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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000019_pilon:790459..795079+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038974 ID=XLOC_038974|Name=XLOC_038974|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4621bp|location=Sequence derived from alignment at sc0000019_pilon:790459..795079+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaagttACTTCAAAATTCAACATTTGAATCACTGAGTTCAGCTCTCTC
AGTTCAAGgagataatattaatatttctggcaggtaaatattttttgata
tataTTTCAGTATAAGGTGTCCCAGCACCCATTATATTAGCGCtaactac
cgtgagattgggtaacttgcatcagttcagtggaggctaatgcatgtaca
tgcatagccctcaaatgaaagacctggctggtcattaaaatacaaagtta
aatcaaaacaaaaatggtagagtagaactGCAAGCGGacctgcgtagttg
tattttaatgaccagccaggtcattcattcacttgagggctatgcatgtt
tgcctccactgatgcaagttacccaaaacagagtcgtctaagaaaacagc
tattacgccaactaatagaccttttttcaaagaggacgtcctgttgaata
attaccgtaagttggtctaatgtcgacattcgtcttctaatttcgacacc
ctttgttagagataggaacaatagaaacttgggaaggtcggaatcgctga
ttgactttgattagcgcgattagaggaaaaatctttagtttatcagtgat
ttcgaccttcttaatattcctatctataaagaaggatgtcgaaattagaa
gacggatgtcgacattagaccaacttacggtatgtagtccagccataaaa
acaatgatagagccatgcataattactgtatcatgcatattgtaataatt
atgcatggttttatcattgtttttctgctggactacataattattcaaca
ggacgtcctctttgaaaaaaggtctattttatattatatatacgGACGAA
AACGGCAAtcttttcaacgatgaaatgctgaatcagcaaaatgtgttgtc
ctttccagatgatctcaatcgaacggaatcgacgatcaaaccaatcgaac
gcaatcgaccgattgaaattcgattgtcgaacgcaattgaatctcaatcg
aacttTAAAATTctaggtaatattcgattggttcaattgttgttcgactg
gtttgatcgtcgattccgtttgattgagattgtcaggctttattcttgca
gcttcccaacatccaagctctcaaacatcacaagctgaATGAAATTACtg
tcgatttcccgtagaaattataatcacaaaatgactaaaatgggtcattt
ataaatattttactGGCCATTTTTTATCCACCTCCTTTACTCGTTTCAAG
GCTTTTTTAACATTGACTATCGTGAGTTTCACAGTGTATATGAATATcac
attttagaaattttcagaaaacagtTATTTTCAGGCGTAATTACTTTTGG
AAATTCTCTTTATCATATCAAAAGACAAAGAGTGTTTCAGAGATGAAAAG
AtataaatttttcaacaaaaagtttataattgTGACACTTCATAACGTTA
AGAGAAGGGATGTGTAGTTGTAATCTGGCTCTCACGCCAACAGTAGAGCA
GAAAAGAGTAAGAGCCAGGATTTTTGGCTAGGGTCAGCAGATGATTGATA
AGATTGattgatatatatttttctagtCGAGTGTTTATAGTCTTTCTGAG
AGAGGTAGTCATGCCTAGATTGGTGATTCGAAAATgacatttgaagtttg
tttaaTAGAtaattggttgaaaatgatttcctactaaaaattttctattt
attttttggacctaccacggtggaggtcctataaattaacctgtgtttgt
tcgtccattcgtttgttcgttcgttcgttcgttcgttcgtctgttaccaa
cttttctcaggattgaatcataggaatcttttgatttttggtacaaaggt
gccaAATGGTAGTGGtcaaaatttgttggctcaataaccgcatgtttatc
tataagaatcactattaataagcatacatcaatgttcttagtcaaattac
actcattttgttttataagcataacgacaacgtttataagcatactaaag
ctcaaatttccagaaaaattaagcatatgctaagcataccttgaggctca
gccaaagaaattttaataTCAAATAGCACCAAGCCAAGAGAGAAAGTGTA
GCAGTCTGTTTTTGAAACATGAATACAACACTATAAAGATTCAAAATCAT
AtggtaaacattcaaaaacaatagaatgtcttcatttctctcaTAATTAA
AGATAGGGGAAAATGTGCGAAAattttcacccccccccccccttcataat
ctttttaccaagcatagggttaagcatagtcgaggctcaaaattgagctt
tacttaagcatagtgagcttcagccgaaatttaccgtatgcttataaaac
aaaatgagtgtactCAATTTATTTATGAGGTAGatgttttttgctcatga
gggcttacttttgaagaatatttgtgtttagtcatgaaattttggttgat
tggcgtgtttttatagaaaaactggccaaattcgatattttttcataagc
acCTTATCAAtcacttaggtattagcttttctcgagattggctctttcat
tctttatgatcttttgcacaaagatgcataactacaaaccctcaaatgtg
acagagcccaattttcgacaaaaaaaattttgggcaaatttgggccaaaa
aaacagctaaaaaacaggttttttggactttgtgaaaaattggattcatt
gtttttatgcatgaaagtaggtaaaagatggctcaagcagatttttgtaa
aaaaagaatttttcagcttaaaaaacgcatctttatctataagaatcagt
aTTAATAAttacatacatcaatgttcttagccaaattactcaattttttg
atgagattgatgttttttttgctcacgaagtcttgaatatgaaagaatat
ttcaagagcatgaaattttggtttctaaacgtttttttaataagaaacaa
acgactaattttaatagatcgtcactatttgttttctgaatgattattta
atggtcacgtcacatagatatcaattataaatgtgttaaatgcataacca
ggtaggtccataaaagtatcacttgtttattttAAGTCTGGAGAGTTATT
CTTGCAAAATGACTGGCAACGACAAGAAACTTTACAAAGAGCTGAATATG
TATGGTAAAAGCCCTGCAGACTTACAAGCCTTATCACCATCTGAATCTCA
AATGGAGCAGGTACACGGAATCTCACCGAACTCTCTATACTTACCACCAA
TGCATCGTATACCAAGCACAGATGAAAGTGACATCTCCAATGTATCCGTC
ATGAATCGCAAAATGCTGTTCACTTTAATTTCAACACTTAACGCTTCATT
TCCGGATTACGACTTCAGTTCAGTGAAATCAGAAGCATTCAGTCGAGAAG
GAGATTTGACTTGGATTGTGAATAACATCAACAGTAACCTGTCAACCTCA
ATGGGCGAAGATTTTGTCAAATTAAGTCCAAATTTATGGAAAGCCATTGA
TGATGAGATCTGTCTCTCAGATTGTGAAATATTTAGGTATAATGTTATGC
TGTCCTGttttaattttccccttttttttaaggtttttatccattttAAT
CCAACAAGACATTTAGATAGATTAGATTAAATTTACCATAATTTGGTTTG
TTAACAGTATCATTGCTATGGCTAAGTTTTGTGGTTGTATATCATGTAAT
TTTTATCCATCCTCAAATTCTTTAGTTACAACCCAGACATGGAGTCAGAT
CCATTTGGAGAAGCTGGATGTCTGTGGTCATTCAATTACTTCTTCTTCAA
CAAAGAACTGAAAAGGATTCTATTCTTCAAATGCAACGGCTCAAGGTGAG
AAATATAATCTTGTTGtattacatttttctttatgaaaaaaaattgacgt
atGGTTTTACAGGGTATTGCATTTCTTTTTAAAGATTGCACAAGCTAGTT
ACGGCTAGAGAAGTAGACTTTGAACTCAGGTTGTTTTTAAATATGCTTCA
AAGTCATTACATGGTAATTAGACATAATCACCATTTTCCATCAATTGTTT
GGACATTTTATAAGGCTAATGGAATTAACAATGACATGTCAAATCACATT
TTTGATTTGgataatgactttttttttcgaacatTGAAGTAAACAGGATG
TCTCATgacatttcaaagtttttctacATACAAACATCAATGCACTCAAC
CGAAGGGAAGGAATTGTCAGAACGCTCCTTATATAGAACTATCAAACCAA
TAAGATAAACATTAGCCTTTTGACCACAAAACTGCATCATACATTTGTAT
CCACTTAACATCCTACCCTACACACCTCCATTATATTGGTATGTAGAAAG
ATAACACTTGTTAGAGATTATTAGAGAGTGTATTTCCATAACTAATTTAT
TAAATTGATTAAACAGCAAAGTCTCTTACTCAGATTACCCATTCTTTGTA
AAATAGAAGACGTTTCTACCATTCACCAATTCAGTGGTTAGGCTTCCCCC
ACCCTCCATCTTTCTAAGTTTTTAAGCCCTGAACAATTTTCGTTTTAGTC
TGTTAGCGGAGTCATCCTCagaatttgaccaatttgtcATGGATCCTATG
GACTGTGAAATGGTAAACTGA Coding sequence (CDS) from alignment at sc0000019_pilon:790459..795079+ >XLOC_038974 ID=XLOC_038974|Name=XLOC_038974|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1452bp|location=Sequence derived from alignment at sc0000019_pilon:790459..795079+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaagttACTTCAAAATTCAACATTTGAATCACTGAGTTCAGCTCTCTC
AGTTCAAGgagataatattaatatttctggcagatgaagttACTTCAAAA
TTCAACATTTGAATCACTGAGTTCAGCTCTCTCAGTTCAAGgagataata
ttaatatttctggcagTCTGGAGAGTTATTCTTGCAAAATGACTGGCAAC
GACAAGAAACTTTACAAAGAGCTGAATATGTATGGTAAAAGCCCTGCAGA
CTTACAAGCCTTATCACCATCTGAATCTCAAATGGAGCAGGTACACGGAA
TCTCACCGAACTCTCTATACTTACCACCAATGCATCGTATACCAAGCACA
GATGAAAGTGACATCTCCAATGTATCCGTCATGAATCGCAAAATGCTGTT
CACTTTAATTTCAACACTTAACGCTTCATTTCCGGATTACGACTTCAGTT
CAGTGAAATCAGAAGCATTCAGTCGAGAAGGAGATTTGACTTGGATTGTG
AATAACATCAACAGTAACCTGTCAACCTCAATGGGCGAAGATTTTGTCAA
ATTAAGTCCAAATTTATGGAAAGCCATTGATGATGAGATCTGTCTCTCAG
ATTGTGAAATATTTAGTCTGGAGAGTTATTCTTGCAAAATGACTGGCAAC
GACAAGAAACTTTACAAAGAGCTGAATATGTATGGTAAAAGCCCTGCAGA
CTTACAAGCCTTATCACCATCTGAATCTCAAATGGAGCAGGTACACGGAA
TCTCACCGAACTCTCTATACTTACCACCAATGCATCGTATACCAAGCACA
GATGAAAGTGACATCTCCAATGTATCCGTCATGAATCGCAAAATGCTGTT
CACTTTAATTTCAACACTTAACGCTTCATTTCCGGATTACGACTTCAGTT
CAGTGAAATCAGAAGCATTCAGTCGAGAAGGAGATTTGACTTGGATTGTG
AATAACATCAACAGTAACCTGTCAACCTCAATGGGCGAAGATTTTGTCAA
ATTAAGTCCAAATTTATGGAAAGCCATTGATGATGAGATCTGTCTCTCAG
ATTGTGAAATATTTAGTTACAACCCAGACATGGAGTCAGATCCATTTGGA
GAAGCTGGATGTCTGTGGTCATTCAATTACTTCTTCTTCAACAAAGAACT
GAAAAGGATTCTATTCTTCAAATGCAACGGCTCAAGTTACAACCCAGACA
TGGAGTCAGATCCATTTGGAGAAGCTGGATGTCTGTGGTCATTCAATTAC
TTCTTCTTCAACAAAGAACTGAAAAGGATTCTATTCTTCAAATGCAACGG
CTCAAGTCTGTTAGCGGAGTCATCCTCagaatttgaccaatttgtcATGG
ATCCTATGGACTGTGAAATGGTAAACTGATCTGTTAGCGGAGTCATCCTC
agaatttgaccaatttgtcATGGATCCTATGGACTGTGAAATGGTAAACT
GA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000019_pilon | genome | sc0000019_pilon:790459..795079 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 655-726:4550 |
| Aaloc | 535-651:3727 |
| Aaloc | 85-531:3088 |
| Aaloc | 1-81:1 |
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