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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000256_pilon:414025..420942- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_033648 ID=XLOC_033648|Name=XLOC_033648|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6918bp|location=Sequence derived from alignment at sc0000256_pilon:414025..420942- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGCTTAAACTACCTTGGCTTTTAGTGGTTTGTTTTGGTTGTTTGTC
TGTTTATAATTTCTTGCGTGATTTAGAAGCAGATTCGAGATTCATTAGCC
TGGAAGAAAAATCAGCAGGTAAGACTTTGATAAACTTGTGCCTGAAAATA
GATCCATTGATATAAGGGAGTGGTCATAAAGTATCTACTAGGGGGAATGT
TTTTCCCACCCTTAGCAAGGAGGGGGTCTATATTAGAATAAGGGGTGTCA
AAAATATATCAACTGGTTAGGGAGACTTGAGAAATTTTTTCGAGGATATC
AAGGGGGTGCGAACTTTTTGTGGAATTTTTGAAAATATCCTCTACCTCTC
CACCCTATTTCGGACCACTCCCTAATTTTTTAGCTTGATTTTAGGTCTTA
AAAGACTGTAAGTTAAAGCAGAAGTGTTGGTTGAATATCGGACAAAGATT
GTTTATCACCTTGGAAGATAGCCTTTTGAGACAGCGAAATCTCTGCAGTT
GTCACAAAAAGAGGCAAAAAAAATTTCGGTCTCCTTAATGGTTCAAGAAG
ATATGATGCAAATAATCCAAAGTCTGCAGGAAGCACCCCTCATCACACCG
CGCTAAATGCTTTGCCATCACAGTAAGGAAACGGCCAAAATTTATAGATT
AGCGCCATCACAACAAAATCTTTTTTGGAATCACACCATACAAACAGTCT
TGGACCTCTATTAAGAGCCGTACAACTCAAAAAAAGATTATCGAATTGAA
TGAACCTTGTTGTAATCTCGCAGGGGTACGGGGTCAAAGTGACAGACCCG
CTAGCCGATTATTACAACCCCTTCTCACAGACCCGGTAGTATTTTTTCAG
CCAGTGGGGATAAAAAAAACAGACTGAAACTCAATGGGGATTAATATCCC
CATATTTTTTTATGGCTAGGGATTTCAATTCTTATGTTTTCAAGTCAGAA
AATTCAGCGGGGATGGGAAAAATAATAAAAAATTTGCAGTGAAGATTGAT
TTATTTGATTATTTTCAGTGGAGACAAAAATTGAAGGATAAATTTCGACC
GGGGACGATATTTTGGCCAATTTTTCCAGTGGGAAGGGGTCCCAGTGGGT
CTGTGAGAAGGGTATGTATTATCATAAAAATCTAATCCAACCTAATAAAA
CTAACTAACGTTTACCATAACATATAGACGATGTTATCGTCCGTTACAGT
GATAGTAAAGGCGGGAAAAATGGCGGTATGGCGTTATGGCGGTACACGGA
AAAAAAAATCGGCGGGAGAGTTTCGAAGAAACGGCAACTCTACCGACTGT
AAACTCTTTTCGGTAAAAAAATCCGTTTGCGAATGTTCTTCGGCTTTGGG
CTTTTTTCTTAGATAGTGATTGGTCTTAGACTATAGCATAGTCTACATAA
CATAATGAGCTGAACAATATATAAGGTTATCTTGGACAGCTAGAGAAGTG
ATATGATAGTACGGAACAGAAATAAAAGACACTCTGACTTAGGGAGCGGT
CATAAAGTATCTACTAGAGGGGGGTGGAGGATATTTTGAAAAATCCAAAA
AAAATTTCGCACCCCCCCCCTACTAAGAAAATTTTTACGCGAAAAAGAAT
TCATCCAGATGCGGTACAAAGAGTATTATTTGTTTGTATGACAGTTTTTT
ATGTCAAAATAAGGTAAGGGAGATAGTTTAGCGCTGTTAAGTTAAAGTAT
AACAGGGTTAAGACAAGAATCATCAAGTGGTTTTCTCTGAGCTTCTGTAA
AATTTGGAAAAAAATACGGCTTATTTTCCCCAGTAGCGACCTGGCTTAAT
TCTCTGGGGTTGCAAACTATGAAATTGGCGCCCCTGGTATTTTTTGTCCT
TACTCGCGCCCTCCATTATTAAGTGAAAATATTAAACTGTAAGAGCAGTA
TGGTTGAAAGTAACGCCCGGAATCTTTGAGTCAAGAAACTTGGAATTTGT
TTTTTTTAATTTTAAATGTTAAGGTGTTTTGACATTAGCAGATGCTAAGG
AGGCGCAACCTAGGTTTGCGCCAACAGGTCAAAATTTCAATATTTTCCAC
CACCATTTTAGCTAAAATACACTTTGTTTTGACAAATTTCTTTTAAGAAG
TACTTTTTCAAACCACTCTGATGAGCTGTGAGAGCCACTAATCTACTTCC
CTCACCTAGCTCAATGTTACAAATCAAAAGGGCAAGGCGATGATGCCCAA
ATAATGGCAATATGAAATGTACATATATCGAATAAGATAAATTATGAGTT
GTCGGCCGTAAGGCCGAAAAATTTTTGAAATCTTCAAATGTAAAACTATG
AAATTAGACTTCCTACATTTTCTCTTGAGTTTCCCAAAAAAAATTGGAAC
CCCCCCTAAACCCTCAAAAAAAATTTGTAACCCCCCCCCCCCTAAACCCT
CGAAAAAAATTTCGAACCCCCCCTAGTAGATACTTTATGACCGCTCCCTT
ACTGACAGTTGATTTTAAATTTTGATTTCATAGACCATGGCAGACATCGA
AGAGACACCGGAACAGAAAATTGGCAAAACATCTTAAACCTGGATACATT
AAAGGAATTCGTTCAAAAGCATTCCAACGAAACATTTCAAAGGGAAATTA
CACACGTGTTGGGGCAATTGATGTTAAATTTTCCTGCAGATAAACTGTGC
AAAAATTTCATGATTCGATGTGGGAAAGGTAGCCATTTTTGATATCAGTT
TCTCAAGTAAACATTTTTTCATAAGAACAAACTATATAAGAACATAAGGC
TTCGACTGCTAAATATTAAGACAAAATTAAGAACGTTTTAAGGCTTAGGA
TATTCCAAAAAAATCTCATTTCTCAGGAAAATGGACCAAAATACTCACAA
AATGGCGAAATTATAGTAATGTTTAAAACTCAAAAGTTAAGAACAATCCG
AAGGCTTCAAAACTTTTGGATGTGAAAAGCGTGTAATATAATACTGCGCT
TGAAATGAAAACAACTGTTGTCAAAAAAACACTTCAAAAGCTGTCAAAAG
CTCTATAGATTATTTCTAAGTGACCTCTTTAAGATTGGATTGCTGTATTT
TGTTTCTAATTAAAGTACAGTTGACGCTGTCTAATTCGACGTTCTACTAT
TCGATTGGCTCCTTTATTCGATGAAATTTAAAGCCTTCGTCATGAATACA
CTCTCGTAAACGACGTTCCATTATTCGATAAGTTCCCTTATTCGATGAAA
ATCCAATTCCCCTTGAAGATCGAATTAGAGAGCGTCAACTGTACTTTGAA
GAAGGAGTAATTTTGTCACGTGGAAAAATCTGCACTGTAATATGATTTAG
AAAATTCAAAACAAAAAAAGATTCTCACCAGTGGATATCCAAAAAAACAA
AAAAAACACAACAAATTCCTTCATGAAGCTGAGAGAATTTCAATGATCCC
CAACTTTTGTCCAAAGCCAGTTTTTGAGCAACAATCCCGCTAACCAGTGG
AATTGTTTTTGTAGATAAATGTACAGAGGAAAAGGTTGTGATTGCTGGAG
ATCAAGAAATTGGGAACAAGGGAAAAACAAAATGTATTCGTGGTCCACCT
GTAAGTAAAGTTATCTCATTTTTTTCGGAATTTCTTAAAGGTGCACTCTT
TTCGTTGGATGCTTGAAAACCTTGGTAATCATTTCTAGACGAGATAGTGG
TTAGACATGACGTAATTTATTAAAAGGTCTACTTTGAATTTGAAGAGCTT
TTTCGATGTTTTTATCAAGGATAGAAATCCCAGATGGAATAGAAGACATA
GAAAACGTCAACTGGACAGATTCTCGTCTACAGACAAAAAGTTGCAACAT
TGAAATCATTCATTTCCCATAGGTACAGTTTTGCATGGTCCCTTTTAAAA
ATTTCCAAGCATTATCTATTACCTAAATTTATCTTTATCCAATTACATCA
CTTTCTATTTTAGGGTCCACAAGGTCCACCTGGTCCACGAGGACCTAAAG
GGTCGAAAGGGTTAGGATTAGAACCACCAAAATTGGTTCAAAATTCACTA
GGTGATCGTGTAGTTAATTTGACAGATTCGACAACTTTTGAATGTACATT
TTTTGGCAATCCAATACCAACAATATCATGGAGAAGCGTCGCCAATAATG
GTCGAGTCAGTTCTACTGTTGACAAAGAAAAATCAGAGATCACAACCCAA
TTGACCCTTAAGAATATTTCATGGAATGATCAAGGACCTGTTGAATGTCG
TGCGAAGAGCTTACTTGGAGAAGATTATGGCTCAGGAAATCTTTCTACGT
TGTGTAAGTATACTAACGAACGGTAGTTCCATTTGGATGTTTTTTAACAA
AATTTGAGTATTGGGTAGATATGACATGATGAAGGGTGAGGTCTCTGCTG
CCTTCATTTGTGATACGGTATTTTCCACATGTTACCATGAAACAAGGTGA
CCATATCTGCACAGAATAGTTCGACTTAGTTCATAGAACCGAAGAGCTGT
CTCTATCTGTTTCATCTATCGTATGGTAAGTAGAAACCATAAAAATAGTG
GAGAAAACATCCTCCACATTGCCCGATGATGGCAATGTAAATCTCGTTAT
CCAAGCCACGATAAACTTCCGATATTGATAAGCATAATTCACTTTCTCAT
TTTTTACTCTAATTTCGTCAATAGTGGAACCAGTGATCCACATGACAGAA
ACTTTGGTTTTCGCACCAAACGGAGTTAATTTCCAGCTACCAGAATGCAA
AGTTCGTTCAAATCCAACTGCTACAGTTACATGGAAAAGGATCTTCTGGT
CGATGCCTGTCGGTCGTTTTAATGTTCAAGAAAACAAGTTGATGATCAAT
AATGTGCGCTATTCAGATGAAGGATTTTATGTCTGTGAAGCTGAAAATTA
TCTAGGTATCAATCATTATTTTTAGTACTAATTTATTGTTATGATCCTGA
GGGTCCACATACGATACTGCAAAAAAAATGTATGGGCTGAATATTTAGGT
TGTTGAATATCTTTCCTTTTTTTTCGTTCTGGCATGTTATATCGCGTTGT
CTTCGTTTCCTTTATTGATTTGCATTGAAAAATAACACTTTGTCGGTGAA
TTCAGCAGAAAAGAATTAACTGACCCTGGTTTAATGAATATCTAAACAAG
CAGAAACCTGAAGAATAAAATGTATATAGTATGATAACCTTCTCTAGTTT
TGTTCCAGGCTAACAATCAAATCAAAGGAAAGAATCCGATTCATTTTCCA
TCTCCATATTCCCAGGTAAAGATAAAAAGACAGTACAACTGAAAGTCAAA
GGATTTGAAATGTATCACTCGTCGCCATCTTACATTGCTTCCATGACAAC
TGACACAACAAACGTTACTTGTTCCGCATACGGAAACACCAAAGAAATGA
CCGGTACAATCAGTAAATCTGGACGGAATATACCGGTTGTGATTGAAAAG
CGGGAAGATAACTTGTTTGTGGTAGCAGCAGAAATTACAGAGGATGGGAC
TTATGTTTGTACTATCGAGTATGGTAAAGAAAAAGTTGAGAGCGCTTCAG
TTGTGGAATTCTTTACGCGTAAGTTTTGAATTCTTAATTCTTCTTATAAT
TTAAATTTCAAGTGCCTCGCGTGCACTAAATTTCAATACAAGAAATAATA
TAACTGAGTATTGTCAACGGAAGCTGTTCCAGCAAAGTTTCTGGTAAAAA
ATCGACGGAAGACCTTACGTGAGCATAATATGTAAATATTTCATTTTCAT
CAATTTCAGTCCAATCGAAAATCTTCAACAGCACTCAAATCGAAACCATT
CGAAGTTGGTTAGATGAAGCTGGTAAACTTGGCAAATATGAGCCATGCTT
CACCTTGTCTACACCTTCAACCAACTTCTATCAACCTTCTTACTGCGGAG
ACAAATCAAATACTATTTCATTGATGCAAGTTAAAGACAAGCTCAGATAC
GGACGGGATCGTTACGGCAGATATAGATACGATTGGGGGAGTATTTATGG
CGGATTCACTGACATCCCATGGAATAGTAAGAAAATATACACACCCAGCT
GGCACACAACGTTGTTTCAACGTTCATCTAACGTTAAAATGGACGTTGTG
AACATTAGATAAACGTTAAAACAAAGTTGTTTGCCAACTGGGCAACTTTT
ACAAAATTAAACAATACACAGCTTCATGTAAAAAATTCCTTAGCTATTTT
ACTTGAAAATCTCAGTAATGATCTAAGATTCAACATCGTCTCAAAGAGCT
GGGCATGTTTTATACCAAAATTTCCAAATTTTACGCAGAACATACAATGA
GCCAATTTTGGGTCCAAATGGCTCAAATCACATCGAATCAAAAGTCAAAT
TTCGAAAACTCAGATGTTGACAATCTGAACCATGTTAAAAAAATTCCCTT
TTTAAGCATTTTTTGCTGACGTCAGCCTTTTTTAGATAATTTTGAAAAGA
TTCAGATAAGAACTAATTCGAGGTCATGAAAGCGAGTACTATCACTCATG
TTTCTTCGTCCTTCTGTTGAGATATTGTGAAATAAAAGTGGGTGTTTTTA
TGTTGAGTCAGCATTTTTTACATATTATTCGAAAAAGAGCATAATATTAA
ACGGTCTCCGTCGTCGCAAACGTTGGCTATATAAACTGCTTACGCTTGAA
ATAAATCTCTTAGTCAGAGAAGCATATGGAAGAATTGTATATCGATTTTT
ATATTTAATTTTAGGATATTCATCAAGAGCCAGTAACTCAACATTCATCT
TTGACCTCAATCAAATGGAGAAATATCCTCTCCGCGATACAGCTTATGCA
AGATCAAACGCCGTTTGTTATTACAATGGATATGGGCCTTGTTTTGGTTC
GACGGATCTCTACGTGCGTTCAGGGTCATTGGGAAATAAAGGCAGATGGG
TATTCCAAGACGTCCCAAGTATTCAAACCGGTCGTGAAGTCAGAATGGAG
GTCTTTTACAAAGTTTAA Coding sequence (CDS) from alignment at sc0000256_pilon:414025..420942- >XLOC_033648 ID=XLOC_033648|Name=XLOC_033648|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3588bp|location=Sequence derived from alignment at sc0000256_pilon:414025..420942- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGCTTAAACTACCTTGGCTTTTAGTGGTTTGTTTTGGTTGTTTGTC
TGTTTATAATTTCTTGCGTGATTTAGAAGCAGATTCGAGATTCATTAGCC
TGGAAGAAAAATCAGCAGATGGAGCTTAAACTACCTTGGCTTTTAGTGGT
TTGTTTTGGTTGTTTGTCTGTTTATAATTTCTTGCGTGATTTAGAAGCAG
ATTCGAGATTCATTAGCCTGGAAGAAAAATCAGCAGACCATGGCAGACAT
CGAAGAGACACCGGAACAGAAAATTGGCAAAACATCTTAAACCTGGATAC
ATTAAAGGAATTCGTTCAAAAGCATTCCAACGAAACATTTCAAAGGGAAA
TTACACACGTGTTGGGGCAATTGATGTTAAATTTTCCTGCAGATAAACTG
TGCAAAAATTTCATGATTCGATGTGGGAAAGACCATGGCAGACATCGAAG
AGACACCGGAACAGAAAATTGGCAAAACATCTTAAACCTGGATACATTAA
AGGAATTCGTTCAAAAGCATTCCAACGAAACATTTCAAAGGGAAATTACA
CACGTGTTGGGGCAATTGATGTTAAATTTTCCTGCAGATAAACTGTGCAA
AAATTTCATGATTCGATGTGGGAAAGATAAATGTACAGAGGAAAAGGTTG
TGATTGCTGGAGATCAAGAAATTGGGAACAAGGGAAAAACAAAATGTATT
CGTGGTCCACCTATAAATGTACAGAGGAAAAGGTTGTGATTGCTGGAGAT
CAAGAAATTGGGAACAAGGGAAAAACAAAATGTATTCGTGGTCCACCTGG
TCCACAAGGTCCACCTGGTCCACGAGGACCTAAAGGGTCGAAAGGGTTAG
GATTAGAACCACCAAAATTGGTTCAAAATTCACTAGGTGATCGTGTAGTT
AATTTGACAGATTCGACAACTTTTGAATGTACATTTTTTGGCAATCCAAT
ACCAACAATATCATGGAGAAGCGTCGCCAATAATGGTCGAGTCAGTTCTA
CTGTTGACAAAGAAAAATCAGAGATCACAACCCAATTGACCCTTAAGAAT
ATTTCATGGAATGATCAAGGACCTGTTGAATGTCGTGCGAAGAGCTTACT
TGGAGAAGATTATGGCTCAGGAAATCTTTCTACGTTGTGGTCCACAAGGT
CCACCTGGTCCACGAGGACCTAAAGGGTCGAAAGGGTTAGGATTAGAACC
ACCAAAATTGGTTCAAAATTCACTAGGTGATCGTGTAGTTAATTTGACAG
ATTCGACAACTTTTGAATGTACATTTTTTGGCAATCCAATACCAACAATA
TCATGGAGAAGCGTCGCCAATAATGGTCGAGTCAGTTCTACTGTTGACAA
AGAAAAATCAGAGATCACAACCCAATTGACCCTTAAGAATATTTCATGGA
ATGATCAAGGACCTGTTGAATGTCGTGCGAAGAGCTTACTTGGAGAAGAT
TATGGCTCAGGAAATCTTTCTACGTTGTTGGAACCAGTGATCCACATGAC
AGAAACTTTGGTTTTCGCACCAAACGGAGTTAATTTCCAGCTACCAGAAT
GCAAAGTTCGTTCAAATCCAACTGCTACAGTTACATGGAAAAGGATCTTC
TGGTCGATGCCTGTCGGTCGTTTTAATGTTCAAGAAAACAAGTTGATGAT
CAATAATGTGCGCTATTCAGATGAAGGATTTTATGTCTGTGAAGCTGAAA
ATTATCTAGTGGAACCAGTGATCCACATGACAGAAACTTTGGTTTTCGCA
CCAAACGGAGTTAATTTCCAGCTACCAGAATGCAAAGTTCGTTCAAATCC
AACTGCTACAGTTACATGGAAAAGGATCTTCTGGTCGATGCCTGTCGGTC
GTTTTAATGTTCAAGAAAACAAGTTGATGATCAATAATGTGCGCTATTCA
GATGAAGGATTTTATGTCTGTGAAGCTGAAAATTATCTAGGTAAAGATAA
AAAGACAGTACAACTGAAAGTCAAAGGATTTGAAATGTATCACTCGTCGC
CATCTTACATTGCTTCCATGACAACTGACACAACAAACGTTACTTGTTCC
GCATACGGAAACACCAAAGAAATGACCGGTACAATCAGTAAATCTGGACG
GAATATACCGGTTGTGATTGAAAAGCGGGAAGATAACTTGTTTGTGGTAG
CAGCAGAAATTACAGAGGATGGGACTTATGTTTGTACTATCGAGTATGGT
AAAGAAAAAGTTGAGAGCGCTTCAGTTGTGGAATTCTTTACGCGTAAAGA
TAAAAAGACAGTACAACTGAAAGTCAAAGGATTTGAAATGTATCACTCGT
CGCCATCTTACATTGCTTCCATGACAACTGACACAACAAACGTTACTTGT
TCCGCATACGGAAACACCAAAGAAATGACCGGTACAATCAGTAAATCTGG
ACGGAATATACCGGTTGTGATTGAAAAGCGGGAAGATAACTTGTTTGTGG
TAGCAGCAGAAATTACAGAGGATGGGACTTATGTTTGTACTATCGAGTAT
GGTAAAGAAAAAGTTGAGAGCGCTTCAGTTGTGGAATTCTTTACGCTCCA
ATCGAAAATCTTCAACAGCACTCAAATCGAAACCATTCGAAGTTGGTTAG
ATGAAGCTGGTAAACTTGGCAAATATGAGCCATGCTTCACCTTGTCTACA
CCTTCAACCAACTTCTATCAACCTTCTTACTGCGGAGACAAATCAAATAC
TATTTCATTGATGCAAGTTAAAGACAAGCTCAGATACGGACGGGATCGTT
ACGGCAGATATAGATACGATTGGGGGAGTATTTATGGCGGATTCACTGAC
ATCCCATGGAATATCCAATCGAAAATCTTCAACAGCACTCAAATCGAAAC
CATTCGAAGTTGGTTAGATGAAGCTGGTAAACTTGGCAAATATGAGCCAT
GCTTCACCTTGTCTACACCTTCAACCAACTTCTATCAACCTTCTTACTGC
GGAGACAAATCAAATACTATTTCATTGATGCAAGTTAAAGACAAGCTCAG
ATACGGACGGGATCGTTACGGCAGATATAGATACGATTGGGGGAGTATTT
ATGGCGGATTCACTGACATCCCATGGAATAGATATTCATCAAGAGCCAGT
AACTCAACATTCATCTTTGACCTCAATCAAATGGAGAAATATCCTCTCCG
CGATACAGCTTATGCAAGATCAAACGCCGTTTGTTATTACAATGGATATG
GGCCTTGTTTTGGTTCGACGGATCTCTACGTGCGTTCAGGGTCATTGGGA
AATAAAGGCAGATGGGTATTCCAAGACGTCCCAAGTATTCAAACCGGTCG
TGAAGTCAGAATGGAGGTCTTTTACAAAGTTTAAGATATTCATCAAGAGC
CAGTAACTCAACATTCATCTTTGACCTCAATCAAATGGAGAAATATCCTC
TCCGCGATACAGCTTATGCAAGATCAAACGCCGTTTGTTATTACAATGGA
TATGGGCCTTGTTTTGGTTCGACGGATCTCTACGTGCGTTCAGGGTCATT
GGGAAATAAAGGCAGATGGGTATTCCAAGACGTCCCAAGTATTCAAACCG
GTCGTGAAGTCAGAATGGAGGTCTTTTACAAAGTTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000256_pilon | genome | sc0000256_pilon:414025..420942 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1546-1797:253 |
| Aaloc | 1279-1542:1208 |
| Aaloc | 976-1275:1702 |
| Aaloc | 745-972:2293 |
| Aaloc | 403-741:3006 |
| Aaloc | 319-402:3453 |
| Aaloc | 124-315:4434 |
| Aaloc | 1-117:6919 |
|
