XLOC_031590 (mRNA) -

Overview
NameXLOC_031590
Unique NameXLOC_031590
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000112_pilon:1091954..1092986+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031590 ID=XLOC_031590|Name=XLOC_031590|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1033bp|location=Sequence derived from alignment at sc0000112_pilon:1091954..1092986+ (Clytia hemisphaerica_ch_hm2_pilon)
CTCGGATGTCTTTATAGAAGCCCGACAAAAACCGAAACAAACATCTTCGa tgaaaataataagaacatgaaTAAGCTCATAAAAGATCTCTGCCTTAATC CGAAATACACTGATATATGTCTTATAGGTGACTTTAACTATAAGAAAATC GATTGGGTCCATTGGTCCTCACCTTGTGAAGAAGATAGCGACGAGGAGAA ATTCCTTCATGCTTTAAGAGACTGTTTTTTATACCAACATGTCCTTGAAC CGACACGGCAACGAGGCACCGACAAACCATCAATACTCGATCTCATCCTT ACAGgagaagaaaatcaagtttcCGAGATAAAATACCTTGCCCCACTCCA TCTCAGTGATCACAGTGTCCTCTCCTTTAAATTCTATGGCTACTTCACAA TTAAAAATGAGCTTGATAGATATCAATACAGCAAAGCCAACTACCAGTTT ATGAGATCTCATCTAAGCCACATCAATTGGTCTATCGAATTCATCCAAAA GTGGATTGAATTAGATGTGAATGAGAGTTGGGACTTATTCCTAAAACAAA TGATCGAGCTCCGAAACCTCTATGTGCCACTTACCCACAATAAGAACAAC CTGTCAAATCAAAGGAGGAAAGGGAAGCATCCCTTAGAtccaaaaatttg tcagataatTAAAGAGAAACGTAAGGCGCATAGAAAATGGATCATCTCAC TTCAAAACGACGACACTGAAAGACGTAGAAGGGAGTACGTAAGATGGCGC AACGCCGCTAATAGAGCCCTGACTCGCTCCAAGAGAGAGTTCGaaaaaaa GATCAGcgaacaatcaaaaacaaatccaaaaagattctggaaatatGTAC GCAGCAATCTGAAAGCAAGAACGGGAATACATCCTCTCCTCGAAAACCCT AATAATgaaaattcgatcaaatatgATGACAAAAGTAAAGCCAACATACT CCAGAGCCAATTCTGTAGTGTCTTTACACGTGAGCCACTTCAACAACTCC CTGAATTCCATTCCAGGACGGATAAAGAAGTAG

Coding sequence (CDS) from alignment at sc0000112_pilon:1091954..1092986+

>XLOC_031590 ID=XLOC_031590|Name=XLOC_031590|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1476bp|location=Sequence derived from alignment at sc0000112_pilon:1091954..1092986+ (Clytia hemisphaerica_ch_hm2_pilon)
CTCGGATGTCTTTATAGAAGCCCGACAAAAACCGAAACAAACATCTTCGa
tgaaaataataagaacatgaaTAAGCTCATAAAAGATCTCTGCCTTAATC
CGAAATACACTGATATATGTCTTATAGGTGACTTTAACTATAAGAAAATC
GATTGGGTCCATTGGTCCTCACCTTGTGAAGAAGATAGCGACGAGGAGAA
ATTCCTTCATGCTTTAAGAGACTGTTTTTTATACCAACATGTCCTTGAAC
CGACACGGCAACGAGGCACCGACAAACCATCAATACTCGATCTCATCCTT
ACAGgagaagaaaatcaagtttcCGAGATAAAATACCTTGCCCCACTCCA
TCTCAGTGATCACAGTGTCCTCTCCTTTAAATTCTATGGCTACTTCACAA
TTAAAAATGAGCTTGATAGATATCAATACAGCAAAGCCAACTACCAGTTT
ATGAGATCTCATCTAAGCCACATCAATTGGTCTATCGAATTCATCCAAAA
GTGGATTGAATTAGATGTGAATGAGAGTTGGGACTTATTCCTAAAACAAA
TGATCGAGCTCCGAAACCTCTATGTGCCACTTACCCACAATAAGAACAAC
CTGTCAAATCAAAGGAGGAAAGGGAAGCATCCCTTAGAtccaaaaatttg
tcagCTCGGATGTCTTTATAGAAGCCCGACAAAAACCGAAACAAACATCT
TCGatgaaaataataagaacatgaaTAAGCTCATAAAAGATCTCTGCCTT
AATCCGAAATACACTGATATATGTCTTATAGGTGACTTTAACTATAAGAA
AATCGATTGGGTCCATTGGTCCTCACCTTGTGAAGAAGATAGCGACGAGG
AGAAATTCCTTCATGCTTTAAGAGACTGTTTTTTATACCAACATGTCCTT
GAACCGACACGGCAACGAGGCACCGACAAACCATCAATACTCGATCTCAT
CCTTACAGgagaagaaaatcaagtttcCGAGATAAAATACCTTGCCCCAC
TCCATCTCAGTGATCACAGTGTCCTCTCCTTTAAATTCTATGGCTACTTC
ACAATTAAAAATGAGCTTGATAGATATCAATACAGCAAAGCCAACTACCA
GTTTATGAGATCTCATCTAAGCCACATCAATTGGTCTATCGAATTCATCC
AAAAGTGGATTGAATTAGATGTGAATGAGAGTTGGGACTTATTCCTAAAA
CAAATGATCGAGCTCCGAAACCTCTATGTGCCACTTACCCACAATAAGAA
CAACCTGTCAAATCAAAGGAGGAAAGGGAAGCATCCCTTAGAtccaaaaa
tttgtcagTCCAGAGCCAATTCTGTAGTGTCTTTACACGTGAGCCACTTC
AACAACTCCCTGAATTCCATTCCAGGACGGATAAAGAAGTAGTCCAGAGC
CAATTCTGTAGTGTCTTTACACGTGAGCCACTTCAACAACTCCCTGAATT
CCATTCCAGGACGGATAAAGAAGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_031590XLOC_031590-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000112_pilongenomesc0000112_pilon:1091954..1092986 +
Properties
Property NameValue
Aaloc655-738:950
Aaloc1-654:1