAATTCTCTTCGACCATTTATACCA
TCCAAATGCTGATATGTTGACCAAACCCGAATCGGTTATCGAATGGAAAT
ATTTACCCGAAAATGAAGTCCGACATGTTGTTCTTGGATTTGGTCCACCG
GGTGGTTCATGGCATAATATGATTAACTCACAATTGACTGTTAGTTTGGC
AAACTGGTTGGAATTACCTGGATATACATTCAATGAATGGTATGAACAGA
AACAATTGAGTCTTGGTAATCTACCAAAAGTTCCCAGCGTCGGTGGTGTA
CATCCAGAGCGTACAAACCCTTATTATATAGGGCTTTATTATTCCGACTA
TGTCAAATATATGGGCTTATCATCATTTTTCGTTGATAACGTTTACGTCA
AATCCATCTCACAGAGCTTATCCAACACGTCACAATGGACGGTGGAAGGC
GTTCAATATACAGACCAACAAACAGGTGAAACGTATACCGTGAAAGCGGA
CAACATTGTTATGGCAACCGGAGCTTTCAATAATCCACGCAAACTCGAGA
TCCCTGGTGAAGACTTCACCTTCGTACATCACCACTTCCCAGATTTCGAT
CGACTCCAGACACACAAATGCCCTGTGGTTGTAGTAGGATGTGGGCTAGT
TGCAGCAGACGCAGTCCTTTACCTCATCTCACGACAGATACCAGTCATAC
ACGTGTTCAGACGTTCGCCTAAAGACCCTAATCTCGTTCTAAACCAATTA
TCGTCTGCCTACGCAGACTATTTGAAATTAAAATCGCTGATACAGCTCAA
ATCAAAATGTGAATTTTACACGCCACTTCCTCAACACCGATTGGCCGAAA
TCTTACCCAATAAGGAAGTACTTATTGAGCCATGTGGTAAAAAGGGCGGT
GCCTCGTTCAAAGTTCACGTGAGCCGAGTCATCATCCATGTTGGATCAAA
ACCGAATCTGGACTTCATCAAAGAGGAGCATTTACTACGCGAGGATCCAG
AGGAAGAATTTAATATAAAAACAAACTGTTTAGACACTGACCTTTTGACG
TATGAATGCCGCGGCCGGAAGTCGTTATACGCCATGGGTCCACTAGTGGG
AGATAATTTCATCCGATTTGTATCTGGTGGCGCTCTCGGCATCACACATG
GTTTATTCCGAAACGAAGCTGAAAATGAAGATGTGTGAGATTTACAATGG
CTGAGCGAAGGTTTGTTCGATTCACGAACCATGAATCCTGTATCAATTCT
CTTCGACCATTTATACCATCCAAATGCTGATATGTTGACCAAACCCGAAT
CGGTTATCGAATGGAAATATTTACCCGAAAATGAAGTCCGACATGTTGTT
CTTGGATTTGGTCCACCGGGTGGTTCATGGCATAATATGATTAACTCACA
ATTGACTGTTAGTTTGGCAAACTGGTTGGAATTACCTGGATATACATTCA
ATGAATGGTATGAACAGAAACAATTGAGTCTTGGTAATCTACCAAAAGTT
CCCAGCGTCGGTGGTGTACATCCAGAGCGTACAAACCCTTATTATATAGG
GCTTTATTATTCCGACTATGTCAAATATATGGGCTTATCATCATTTTTCG
TTGATAACGTTTACGTCAAATCCATCTCACAGAGCTTATCCAACACGTCA
CAATGGACGGTGGAAGGCGTTCAATATACAGACCAACAAACAGGTGAAAC
GTATACCGTGAAAGCGGACAACATTGTTATGGCAACCGGAGCTTTCAATA
ATCCACGCAAACTCGAGATCCCTGGTGAAGACTTCACCTTCGTACATCAC
CACTTCCCAGATTTCGATCGACTCCAGACACACAAATGCCCTGTGGTTGT
AGTAGGATGTGGGCTAGTTGCAGCAGACGCAGTCCTTTACCTCATCTCAC
GACAGATACCAGTCATACACGTGTTCAGACGTTCGCCTAAAGACCCTAAT
CTCGTTCTAAACCAATTATCGTCTGCCTACGCAGACTATTTGAAATTAAA
ATCGCTGATACAGCTCAAATCAAAATGTGAATTTTACACGCCACTTCCTC
AACACCGATTGGCCGAAATCTTACCCAATAAGGAAGTACTTATTGAGCCA
TGTGGTAAAAAGGGCGGTGCCTCGTTCAAAGTTCACGTGAGCCGAGTCAT
CATCCATGTTGGATCAAAACCGAATCTGGACTTCATCAAAGAGGAGCATT
TACTACGCGAGGATCCAGAGGAAGAATTTAATATAAAAACAAACTGTTTA
GACACTGACCTTTTGACGTATGAATGCCGCGGCCGGAAGTCGTTATACGC
CATGGGTCCACTAGTGGGAGATAATTTCATCCGATTTGTATCTGGTGGCG
CTCTCGGCATCACACATGGTTTATTCCGAAACGAAGCTGAAAATGAAGAT
GTGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000049_pilon | genome | sc0000049_pilon:443419..446116 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 211-1428:1219 |
| Aaloc | 76-210:2169 |
| Aaloc | 1-72:2699 |
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