TCONS_00014640 (transcript) - C. hemisphaerica

Overview
NameTCONS_00014640
Unique NameTCONS_00014640
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4221

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00014640 ID=TCONS_00014640|Name=TCONS_00014640|organism=Clytia hemisphaerica|type=transcript|length=4221bp
GTAGGTAAAACATAATACAATGGATAAATGGAGCTGTCAGAAGCCAACTC
ACCACTTTTAAATGAATACAAATTAGATtatgttaaaaagatattaccAC
AAACCTTTTTGGGCGGTGTTCAACTGTGGTCCTCATTCAGATTACCATGG
TATATTTATGTGCTCCAGTTTTTGTTATGGTTTTGTCCATTCATATTTGG
GATTATATTTACTGTAATATTGGAAAATATTTCAGATCTTGATGTGGAGA
TATATTCCATTATACTTGGtatcataatttttattatcTATCTGGTTTTG
AATTTGATATTGCTGTATACTGAACGAAGCAAGCCGTCCACACAAACAAT
AATAacaaacaacttttttgctgaAGACGATGAGATCATTTTTACGAAAT
GTTTCAGTTTAACAACCTACAAATTcataatttcttcaaaaaaatcattt
atcaATGTTATACTCCATCCTTTAGTGGCTGGAATCACTTCAGGATTaag
cttgttttttctgcttccAAGCAGTTTAAATACAACTTTGAATCATCAGA
CTGGAGCTATTGTCTATTTCATATTTGGTTGGATTGTAACATGCATTGCA
GTATATCCGTTGATTGGTAAACCACCAAAAGAACCAAACAGCTTTCAGTT
GAATGATCTGTTTGAGTTTGGACAATTAACAAGGGGATGCTATGTTGTCA
TATTAATGCTTACAGATTTACTATGGACCAGTTCAACTTTTCGAATCGTG
TCCAAAGTACTGTACTTGACATTTCcaatattttggtcatttgGTTTGCT
ACCCTCCATTGATGTTTTCATAATATGGATTGTTGAAGAAATTTGTACTA
AAGTATTAGGTGGAACATCGATGGCTAATGACATCAGGTTACTTTTGATC
TTCATTCCATCGTGCGTAGCAGTGCTCGTTTGTTATTTTATCACACATCA
AACTATTTCCTTGATTCTTCTGGCAGTATTGGCAATGGCCCTTTCAACAG
ACATTCCTACCATGGTTTTGTCAACACTCAAACGTTTCCGCGTAGGGTCA
ATCAGATTTCAGAATTTGGAATTACGTCCAAGACATTATCCAACAACATG
TGTAGAGATTTCAGCATTGATTCTACATATGGCATTAACAAGTGTAATAG
TTGGGCTGACCACATATTTTCGAAAGGAGATTCATCAAAAAGATGATTTG
GTTACCATTACAGGAACATTGTTAATTGCATTGTTTGTTTTGACTCTGCT
AATTAAGCAGTTCCTTCAACTCATTTGTTTTGGCATTATCAAAAATCCAG
TGTTGAATCTGATAGATCCTCATAGAAACAAACTACATTGGGTATTGTTT
GTTTTGGAGAAATTTGCTTTGCCAATCATTCTTGTGCTTCATACTTCAAT
CTTTGTCACCTCAAAGTCGAAAGAAAGTTTCGACCTTCTCTTTGTCATGT
TTTCATTTCGTGCTTTCAGAACGATATTTCAAGATATACACCAAAGCACT
TTCAACATTGTAGTCTACACTATCATCTATTGGTATCAGATTGAATGGAA
TTTCTGGCAAAATATGGAATTTCCTTCACAGCTATTTATTATCTTCCTAC
TAATTATTTGGACTTGTTCATTTATCAAGAAAATATGGTTTGTCATTTTA
CTCATCATTGCATCAAAGTCTGGCAAATCTGGTAAAGAGaatcaatcaaa
aatcaacaaatccaTACTTGTAACTTTGACATTGTTCCCTGTTCTACTTT
TGGTGATGTTATTATCCACTGTTCTTTCAGCACCAATGCTTCCTTTGTTT
ACATTACCCTTATTTATAATTGGTTTCCCACGACCAAAGAGAATGTGGCC
AAATGCTGATAAAGCTACAAAGTCGACATCTTCAGACTGGACATTTTATG
AACAACTGACACCTGCACTTCAAGAAGCATTAAATGTTGAATTTTACTCT
GGTGTCTTTTCAAATGCTCAAGCTGGAGATTTTTACCTAGCACGATTTCA
AGATCGAATTATATGGATCAGTGTATTAGAGCATGGCTTCATGTATAAAA
ATATTGTTGTTAAAGGACTGGAATTACAGGAGACTTCCTGTCACACTACT
GAAGCTGAAAGTATCGATGAACTATTGgattttgattcttataaaatcat
CAACAAATATTTTGCACATACCTTAACGCTGACCACCAAAATGAATCTGG
ATGCTTATTCAGATGCTAAGAATGTTTTGACAGGGATTATTGATAATCCT
GACTTTCATCAAACCCTATCCAAAACATTTCCTAATGTTTTACTCTTTTT
ATCAATGAAAATGTTCCAAGATAAATGTAAACAGGGAGTAATTGATGACA
CAGTTAATCTTAATAGCCAAGAGAGTAATGACAATATTTtaggtggtata
atatcagatCAACCGTTTTCTTCTTTTGACACTCCAACACCTTACAAGGC
AACATTCGATGAGACCAAATTTACAATACCGCAAAACAACAAAGaccttt
taaaaaagaattctgagaataatgttgaaaataaacatgctgatgtcagc
aaatgTAATACTGAAGATGAATCTGATGAtgaatttggtgattttggATT
TGGTGATTCTGATAAGTCTGAAACAAGCAGTGATGAAAGCTCGCTCCAAG
ATGGTAATATGAATCTTCAAGACCAACATTGGAGATCTTTGGCAAGTAAT
GGAAAACATACTAAATTTATTGATCCACCTGTCAGTTGGTTGTTGTCTGC
ACCTTTTGGAGAATCTGAACTGAGGACTATGAGTGGTGTATTCAACTCTG
AACATTATCAATTCTTTATTGGTTCTCTAACTTTAAAGGATGAGGATTTG
ATTCTGGTTAAGAATGATATAACTTTGATGCAGTCCTATCGACTGTTtct
attgaattgtttttgtttactgGAAAGAGGTGGCTTAGCGAATGATTGGG
GAATTAATGAAGGTGCAAGTCATATTTATAAGATGTTTTGTGGAAAGTTA
CCATGGTCACCGAGAATGAATTGGATCGAAAATAATCAGGAGCTGAAACA
GATGGTTATCCAAGCCTACAGAATTGCGTTCAAGCTGACATATGATGCTT
TTCTAATCGGTGAAAACAGCATTGAAATTGATGAAGAATTTTTAGATTCT
ATCCATGAAATGGAGAAAGAATGGTTTGTTGGACTGGAGGATGAGGTGGA
GTGGTGgaacaatattttgaaacaaTGTCCAAATATTTTGAGCGTTGGTC
GCAATGAGGATGATggTGTATACACAAGTCGTTTACTCACTCAACAAAAC
CTTCAAGTACCGATAGCATCGATCAATTCTGAATGTGTTAACGGTCTGTG
GGCAGCATTGGCATTGGAGCTGTACTATTTCACCAATGATGACGAAGAAA
GATACAGTATACAAGCATTACCTTTACTTCTCCGTAATATAGTCACGCAG
GCTGCTGATCCGCCTCTCGGATATCCAGTCTATTCTTCAGGAATGATCAA
AGTTTGAGATGTGGTTTGTGTATTTTAGGCTGTTACTTCAGAATCCACTC
AGAACATCTTCCCTTGATACTAACCTTGCAAATAGCCTGTACCATCCTTC
tttatactttttggaaaatggaCGTAAACAGTTATACACTCCAACGCAGA
GACATTCTGAGACTTGTGAGATGAGAAAATGTCTCAGACACAAAATGATA
CCTGAAGTACCTCAAATACCTTACGAGTGAAATTTTTTGCCACCCCTAGG
TTGGGTCTGAAACTTTTTGAGCTTCCTCAGGGGGTGTAAACATTTTTCGG
ATATCCTAAGATATTTTGTATTTAATTTTCGGAACCCACATTTCATTAGT
AGAtaatcattgagtttcaagcccgaagggctagaggcgaaactccTGGA
ttggaaatgaaaccacttatttcccatccagaacgcccgcgcataggttt
tacacaaacgccggattgaaactaaaatctatcgctagatttcaaaatat
gtagttctccaaaacaaaggaaccgctagatacaatccgtcgtcatgatt
acggcgcgtcctatgtgcgttttggatgggaaataagtggcttcaatttc
tcttgcctgagaagggttaaagtttcggctctagcccttcgggcttgaaa
acTCAATGTAGATACTTGATGACCTTACGACCTTGCGAGAATTATTATTG
GGATCAGGTGCAGTTAGCGTG
Run BLAST on NCBI

transcript from alignment at sc0000191:428278..434446-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00014640 ID=TCONS_00014640|Name=TCONS_00014640|organism=Clytia hemisphaerica|type=transcript|length=6169bp|location=Sequence derived from alignment at sc0000191:428278..434446- (Clytia hemisphaerica)
GTAGGTAAAACATAATACAATGGATAAATGGAGCTGTCAGAAGCCAACTC
ACCACTTTTAAATGAATACAAATTAGATTATGTTAAAAAGATATTACCAC
AAACCTTTTTGGGCGGTGTTCAACTGTGGTCCTCATTCAGATTACCATGG
TATATTTATGTGCTCCAGTTTTTGTTATGGTTTTGTCCATTCATATTTGG
GATTATATTTACTGTAATATTGGAAAATATTTCAGATCTTGATGTGGAGA
TATATTCCATTATACTTGGTATCATAATTTTTATTATCTATCTGGTTTTG
AATTTGATATTGCTGTATACTGAACGAAGCAAGCCGTCCACACAAACAAT
AATAACAAACAACTTTTTTGCTGAAGACGATGAGATCATTTTTACGAAAT
GTTTCAGTTTAACAACCTACAAATTCATAATTTCTTCAAAAAAATCATTT
ATCAATGTTATACTCCATCCTTTAGTGGCTGGAATCACTTCAGGATTAAG
CTTGTTTTTTCTGCTTCCAAGCAGTTTAAATACAACTTTGAATCATCAGA
CTGGAGCTATTGTCTATTTCATATTTGGTTGGATTGTAACATGCATTGCA
GTATATCCGTTGATTGGTAAACCACCAAAAGAACCAAACAGCTTTCAGTT
GAATGATCTGTTTGAGTTTGGACAATTAACAAGGGGATGCTATGTTGTCA
TATTAATGCTTACAGAGTAGGTTTGGTTTCTAGGAATATAAAAAATTATG
ATTGTTGAATCTGTTCTCGTTCAGACTTTAATAGAAAGTTATGCTCATAT
CTTTACTGGTAATAATCCTTTGATTTTCATATCCAGTAGAACATTCTTAT
TCAAATGATTTTAACTTTACTCCAAAAATTGCTCAAACTTTTTTTCCTGT
TTCAGTTTACTATGGACCAGTTCAACTTTTCGAATCGTGTCCAAAGTACT
GTACTTGACATTTCCAATATTTTGGTCATTTGGTTTGCTACCCTCCATTG
ATGTTTTCATAATATGGATTGTTGAAGAAATTTGTACTAAAGTATTAGGT
GGAACATCGATGGCTAATGACATCAGGTAAATAATCACATTCACATTTTA
AATCTGCAATGCAAATGATTTTTTTTTCATATTTGTATTTTATATTAATC
GTATAAGAATGACCATGAAAATGTATATTGAAAAGTTTGACTACAATAAT
AAAGTATGACTCTTGCGAATCTGGGTATAGCATTCAAAATGTATCATCTC
GAAAATTTTCTATTCTTCTATTCTTTTACAGGTTACTTTTGATCTTCATT
CCATCGTGCGTAGCAGTGCTCGTTTGTTATTTTATCACACATCAAACTAT
TTCCTTGATTCTTCTGGCAGTATTGGCAATGGCCCTTTCAACAGACATTC
CTACCATGGTTTTGTCAACACTCAAACGTTTCCGCGTAGGGTCAATCAGA
TTTCAGAATTTGGAATTACGTCCAAGACATTATCCAACAACATGTGTAGA
GATTTCAGCATTGATTCTACATATGGCATTAACAAGTGTAATAGTTGGGC
TGACCACATATTTTCGAAAGGAGATTCATCAAAAAGATGATTTGGTTACC
ATTACAGGAACATTGTTAATTGCATTGTTTGTTTTGACTCTGCTAATTAA
GCAGTTCCTTCAACTCATTTGTTTTGGCATTATCAAAAATCCAGTGTTGA
ATCTGATAGATCCTCATAGAAACAAACTACATTGGGTATTGTTTGTTTTG
GAGAAATTTGGTAAGTTCTTAATTACATTTTGGTTACCATAGGAACACTA
GATCTGATTTTGACTAATTGCATGATTTTCAGACTCCAATCTGTCTACCA
CTTTGAAAAGGTGCTTATTAGAAAATTCTCATTTTATGACTCTCCTGATT
TCAGCTTTGCCAATCATTCTTGTGCTTCATACTTCAATCTTTGTCACCTC
AAAGTCGAAAGAAAGTTTCGACCTTCTCTTTGTCATGTTTTCATTTCGTG
CTTTCAGAACGGTAAGTAATTTTGTTATCTTTATTTCTCTGTGCTCTCCA
AAAAGATGATAGTATTGATATATAATTAATTTGATGCCACATTTAGCAAT
CAGATTCGATTTTCAATTTTTCACAAATGAAAATGATTTGTCTACATTTG
TTTAATTTTGCATTGGATTTTTTCTTAGATATTTCAAGATATACACCAAA
GCACTTTCAACATTGTAGTCTACACTATCATCTATTGGTATCAGATTGAA
TGGAATTTCTGGCAAAATATGGAATTTCCTTCACAGCTATTTATTATCTT
CCTACTAATTATTTGGACTTGTTCATTTATCAAGAAAATATGGTTTGTCA
TTTTACTCATCATTGCATCAAAGTCTGGCAAATCTGGTAAAGAGAATCAA
TCAAAAATCAACAAATCCATACTTGTAACTTTGACATTGTTCCCTGTTCT
ACTTTTGGTGATGTTATTATCCACTGTTCTTTCAGCACCAATGCTTCCTT
TGTTTACATTACCCTTATTTATAATTGGTTTCCCACGACCAAAGAGAATG
TGGCCAAATGCTGATAAAGCTACAAAGTCGACATCTTCAGACTGGACATT
TTATGAACAACTGACACCTGCACTTCAAGAAGCATTAAATGTTGAATTTT
ACTCTGGTGTCTTTTCAAATGCTCAAGCTGGAGATTTTTACCTAGCACGA
TTTCAAGATCGAATTATATGGATCAGTGTATTAGAGCATGGCTTCATGTA
TAAAAATATTGTTGTTAAAGGACTGGAATTACAGGAGACTTCCTGTCACA
CTACTGAAGCTGAAAGTATCGATGAACTATTGGATTTTGATTCTTATAAA
ATCATCAACAAATATTTTGCACATACCTTAACGCTGACCACCAAAATGAA
TCTGGATGCTTATTCAGATGCTAAGAATGTTTTGACAGGGATTATTGATA
ATCCTGACTTTCATCAAACCCTATCCAAAACATTTCCTAATGTTTTACTC
TTTTTATCAATGAAAATGTTCCAAGATAAATGTAAACAGGGAGTAATTGA
TGACACAGTTAATCTTAATAGCCAAGAGAGTAATGACAATATTTTAGGTG
GTATAATATCAGATCAACCGTTTTCTTCTTTTGACACTCCAACACCTTAC
AAGGCAACATTCGATGAGACCAAATTTACAATACCGCAAAACAACAAAGA
CCTTTTAAAAAAGAATTCTGAGAATAATGTTGAAAATAAACATGCTGATG
TCAGCAAATGTAATACTGAAGATGAATCTGATGATGAATTTGGTGATTTT
GGATTTGGTGATTCTGATAAGTCTGAAACAAGCAGTGATGAAAGCTCGCT
CCAAGATGGTAATATGAATCTTCAAGACCAACATTGGAGATCTTTGGCAA
GTAATGGAAAACATACTAAATTTATTGATCCACCTGTCAGTTGGTTGTTG
TCTGCACCTTTTGGAGAATCTGAACTGAGGACTATGAGTGGTGTATTCAA
CTCTGAACATTATCAATTCTTTATTGGTTCTCTAACTTTAAAGGATGAGG
ATTTGATTCTGGTTAAGAATGATATAACTTTGATGCAGTCCTATCGACTG
TTTCTATTGAATTGTTTTTGTTTACTGGAAAGAGGTGGCTTAGCGAATGA
TTGGGGAATTAATGAAGGTGCAAGTCATATTTATAAGATGTTTTGTGGAA
AGTTACCATGGTCACCGAGAATGAATTGGATCGAAAATAATCAGGAGCTG
AAACAGATGGTTATCCAAGCCTACAGGTATGGAATTACTTTTTTTGTAGA
GAACTTTTCTGTAGGGAACTTTTCATTTTGTTTTGCTTTTGCTTTTTAGT
CTTAGAGATAATCAGATGCCAATATTCAAATGGATACCATGTTGCATAGT
GATGACACTCGAACTACGCGGGAGCTCATCGCTGACGCAGAACGGGATAA
GTGACACCACACACCACAATGTCTGGCATTAGGTGCAGTGGTTATCGTGC
TTGACTCCCGTCTGGGAGGTCTGAGTTCGATTCCCACTACAGTACTAAGG
TTCACTTGGCAAGTGAACACACCTTCGCCCGGGTGGGGGACACACCCATG
TGAGGGGGATTGGGTACTACTACTCTGAAACAAGAGTGCGAGTGATATGC
AAAACAGACGTTACTTGTTTTGTGTTACTTTTCATACACGCGTATCTTTC
ATTATAACCAGTAAATTTTGGCGAAAGTTTGGATCTTCTTACAAGATTTT
TTAATTTTTCTCGTAATAGATTTAATTTGGCATAAAGACTTTAGAATCCG
TATTTTCTTTGTTATTTTAGATCTGATGCTAAATTGGTCTTTTGATTTGT
TCATAGTTAAGGCCTATAGAAGGCCTCTTGTTCTTATAAATAAAAAGTGT
GTATTTTCCCTTCTGTATTTGTAGAATTGCGTTCAAGCTGACATATGATG
CTTTTCTAATCGGTGAAAACAGCATTGAAATTGATGAAGAATTTTTAGAT
TCTATCCATGAAATGGAGAAAGAATGGTTTGTTGGACTGGAGGATGAGGT
GGAGTGGTGGAACAATATTTTGAAACAATGTCCAAATATTTTGAGCGTTG
GTCGCAATGAGGATGATGTAAGAAATTTTCATTTTGACTTTTAGTTTAGA
AAATTGTCTCTCTGAGGGTCACTCTTTCACCGATCTTGTCTCTCTAAGGA
TATCTTTTATCTTTTTGCAAAAATTTAGTCTCTCTAAATAAGAACCGATT
TTCGGAGGTCCAATCCGCACATACTCGACATTTCGAGCCCCAGTATCATC
CCCCGCCCCTTCAATGGCTTGGCTTGCTCGGGATGAAACCTGCTTATGTT
GGCTATCCAACACGACACGCGTAGTTAAATTTCTCTATATTTTCCTTCTA
TTTTTGTTAAGCAGGTTTTATAATAAGATTATTTTGACAAGTTTGCGTGT
TTTGTCCATGTATATAAATGGTCTGAATAACCATTTTCGCCGTTGAATCT
TCTTTCAGTTGACACATCATATTTCAAAGATTTAGGTGTTGTTTCCAACT
GAGCTTTATATAGAACCTGGAGGCACTTTCGCAATCAAAAAAACTCTGAT
CAGAGATGGATATAGTATGGTCCATGGTTTATAAAAGTCAGTGGTTGTCA
CAATATGAAACAGAGCTTTAAAATTCAATGGTTATTTCATATTAGTTTTC
ATTTTCATGTAGGGTGTATACACAAGTCGTTTACTCACTCAACAAAACCT
TCAAGTACCGATAGCATCGATCAATTCTGAATGTGTTAACGGTCTGTGGG
CAGCATTGGCATTGGAGCTGTACTATTTCACCAATGATGACGAAGAAAGA
TACAGTATACAAGCATTACCTTTACTTCTCCGTAATATAGTCACGCAGGC
TGCTGATCCGCCTCTCGGATATCCAGTCTATTCTTCAGGAATGATCAAAG
TTTGAGATGTGGTTTGTGTATTTTAGGCTGTTACTTCAGAATCCACTCAG
AACATCTTCCCTTGATACTAACCTTGCAAATAGCCTGTACCATCCTTCTT
TATACTTTTTGGAAAATGGACGTAAACAGTTATACACTCCAACGCAGAGA
CATTCTGAGACTTGTGAGATGAGAAAATGTCTCAGACACAAAATGATACC
TGAAGTACCTCAAATACCTTACGAGTGAAATTTTTTGCCACCCCTAGGTT
GGGTCTGAAACTTTTTGAGCTTCCTCAGGGGGTGTAAACATTTTTCGGAT
ATCCTAAGATATTTTGTATTTAATTTTCGGAACCCACATTTCATTAGTAG
ATAATCATTGAGTTTCAAGCCCGAAGGGCTAGAGGCGAAACTCCTGGATT
GGAAATGAAACCACTTATTTCCCATCCAGAACGCCCGCGCATAGGTTTTA
CACAAACGCCGGATTGAAACTAAAATCTATCGCTAGATTTCAAAATATGT
AGTTCTCCAAAACAAAGGAACCGCTAGATACAATCCGTCGTCATGATTAC
GGCGCGTCCTATGTGCGTTTTGGATGGGAAATAAGTGGCTTCAATTTCTC
TTGCCTGAGAAGGGTTAAAGTTTCGGCTCTAGCCCTTCGGGCTTGAAAAC
TCAATGTAGATACTTGATGACCTTACGACCTTGCGAGAATTATTATTGGG
ATCAGGTGCAGTTAGCGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008190XLOC_008190Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014640-exon-sc0000191-1575043694:433731..434446TCONS_00014640-exon-sc0000191-1575043694:433731..434446Clytia hemisphaericaexon
TCONS_00014640-exon-sc0000191-1575043694:433371..433541TCONS_00014640-exon-sc0000191-1575043694:433371..433541Clytia hemisphaericaexon
TCONS_00014640-exon-sc0000191-1575043694:432687..433165TCONS_00014640-exon-sc0000191-1575043694:432687..433165Clytia hemisphaericaexon
TCONS_00014640-exon-sc0000191-1575043694:432436..432542TCONS_00014640-exon-sc0000191-1575043694:432436..432542Clytia hemisphaericaexon
TCONS_00014640-exon-sc0000191-1575043694:430671..432268TCONS_00014640-exon-sc0000191-1575043694:430671..432268Clytia hemisphaericaexon
TCONS_00014640-exon-sc0000191-1575043694:429830..430022TCONS_00014640-exon-sc0000191-1575043694:429830..430022Clytia hemisphaericaexon
TCONS_00014640-exon-sc0000191-1575043694:428278..429234TCONS_00014640-exon-sc0000191-1575043694:428278..429234Clytia hemisphaericaexon
TCONS_00014640-exon-sc0000191-1510915933:433731..434446TCONS_00014640-exon-sc0000191-1510915933:433731..434446Clytia hemisphaericaexon
TCONS_00014640-exon-sc0000191-1510915933:433371..433541TCONS_00014640-exon-sc0000191-1510915933:433371..433541Clytia hemisphaericaexon
TCONS_00014640-exon-sc0000191-1510915933:432687..433165TCONS_00014640-exon-sc0000191-1510915933:432687..433165Clytia hemisphaericaexon
TCONS_00014640-exon-sc0000191-1510915933:432436..432542TCONS_00014640-exon-sc0000191-1510915933:432436..432542Clytia hemisphaericaexon
TCONS_00014640-exon-sc0000191-1510915933:430671..432268TCONS_00014640-exon-sc0000191-1510915933:430671..432268Clytia hemisphaericaexon
TCONS_00014640-exon-sc0000191-1510915933:429830..430022TCONS_00014640-exon-sc0000191-1510915933:429830..430022Clytia hemisphaericaexon
TCONS_00014640-exon-sc0000191-1510915933:428278..429234TCONS_00014640-exon-sc0000191-1510915933:428278..429234Clytia hemisphaericaexon
TCONS_00014640-exon-sc0000191-1491911889:433731..434446TCONS_00014640-exon-sc0000191-1491911889:433731..434446Clytia hemisphaericaexon
TCONS_00014640-exon-sc0000191-1491911889:433371..433541TCONS_00014640-exon-sc0000191-1491911889:433371..433541Clytia hemisphaericaexon
TCONS_00014640-exon-sc0000191-1491911889:432687..433165TCONS_00014640-exon-sc0000191-1491911889:432687..433165Clytia hemisphaericaexon
TCONS_00014640-exon-sc0000191-1491911889:432436..432542TCONS_00014640-exon-sc0000191-1491911889:432436..432542Clytia hemisphaericaexon
TCONS_00014640-exon-sc0000191-1491911889:430671..432268TCONS_00014640-exon-sc0000191-1491911889:430671..432268Clytia hemisphaericaexon
TCONS_00014640-exon-sc0000191-1491911889:429830..430022TCONS_00014640-exon-sc0000191-1491911889:429830..430022Clytia hemisphaericaexon
TCONS_00014640-exon-sc0000191-1491911889:428278..429234TCONS_00014640-exon-sc0000191-1491911889:428278..429234Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000191supercontigsc0000191:428278..434446 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.26492	7.71874	3.09761	2.32358	85.331	56.8415	6.93144	8.87693	3.88348	5.25003	1.86831	2.79911	0.577635	0.669915	1.31031	1.58124	2.72167	1.97699	0.661183	0.747155	1.92707	2.08859	8.13595	8.56152	3.02702	3.20525	3.99377	4.58608	6.54239	6.67685
Blast
[Close]
BLAST of TCONS_00014640 vs. Swiss-Prot (Human)
Match: PCX4 (Pecanex-like protein 4 OS=Homo sapiens GN=PCNX4 PE=1 SV=4)

HSP 1 Score: 416.772 bits (1070), Expect = 2.098e-123
Identity = 352/1196 (29.43%), Postives = 586/1196 (49.00%), Query Frame = 1 
Query:   52 PLLNEYKLDYVKKILPQTFLGGVQLWSSFRLPWYIYVLQFLLWFCPFIFGIIFTVILENISDLDVEXXXXXXXXXXXXXXXXXXXXXXXTERSKPSTQTIITNNFFAEDDEIIFTKCFSLTTYKFIISSKKSFINVILHPLVAGITSGXXXXXXXXXXXXXXXXHQTGAIVYFIFGWIVTCIAVYPLIGKPPKEPNSFQLNDLFEFGQLTRGCYVVILMLTDL----LWTSSTFRIVSKVLYLTF---PIFWSFGLLPSIDVFIIWIVEEICTKVLGGTSMANDIRLLLIFIPSCVAVLVCYFITHQTISLILLAVLAMALSTDIPTMVLSTLKRFRVGSIRFQNLELRP-RHYP-TTCV-EISALILHMALTSVIVGLTTYFRKEIHQKDDLVTITGXXXXXXXXXXXXXKQFLQLICFGIIKNP----------VLNLIDPHRNKLHWVLFVLEKFALPIILVLHTSIFVTSKSKESFDLLFVMFSF-RAFRTIFQDIHQSTFNIVVYTIIYWYQIEWNFWQNMEFPSQLFIIFLLIIWT--CSFIKKIWFVILLIIASKSGKSGKENQSKINKSIXXXXXXXXXXXXXXXXXXXXSAPMLPLFTLPLFIIGFPRPKRMWPNADKATKSTSSDWTFYEQLTPALQEALNVEFYSGVFSNAQAGDFYLARFQDRIIWISVLEHGFMYKNIVVKGLELQETSCHTTEAESIDELLDFDSYK-------IINKYFAHTLTLTTKMNLDAYSDAKNVLTGIIDNPDFHQTLSKTFPNVLLFLSMKMFQDKC--KQGVIDDTVNLNSQESNDNILGGIIS-DQPFSSFDTPTPYKATFDETKFTIPQNNKDLLKKNSENNVENKH--ADVSKCNTXXXXXXXXXXXXXXXXXXXXXXXXXXXLQDG-----NMNLQDQHWRSLAS-NGKHTKFIDPPVSWLLSAPFGESELRTMSGVFNSEHYQFFIGSLTLKDED------LILVKNDITLMQSYRLFLLNCFCLLERGGLANDWGINEGA---SHIYKMFCGKLPWSPRMNWIENNQELKQMVIQAYRIAFKLTYDAFLIGENSIEIDEEFLDSIHEMEKEWFVGLEDEVEWWNNILKQCPNILSVGRNEDDGVYTSRLLTQQNLQVPIASINSECVNGLWAALALELYYFTNDDEERYSIQALPLLLRNIVTQAADPPLGYPVYSS 3489
            PLLN+YK D+  K  PQT LGG +    +  P YIYV Q +L+  P+++G + T +L  +  L     + + G ++     V+    LY +    + + I+T +  AE+DE  FT C    T KF+I  KK   N + H ++AG+  GL  ++LLP+ +        G  + F FGW+  CIA Y LI     E  +FQ  D +E   L R  Y+   +  DL    +        ++++L++ F   P  W+ G LP  D  ++W +E++    LGG+SM+  +RLL++FI S    +  YFI      ++ +      LS ++  M        ++G+ + ++L   P +H+    C+  I  L+L +  TS++     + +     K +   I G  L+ L ++  ++++   +   GI +NP          V         K+  V  +L     P  ++   S+     S +    + V   F RAFR ++Q+   +    V+ + ++      + W N    + L ++ + II      FI K+ F + +++ S + K  K+ +       ++ +   P +L++++ ST+LS+P+LPLFTLP+F++GFPRP + WP A   T    +D  +Y Q+ P L   L     +G       G  YL RFQDR++WI +LE G+ Y +I +KGLELQETSCHT EA  +DE+ + D+++        +N++F + LT  T + +  YSDA+NVL+GII   D H+ L K F   L+ + + +    C  + G+ ++  N  ++     +L  + +   P S  D  +    TF++       +++  +KK     +E KH   D+   N       E    G   +     +    ++  G         +D  +  L   +  H+  +  P  W  S     S+++ MS +F  + YQF +  L     +      L  +  D  L   Y   ++ C+  L        +GI+  A    HI +++ G LPWS  ++W+    EL Q+ ++A+R   KL  D   +G   IE   E +  + E E++W++GL  + +W   IL++ P + S+G + + G+YT R+L+ Q L + +  +N E V G WA L+ EL Y TNDDEERYSIQA PLLLRN+  QAA+PPLGYP+YSS
Sbjct:    6 PLLNDYKQDFFLKRFPQTVLGGPRFKLGYCAPPYIYVNQIILFLMPWVWGGVGT-LLYQLGILKDYYTAALSGGLMLFTAFVIQFTSLYAKNKSTTVERILTTDILAEEDEHEFTSCTGAETVKFLIPGKKYVANTVFHSILAGLACGLGTWYLLPNRITLLYGSTGGTALLFFFGWMTLCIAEYSLIVNTATETATFQTQDTYEIIPLMRPLYIFFFVSVDLAHRFVVNMPALEHMNQILHILFVFLPFLWALGTLPPPDALLLWAMEQVLEFGLGGSSMSTHLRLLVMFIMSAGTAIASYFIPSTVGVVLFMTGFGFLLSLNLSDM------GHKIGT-KSKDLPSGPEKHFSWKECLFYIIILVLALLETSLLHHFAGFSQI---SKSNSQAIVGYGLMILLIILWILREIQSVYIIGIFRNPFYPKDVQTVTVFFEKQTRLMKIGIVRRILLTLVSPFAMIAFLSL---DSSLQGLHSVSVCIGFTRAFRMVWQNTENALLETVIVSTVHLIS-STDIWWNRSLDTGLRLLLVGIIRDRLIQFISKLQFAVTVLLTSWTEK--KQRRKTTATLCILNIVFSPFVLVIIVFSTLLSSPLLPLFTLPVFLVGFPRPIQSWPGAAGTTACVCADTVYYYQMVPRLTAVLQTAMAAGSLGLLLPGSHYLGRFQDRLMWIMILECGYTYCSINIKGLELQETSCHTAEARRVDEVFE-DAFEQEYTRVCSLNEHFGNVLTPCTVLPVKLYSDARNVLSGII---DSHENL-KEFKGDLIKVLVWILVQYCSKRPGMKENVHNTENKGKAPLMLPALNTLPPPKSPEDIDSLNSETFNDWSDDNIFDDEPTIKKV----IEEKHQLKDLPGTNLFIPGSVESQRVGDHSTGTVPENDLYKAVLLGYPAVDKGKQEDMPYIPLMEFSCSHSHLVCLPAEWRTSC-MPSSKMKEMSSLFPEDWYQFVLRQLECYHSEEKASNVLEEIAKDKVLKDFYVHTVMTCYFSL--------FGIDNMAPSPGHILRVYGGVLPWSVALDWLTEKPELFQLALKAFRYTLKLMIDKASLG--PIEDFRELIKYLEEYERDWYIGLVSDEKWKEAILQEKPYLFSLGYDSNMGIYTGRVLSLQELLIQVGKLNPEAVRGQWANLSWELLYATNDDEERYSIQAHPLLLRNLTVQAAEPPLGYPIYSS 1164
The following BLAST results are available for this feature:
BLAST of TCONS_00014640 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PCX42.098e-12329.43Pecanex-like protein 4 OS=Homo sapiens GN=PCNX4 PE... [more]
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