|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000288_pilon:380295..383661+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042094 ID=XLOC_042094|Name=XLOC_042094|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3367bp|location=Sequence derived from alignment at sc0000288_pilon:380295..383661+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGAATCAATTgtgtttggttttgatttttctgctgGGAGCGTTTCA
TCTTACTGAATGCAATCGACTGATCAGAGGTAAAACAACTTTTTCATATT
CTTTCTGTCGCTTCATATCATCGGTTTCCTAAAAAGGAAatggaattcca
ataaaaaaaaGGCTCGTACAGGCTCCAAGCTCGGGATTGCAggctttgca
ttttttttgactgaaaaatattttgtcatcaGCATCCAAATGGTAAAAGG
TTTTTCAATAAATTCGATCTAAGATACTTTCTATGTCCTGCTGTGATAAT
TACCGGATCtatcgtgatattcatgacgtaatgttttatacggaagcacc
taAAAAACCGGATGTTTGTTACGAATTTCGAATATAAACAAAACCGTACT
TTAACAGTCATAAGAGATACATCAAGAAGTTTTTCTCACATAAAACGTTA
GCTTCTtggttttatcattttttaaagtGGTTGTACCGCAGCactataaa
atttttttgtcaatttgtgCGTTTGATTGTTGTGTGAACTTTTGAATTGT
TAACAGTGAACACAACTATTGGCAAACGTacgaatatcatgaataagtgT
ACTATAGTAGACTCTTCATAGCTCGGACCTTTTTGATTTAAGCTTCTTTA
GTTTGAACAAACTTTCTTGTCCAAACTTCACCCCATACAGCATAAGATGG
AACCTTTTTATTGATGTTTCTGATTCATCACTAGATACTTTGAAATCAGA
AGACGATGAGATCTTAGCCGAATCCTTCCATCAACAAAAAGCACCTTCGA
CCAACAAGAAACGACAATATATTGAACAATCACAACAAAAACCTATCGTG
GAGACAGTCCCTGATTCACCAACACCACGCAACTATAAAGCAGACGCAGA
GAGCATTGTGGGTGACGTGGGCCGCTATGGATTATGGGAATATACGTCCG
ATAATACTGGAATGGGAGACCAGATCAAAGAATTGATGTCCAAAGCAGAC
AAAATCGATGAAACAGGTGGGGCAGCTCATAATTTGGAAAACGAGGCTCA
CAAGATGAACGATGAGATCAATAAATATGCGGAAGCATCTCAATACCCTC
AACAATCCAACATCGACCCCCTGGAACAACCTGCGGAAATGGATCGCGCG
TCACCCGCATCGAGTGCCAAGGAAAGCGAAGGAGGATCAGTGGCAGGTCA
GAATGGACATGAAGATGTGAGCGTTGTGAATATTCCTTCAGCGTTGACCA
TCGAAGATGAGCACGGGCATCATTTAGACACAGTCAACCCTCAGCCAATC
AAAGCAGACGAATCATCCAAACAAACGTTGCCTGGCAACAAAGAGAAGAC
AGTTGAACTGACGATTGAGAAACCATTAGCAACAAACGTGACATCGGGTG
ATAAAAGAGAGCAATCAGCTCCAAATGATGAAAAAGGATCCTTCACTCTT
CGACTGCTGAAAGCGATGGAGAAAAGTACAGATTTTCGTAAGAAAGCAGA
AGCCTTTCTACCCAAACCTTCAGATAACGCTTTGCAATTATACCAAAAAG
ATAAAGAGTTATCCACTCTACTCAAAGAATTCGACAACGCACAAACAAGC
AAAAATATCACTGAAACAACGGCTGAATCCAAACTACATATTCCTCAATA
CAAAAAGTCGGACGGAAAATTGTTGTCCAATATAAAGCTCTTGATACACG
ATGACTATAGCTCTCACCAAGAAGAGCAAGACGTTTTAAAAGATTTACTG
AAAACAATGAACGGTGCTGAGAAAGTCGAAGGAAAGATCGAGCATGATTT
CACTGATGCGAGCGCCGGCGGAGGCGGACAAACGCTCTCGGATGGTTATT
TGAACCATTTTAAAGAGTTTTTGGAGAAGCACAGACAAGAGGGGTTTGAG
CACGAGGATAATCATGCACACCAAGCAGCTGACGTCCCACATGGAGGTAT
GAAATTTGTTCTTTCAATTATCGTTCACAAAGATTCATTGACAAGTTGGT
TTTTCCTAGAGTTCCTAGCTATGAGTCTGGGAGGATAAAAAGGAGGGCTA
ACTCTATgttacttttttgaattttgttgaagATCGCCCTAcagaaattt
catttcaaagtgAGGTAAACGAAAAACAATTTCCCTCTGGAAGCTGTATT
GCCGGTCTCAAAATAACTCATTTGCTTATCTGTCCTTTATAATCCAAAGA
TTTTACCATCAAAGATAAAAATGGTTTAAAgaccttttgaattttttttc
gtttttagaaGACGGACATGCACTTGTGAAATTTCTTGCAAAGGAAGCTT
TATCTTTTAACAAATTCCGTGAATCCAACACCAAAAATCCTAAACAAGAT
CTAGAGCGCTTGGAAGCCATGATCGCCAAACAAGAAAGCGTAGAAGAACC
GCTTGACGCTAAGAATGAGAAGTTATTGCAGGAGCAGTTGAAACAAATCA
ATGAGGATAAAAGCCATAGTGAGAAAGCACTGGCCAACTTAAAGGCGCAT
AACGGGGATAGCAAAATGAAAGTGGCTACCATTGATGACCACCATACAGG
CATAATACCAAAGGCTGAGGTGCAGGTTTTCGATAacagtatattgaaat
atatccaaacatcaaaacattttcaagatttcctCAAAGAAAAAGGCGTG
TTGGCGGGAACACCTACAGCCGCCCAAAAACCTACCGAAGGAAGTACACG
GGAGTTGGATGATCAGTTGTTCGAGCGGCCACTAGCGGAACAATTCGAAG
AAAttgaattacaaaaagaaatcttgaatttgaaagaaCGTCAATTGAGA
AATCGTGATCGGaataaaaccttgaaaaagaaagaGCGTGAATCGGTTGC
AAAAGCCATGGCTCAAGCGAAAGCGAATCACAAACTCTATCTAACAAACC
CTGAACGTGAAAAGATAAGTGACAACAAAGCGGATGAAGAAACcgaaaaa
gactttgaaaaattggaacaTTTCGCAAAACAGTACAAGAAGCTGCAGga
agtaaaagaacgagagaagcaacgagaaaaggaagaagtgaaattgaaag
cgaaaaagGTTGAACAAATAACACCAAATGTAAAAGATGAAGTGTCGAAA
GTCGACGAGGAAACCGCAGGAAGTGGAGAACAGGCTAGTGGGAGTGGCGT
AGAGGAAAATAATGACGTCGTAAGATTAGAAACAGGGGAATCCCCAAGAC
AAGAAGAAGTTGAGTCTCTGGCAACAAACAAAGAAAGGGATTCCCTGGTG
ACATCGAAGAATGAAGAATTTGCTAAATTATCAGGCGATGGAGAGATCAA
ACTGTCCAACACGTCAGCCCCAGTTGAAAAGACTTCAGACGATCACGGAT
TTTCCAAAAGTATAACC Coding sequence (CDS) from alignment at sc0000288_pilon:380295..383661+ >XLOC_042094 ID=XLOC_042094|Name=XLOC_042094|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4800bp|location=Sequence derived from alignment at sc0000288_pilon:380295..383661+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGAATCAATTgtgtttggttttgatttttctgctgGGAGCGTTTCA
TCTTACTGAATGCAATCGACTGATCAGAGATGAAGAATCAATTgtgtttg
gttttgatttttctgctgGGAGCGTTTCATCTTACTGAATGCAATCGACT
GATCAGAGATACTTTGAAATCAGAAGACGATGAGATCTTAGCCGAATCCT
TCCATCAACAAAAAGCACCTTCGACCAACAAGAAACGACAATATATTGAA
CAATCACAACAAAAACCTATCGTGGAGACAGTCCCTGATTCACCAACACC
ACGCAACTATAAAGCAGACGCAGAGAGCATTGTGGGTGACGTGGGCCGCT
ATGGATTATGGGAATATACGTCCGATAATACTGGAATGGGAGACCAGATC
AAAGAATTGATGTCCAAAGCAGACAAAATCGATGAAACAGGTGGGGCAGC
TCATAATTTGGAAAACGAGGCTCACAAGATGAACGATGAGATCAATAAAT
ATGCGGAAGCATCTCAATACCCTCAACAATCCAACATCGACCCCCTGGAA
CAACCTGCGGAAATGGATCGCGCGTCACCCGCATCGAGTGCCAAGGAAAG
CGAAGGAGGATCAGTGGCAGGTCAGAATGGACATGAAGATGTGAGCGTTG
TGAATATTCCTTCAGCGTTGACCATCGAAGATGAGCACGGGCATCATTTA
GACACAGTCAACCCTCAGCCAATCAAAGCAGACGAATCATCCAAACAAAC
GTTGCCTGGCAACAAAGAGAAGACAGTTGAACTGACGATTGAGAAACCAT
TAGCAACAAACGTGACATCGGGTGATAAAAGAGAGCAATCAGCTCCAAAT
GATGAAAAAGGATCCTTCACTCTTCGACTGCTGAAAGCGATGGAGAAAAG
TACAGATTTTCGTAAGAAAGCAGAAGCCTTTCTACCCAAACCTTCAGATA
ACGCTTTGCAATTATACCAAAAAGATAAAGAGTTATCCACTCTACTCAAA
GAATTCGACAACGCACAAACAAGCAAAAATATCACTGAAACAACGGCTGA
ATCCAAACTACATATTCCTCAATACAAAAAGTCGGACGGAAAATTGTTGT
CCAATATAAAGCTCTTGATACACGATGACTATAGCTCTCACCAAGAAGAG
CAAGACGTTTTAAAAGATTTACTGAAAACAATGAACGGTGCTGAGAAAGT
CGAAGGAAAGATCGAGCATGATTTCACTGATGCGAGCGCCGGCGGAGGCG
GACAAACGCTCTCGGATGGTTATTTGAACCATTTTAAAGAGTTTTTGGAG
AAGCACAGACAAGAGGGGTTTGAGCACGAGGATAATCATGCACACCAAGC
AGCTGACGTCCCACATGGAGATACTTTGAAATCAGAAGACGATGAGATCT
TAGCCGAATCCTTCCATCAACAAAAAGCACCTTCGACCAACAAGAAACGA
CAATATATTGAACAATCACAACAAAAACCTATCGTGGAGACAGTCCCTGA
TTCACCAACACCACGCAACTATAAAGCAGACGCAGAGAGCATTGTGGGTG
ACGTGGGCCGCTATGGATTATGGGAATATACGTCCGATAATACTGGAATG
GGAGACCAGATCAAAGAATTGATGTCCAAAGCAGACAAAATCGATGAAAC
AGGTGGGGCAGCTCATAATTTGGAAAACGAGGCTCACAAGATGAACGATG
AGATCAATAAATATGCGGAAGCATCTCAATACCCTCAACAATCCAACATC
GACCCCCTGGAACAACCTGCGGAAATGGATCGCGCGTCACCCGCATCGAG
TGCCAAGGAAAGCGAAGGAGGATCAGTGGCAGGTCAGAATGGACATGAAG
ATGTGAGCGTTGTGAATATTCCTTCAGCGTTGACCATCGAAGATGAGCAC
GGGCATCATTTAGACACAGTCAACCCTCAGCCAATCAAAGCAGACGAATC
ATCCAAACAAACGTTGCCTGGCAACAAAGAGAAGACAGTTGAACTGACGA
TTGAGAAACCATTAGCAACAAACGTGACATCGGGTGATAAAAGAGAGCAA
TCAGCTCCAAATGATGAAAAAGGATCCTTCACTCTTCGACTGCTGAAAGC
GATGGAGAAAAGTACAGATTTTCGTAAGAAAGCAGAAGCCTTTCTACCCA
AACCTTCAGATAACGCTTTGCAATTATACCAAAAAGATAAAGAGTTATCC
ACTCTACTCAAAGAATTCGACAACGCACAAACAAGCAAAAATATCACTGA
AACAACGGCTGAATCCAAACTACATATTCCTCAATACAAAAAGTCGGACG
GAAAATTGTTGTCCAATATAAAGCTCTTGATACACGATGACTATAGCTCT
CACCAAGAAGAGCAAGACGTTTTAAAAGATTTACTGAAAACAATGAACGG
TGCTGAGAAAGTCGAAGGAAAGATCGAGCATGATTTCACTGATGCGAGCG
CCGGCGGAGGCGGACAAACGCTCTCGGATGGTTATTTGAACCATTTTAAA
GAGTTTTTGGAGAAGCACAGACAAGAGGGGTTTGAGCACGAGGATAATCA
TGCACACCAAGCAGCTGACGTCCCACATGGAGaaGACGGACATGCACTTG
TGAAATTTCTTGCAAAGGAAGCTTTATCTTTTAACAAATTCCGTGAATCC
AACACCAAAAATCCTAAACAAGATCTAGAGCGCTTGGAAGCCATGATCGC
CAAACAAGAAAGCGTAGAAGAACCGCTTGACGCTAAGAATGAGAAGTTAT
TGCAGGAGCAGTTGAAACAAATCAATGAGGATAAAAGCCATAGTGAGAAA
GCACTGGCCAACTTAAAGGCGCATAACGGGGATAGCAAAATGAAAGTGGC
TACCATTGATGACCACCATACAGGCATAATACCAAAGGCTGAGGTGCAGG
TTTTCGATAacagtatattgaaatatatccaaacatcaaaacattttcaa
gatttcctCAAAGAAAAAGGCGTGTTGGCGGGAACACCTACAGCCGCCCA
AAAACCTACCGAAGGAAGTACACGGGAGTTGGATGATCAGTTGTTCGAGC
GGCCACTAGCGGAACAATTCGAAGAAAttgaattacaaaaagaaatcttg
aatttgaaagaaCGTCAATTGAGAAATCGTGATCGGaataaaaccttgaa
aaagaaagaGCGTGAATCGGTTGCAAAAGCCATGGCTCAAGCGAAAGCGA
ATCACAAACTCTATCTAACAAACCCTGAACGTGAAAAGATAAGTGACAAC
AAAGCGGATGAAGAAACcgaaaaagactttgaaaaattggaacaTTTCGC
AAAACAGTACAAGAAGCTGCAGgaagtaaaagaacgagagaagcaacgag
aaaaggaagaagtgaaattgaaagcgaaaaagGTTGAACAAATAACACCA
AATGTAAAAGATGAAGTGTCGAAAGTCGACGAGGAAACCGCAGGAAGTGG
AGAACAGGCTAGTGGGAGTGGCGTAGAGGAAAATAATGACGTCGTAAGAT
TAGAAACAGGGGAATCCCCAAGACAAGAAGAAGTTGAGTCTCTGGCAACA
AACAAAGAAAGGGATTCCCTGGTGACATCGAAGAATGAAGAATTTGCTAA
ATTATCAGGCGATGGAGAGATCAAACTGTCCAACACGTCAGCCCCAGTTG
AAAAGACTTCAGACGATCACGGATTTTCCAAAAGTATAACCaaGACGGAC
ATGCACTTGTGAAATTTCTTGCAAAGGAAGCTTTATCTTTTAACAAATTC
CGTGAATCCAACACCAAAAATCCTAAACAAGATCTAGAGCGCTTGGAAGC
CATGATCGCCAAACAAGAAAGCGTAGAAGAACCGCTTGACGCTAAGAATG
AGAAGTTATTGCAGGAGCAGTTGAAACAAATCAATGAGGATAAAAGCCAT
AGTGAGAAAGCACTGGCCAACTTAAAGGCGCATAACGGGGATAGCAAAAT
GAAAGTGGCTACCATTGATGACCACCATACAGGCATAATACCAAAGGCTG
AGGTGCAGGTTTTCGATAacagtatattgaaatatatccaaacatcaaaa
cattttcaagatttcctCAAAGAAAAAGGCGTGTTGGCGGGAACACCTAC
AGCCGCCCAAAAACCTACCGAAGGAAGTACACGGGAGTTGGATGATCAGT
TGTTCGAGCGGCCACTAGCGGAACAATTCGAAGAAAttgaattacaaaaa
gaaatcttgaatttgaaagaaCGTCAATTGAGAAATCGTGATCGGaataa
aaccttgaaaaagaaagaGCGTGAATCGGTTGCAAAAGCCATGGCTCAAG
CGAAAGCGAATCACAAACTCTATCTAACAAACCCTGAACGTGAAAAGATA
AGTGACAACAAAGCGGATGAAGAAACcgaaaaagactttgaaaaattgga
acaTTTCGCAAAACAGTACAAGAAGCTGCAGgaagtaaaagaacgagaga
agcaacgagaaaaggaagaagtgaaattgaaagcgaaaaagGTTGAACAA
ATAACACCAAATGTAAAAGATGAAGTGTCGAAAGTCGACGAGGAAACCGC
AGGAAGTGGAGAACAGGCTAGTGGGAGTGGCGTAGAGGAAAATAATGACG
TCGTAAGATTAGAAACAGGGGAATCCCCAAGACAAGAAGAAGTTGAGTCT
CTGGCAACAAACAAAGAAAGGGATTCCCTGGTGACATCGAAGAATGAAGA
ATTTGCTAAATTATCAGGCGATGGAGAGATCAAACTGTCCAACACGTCAG
CCCCAGTTGAAAAGACTTCAGACGATCACGGATTTTCCAAAAGTATAACC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000288_pilon | genome | sc0000288_pilon:380295..383661 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1294-2400:2261 |
| Aaloc | 82-1290:737 |
| Aaloc | 1-78:1 |
|
