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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000034_pilon:1177811..1181207- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040704.4 ID=XLOC_040704.4|Name=XLOC_040704.4|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3397bp|location=Sequence derived from alignment at sc0000034_pilon:1177811..1181207- (Clytia hemisphaerica_ch_hm2_pilon)
AATACAAACCACAAAAAATGTTTTTCAGTGCATTTATTTCTTCAATTTCA
GTCACAATAAAAAATATACAAATAACTATGGCTTCCAATGACGATCAAAT
AAAAGAACTTTTCCAAGCGGCTGATAAAAGTGGTGACGGAAAAATCTCAA
CCAGGGAACTCGGTAAAATGTTCAAATCAATCGGTGTGAAACTTTCCGTA
AAAGATGTCAAGTCGCTAGTCTATAAATTCGACGCAGACGGGAGTCGAGA
TATTGACTTGAATGAATTCCGCGCGCTCATCGCGGACGTTTTGAACGCGA
ACAAACAATACGAAGAAGCGTACGAAGTGTTCAAGATTTTCGATCAAAAT
GGTGATAACACGATCACAGTGGAAGAAGCGAAACGCGCATGCGCTAATCT
CCCTAAACCGTTGAGTGATGATGAATTTGTTGAATTCATGAAACGTTTAG
ATGCTGATGGTAACGGAGTCGTTCTTTTTGATGAATTTGCAAAAGCCTAT
GCTTGCGGGTTATAAAAAGTTGCTCTAGTTCTACCGTCCGACATTGTGGG
TTCAATTTGACTGTATCTCCTTTGTAAGATGGAGGAAAGATCTTGACAAA
CAATACTTTGGTGGTTACGAGCAAGCTCCTTCCAAGAGCATAATCATCAT
GTGAATTTTGGGTTTTTGGGACAAAGATAGTTATCTTAAGGGAAGAAATT
TTGGCGGATTTGGGGGATTTAATCAAAATCCGTGAAATTAAGATCCCGCC
AGATTAAATTTTTCAAGCCATCCGCTGAATTAAATTCCCTCTGAATGTGA
AAAACTTTTTCCTCTGTCCGCAAAATTAAATCCCTGTCAGAATTTCTTCC
CTATTATTTATTGAATTAATTAAGTTAGGGAGATTTTACTTACCTAATGG
GATAATTTTTATGGATGATGATTTATATAATTTGAAAATTAATAATATGA
AAAAGAAATTAAAAAAAATTCCCACATTTTTATGGTTCCTCTACCGGGTG
CGGCACAAAAGAGTTTCTCGCTATATTATGATCCTTATTGGACCATTTTT
GAACATTTGGATCCTGAGATCCTGAGATCCAAGTCTCAAGTCTCATGTTA
AAACTCTACCCTTCCAACCTACTTTAAAGCACTTACAAATCGATAGTGGT
TTCAAAACTTCCCGGTGGATTTCCCTTTTTTTCAAATATTACGACCATGA
TTGATTGTAGATCAAAAGTTATCCTCAATTGAATAAAATAGTTACTTTCA
GAAAGTGCCTGAAAATGTTAAAAAATCTACCTATCGTCGGAAATCGTCAT
TTTTCATATTTCCATCACATTTTTTCAACTTATTTAATCGTTTCTTTACA
GAAAAAGGTTCTTTATGATGATGCCCAAAACTTAACATGGTTTGATTTCC
AAAAAAATCATTCTTTGAACCCGAAACTCCTTAAAAATCGCCGGAACAGC
CAAAAACCGGCGTAAAACGGGGTTCCCTCGTTATACTCGACAGATTTTCA
TGGTTTTTTGCACAATGATGTAAAATAGCAATGCCCAAAATGTGATGGAG
CACACAGAACCGGACGGAAATGTCCCGAAAAAGGTGTTTTTTTGAAATTT
TCTCGAGATTTTATCATTAGTTTTTTGTTCATAGATGCACATTAGTAGTA
CTACCGAAAAGGTGTCGAAAACCGTTTACCGAATTGAAACATCCATATGA
GAGGACAGTAATTGAAGTGGCATTTAATGAAAGCATTCATTAAGCGTTTC
TTTTTTTTAAACTGAGATATGTGCTCATTCTGGCTAAGGCGGTTATTTTC
AAACTAGTTTTCTTGCAAAGATTTTCCATATGCGATTCAAACGAGATTAT
CGAAGGTTAATCCAAGAATCTTGGACATTTGGTATTGAAAACAATTTCTT
CTCTAATATTTAGATAGAGCGAATCGTCAATGATATTAATTATTAGCTGA
CCTTTGTCAGTATTGCCAACCATTTGATTAATTGCCATGTAAAGATTTTT
TCTGCTTTATGCTTGTGCCCTTAATTCTACAATGTCCAAACGGCCATCCC
CTTTTTCCAGCGTTGGGTTCCAGATTCTATCCCAAATACAAATTTATTGT
TATCAGAGAGACAGTTTTCCTTGTCCCCGTGACAACATGTTTCATTGTTT
AGGTGTTTTTATTTGACTTTTGAGAACTAAAGTTAAAATTTCGAGATGGC
GGAATCCTTCCCTCTACTTTACTGGACTCAACGTCATCAAAATGGGCGCT
GTGGTATAGTGGTCATTGACCTTGATTGCTGCACAGGCGACTGAGGTTCG
ATTCCCACTCGCAGCAGTTCACGCGGCAAGTGAATGAACCTTCGCCCGGG
TCAATTCATGCCATGTGAGGGGAATTGGGTAGTCAGTTCAAGGTGCTGAC
GGGGCGCTAATTGAAAGCGTCTATAGTTACGAAAATGGGCCTCTAAGCCT
CCTGCGACTCAACCAAATAGAAATAGAAATAGAAAAAAATATATTCAGAG
ATCAAAGTTCAGTCAGATGTAGATTCTAGTCTCCCCAGGTGCGCTGTAAA
AGGAAAAGAAGTTAAAGAAATAAATATTAAAAGTTAAACAGAAACGGGAA
CTAGTAACAGGATAAATTTCTAATTGAAATATGCCGGTTCAAAAGCGATT
TGAAAGTCAAAATTGTTCGTTTCAATTCGTTAGAAAGAATGACATGAAAT
ATCCCAGATGGATGTAGTTGAATTCGCGAATGTTAACTTTTGTACTTTTG
TTACTTGGACCAATATCGTGTCAATTTTTTCTTTATTCGATAATCTGAGC
AAATGTCTTCTTGGACTGCTCTTCTCACTTGCAGACTTAGGCATCAGTTT
TTTTTACACTGTTCACTTTTTCTTTTACATAGAATACAAACCACAAAAAA
TGTTTTTCAGTGCATTTATTTCTTCAATTTCAGTCACAATAAAAAATATA
CAAATAACTATGGCTTCCAATGACGATCAAATAAAAGAACTTTTCCAAGC
GGCTGATAAAAGTGGTGACGGAAAAATCTCAACCAGGGAACTCGGTAAAA
TGTTCAAATCAATCGGTGTGAAACTTTCCGTAAAAGATGTCAAGTCGCTA
GTCTATAAATTCGACGCAGACGGGAGTCGAGATATTGACTTGAATGAATT
CCGCGCGCTCATCGCGGACGTTTTGAACGCGAACAAACAATACGAAGAAG
CGTACGAAGTGTTCAAGATTTTCGATCAAAATGGTGATAACACGATCACA
GTGGAAGAAGCGAAACGCGCATGCGCTAATCTCCCTAAACCGTTGAGTGA
TGATGAATTTGTTGAATTCATGAAACGTTTAGATGCTGATGGTAACGGAG
TCGTTCTTTTTGATGAATTTGCAAAAGCCTATGCTTGCGGGTTATAA Coding sequence (CDS) from alignment at sc0000034_pilon:1177811..1181207- >XLOC_040704.4 ID=XLOC_040704.4|Name=XLOC_040704.4|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1044bp|location=Sequence derived from alignment at sc0000034_pilon:1177811..1181207- (Clytia hemisphaerica_ch_hm2_pilon)
AATACAAACCACAAAAAATGTTTTTCAGTGCATTTAATACAAACCACAAA
AAATGTTTTTCAGTGCATTTTGCATTTATTTCTTCAATTTCAGTCACAAT
AAAAAATATACAAATAACTATGGCTTCCAATGACGATCAAATAAAAGAAC
TTTTCCAAGCGGCTGATAAAAGTGGTGACGGAAAAATCTCAACCAGGGAA
CTCGGTAAAATGTTCAAATCAATCGGTGTGAAACTTTCCGTAAAAGATGT
CAAGTCGCTAGTCTATAAATTCGACGCAGACGGGAGTCGAGATATTGACT
TGAATGAATTCCGCGCGCTCATCGCGGACGTTTTGAACGCGAACAAACAA
TACGAAGAAGCGTACGAAGTGTTCAAGATTTTCGATCAAAATGGTGATAA
CACGATCACAGTGGAAGAAGCGAAACGCGCATGCGCTAATCTCCCTAAAC
CGTTGAGTGATGATGAATTTGTTGAATTCATGAAACGTTTAGATGCTGAT
GGTAACGGAGTCGTTCTTTTTGATGAATTTGCAAAAGCCTATGCTTGCGG
GTTATAATGCATTTATTTCTTCAATTTCAGTCACAATAAAAAATATACAA
ATAACTATGGCTTCCAATGACGATCAAATAAAAGAACTTTTCCAAGCGGC
TGATAAAAGTGGTGACGGAAAAATCTCAACCAGGGAACTCGGTAAAATGT
TCAAATCAATCGGTGTGAAACTTTCCGTAAAAGATGTCAAGTCGCTAGTC
TATAAATTCGACGCAGACGGGAGTCGAGATATTGACTTGAATGAATTCCG
CGCGCTCATCGCGGACGTTTTGAACGCGAACAAACAATACGAAGAAGCGT
ACGAAGTGTTCAAGATTTTCGATCAAAATGGTGATAACACGATCACAGTG
GAAGAAGCGAAACGCGCATGCGCTAATCTCCCTAAACCGTTGAGTGATGA
TGAATTTGTTGAATTCATGAAACGTTTAGATGCTGATGGTAACGGAGTCG
TTCTTTTTGATGAATTTGCAAAAGCCTATGCTTGCGGGTTATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000034_pilon | genome | sc0000034_pilon:1177811..1181207 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 58-543:487 |
| Aaloc | 22-54:3398 |
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