XLOC_037533 (mRNA) -

Overview
NameXLOC_037533
Unique NameXLOC_037533
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000080_pilon:980338..981224+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037533 ID=XLOC_037533|Name=XLOC_037533|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=887bp|location=Sequence derived from alignment at sc0000080_pilon:980338..981224+ (Clytia hemisphaerica_ch_hm2_pilon)
GACGATATTTGTGAAATTGCAAAACCACCAATTGTTCTGCACACAAATGC CCTTAATATGAAATACAGAGACgactttgatttgtttttgaacGAAATTC TCGGTGGTGCTTGTTCGATACGAAAGTTGATAATCAATCACAAGTTTAGT AGCGATGAAAGAAGAAACTGTGCTTGGTCACCTAAACAACTTGAAATGGT CagtgaaaaagttttcattgaGGAAATTTTGTTGAGTTGTTTATCGATCA CCGATTTTGATGAGcttgttaaaattttgtgtAAACTTAAAGGAACACGT GTCAATATTTTGAAACGTTCAATAACCAATATCTTTTAAATGTTGAAGAT TTGGATAAACTTGCATCGAATAACATAAAAGTTTTCAAGATTGATTGTGA CGCTCTTGAATATGGTTTGTCGAGTGATGGCCTTACAAAGTTTGTTCCCG TACTTTCAAAATTTCAATATTTGGAAGATTTTAACATTCATCATGCTAAG TGCAAAGATCCGATTCCTCTTCAGTTATTTAGTGATTTACCGATAATTAC GCTTTCTACAGCACAGATTCGTTGGGAAGCTGGTAAGATTGCTGAGATTG TTAAATTATTATCTGGAATCAAAACCCTGACTGATTTAGACTTGGTGGAA AATAATCATTCAGATTATAAACTTTCCCTTgcggattttgaatttttcaa aactttaccAGTTGTCATGTTTTTGGACTTGGATGCTTTGGATTTGACAA AGGAAAACGTTCCAGAATTTCGTAAAATCATGCTTGAGATGAAAATTGAA GACATTTTCTGGTGTTCTACGGGTGAATATTcgaattttgatatttctct AAAATCACATGGACCAGATGATTACAAAACCATTTAA

Coding sequence (CDS) from alignment at sc0000080_pilon:980338..981224+

>XLOC_037533 ID=XLOC_037533|Name=XLOC_037533|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1774bp|location=Sequence derived from alignment at sc0000080_pilon:980338..981224+ (Clytia hemisphaerica_ch_hm2_pilon)
GACGATATTTGTGAAATTGCAAAACCACCAATTGTTCTGCACACAAATGC
CCTTAATATGAAATACAGAGACgactttgatttgtttttgaacGAAATTC
TCGGTGGTGCTTGTTCGATACGAAAGTTGATAATCAATCACAAGTTTAGT
AGCGATGAAAGAAGAAACTGTGCTTGGTCACCTAAACAACTTGAAATGGT
CagtgaaaaagttttcattgaGGAAATTTTGTTGAGTTGTTTATCGATCA
CCGATTTTGATGAGcttgttaaaattttgtgtAAACTTAAAGGAACACGT
GTCAATATTTTGAAACGTTCAATAACCAATATCTTTTAAATGTTGAAGAT
TTGGATAAACTTGCATCGAATAACATAAAAGTTTTCAAGATTGATTGTGA
CGCTCTTGAATATGGTTTGTCGAGTGATGGCCTTACAAAGTTTGTTCCCG
TACTTTCAAAATTTCAATATTTGGAAGATTTTAACATTCATCATGCTAAG
TGCAAAGATCCGATTCCTCTTCAGTTATTTAGTGATTTACCGATAATTAC
GCTTTCTACAGCACAGATTCGTTGGGAAGCTGGTAAGATTGCTGAGATTG
TTAAATTATTATCTGGAATCAAAACCCTGACTGATTTAGACTTGGTGGAA
AATAATCATTCAGATTATAAACTTTCCCTTgcggattttgaatttttcaa
aactttaccAGTTGTCATGTTTTTGGACTTGGATGCTTTGGATTTGACAA
AGGAAAACGTTCCAGAATTTCGTAAAATCATGCTTGAGATGAAAATTGAA
GACATTTTCTGGTGTTCTACGGGTGAATATTcgaattttgatatttctct
AAAATCACATGGACCAGATGATTACAAAACCATTTAAGACGATATTTGTG
AAATTGCAAAACCACCAATTGTTCTGCACACAAATGCCCTTAATATGAAA
TACAGAGACgactttgatttgtttttgaacGAAATTCTCGGTGGTGCTTG
TTCGATACGAAAGTTGATAATCAATCACAAGTTTAGTAGCGATGAAAGAA
GAAACTGTGCTTGGTCACCTAAACAACTTGAAATGGTCagtgaaaaagtt
ttcattgaGGAAATTTTGTTGAGTTGTTTATCGATCACCGATTTTGATGA
GcttgttaaaattttgtgtAAACTTAAAGGAACACGTGTCAATATTTTGA
AACGTTCAATAACCAATATCTTTTAAATGTTGAAGATTTGGATAAACTTG
CATCGAATAACATAAAAGTTTTCAAGATTGATTGTGACGCTCTTGAATAT
GGTTTGTCGAGTGATGGCCTTACAAAGTTTGTTCCCGTACTTTCAAAATT
TCAATATTTGGAAGATTTTAACATTCATCATGCTAAGTGCAAAGATCCGA
TTCCTCTTCAGTTATTTAGTGATTTACCGATAATTACGCTTTCTACAGCA
CAGATTCGTTGGGAAGCTGGTAAGATTGCTGAGATTGTTAAATTATTATC
TGGAATCAAAACCCTGACTGATTTAGACTTGGTGGAAAATAATCATTCAG
ATTATAAACTTTCCCTTgcggattttgaatttttcaaaactttaccAGTT
GTCATGTTTTTGGACTTGGATGCTTTGGATTTGACAAAGGAAAACGTTCC
AGAATTTCGTAAAATCATGCTTGAGATGAAAATTGAAGACATTTTCTGGT
GTTCTACGGGTGAATATTcgaattttgatatttctctAAAATCACATGGA
CCAGATGATTACAAAACCATTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_037533XLOC_037533-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000080_pilongenomesc0000080_pilon:980338..981224 +
Properties
Property NameValue
Aaloc313-888:312
Aaloc1-309:1