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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000250_pilon:291656..296310+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044378 ID=XLOC_044378|Name=XLOC_044378|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4655bp|location=Sequence derived from alignment at sc0000250_pilon:291656..296310+ (Clytia hemisphaerica_ch_hm2_pilon)
TCACAAACGCTTTATATCTTACTCATCTCAACCGTCATGTTCACAATATC
TCAAACCAAAACAGTCACTATAACATATAATATCGAACGAACTCAAACTT
ATGACGTCATTCTCAATGTGACGTCAGTTGACGCCTGCGCTGTATTCGTA
AACACAGAATATCATGACAACCAATGTCGTTGTATGAGGAATCATATGTT
TTTTGTGGTGGAAGATAAAGCAGGATGTTATCAAGCAAAACAAATAAACC
CTCGTACGGgagtattttttgtttactttggtCCTTATACCTTGACATTG
TAATGGCTTGTTCAAACAAAACCACAAAATTAAGCcttcttgaaaaaata
atctACCCTTAAATATAAAGAAAGTTTGCCGTCTTGAGCATCTCTTTAGA
TATCCTGCAAATATAAATTTGCTATAAACTCAAGAATTAGTAAACAGCTC
GATGTAAATAGAATAGATCCGAAGGCTTTTACAAAACCATCCAATCAGAT
CCATATTTAAAGTCTATCAAGGTTACCATCGATTTCTAGAAAGATGAAAG
TCAAAGCCTCCCTATTTACAACTTTTTTGCCAATGACTGTATTTAACATA
TTTTTCTATTCTCATCATTAGAATGCAGCTTAATAGACCAGTCATCTTTC
CGTGACCTTCTCGCACAAAGAAAACAACAATTTACAAAATCATTAACGAG
CGGCGATACAACTTTGAATTGCACACAGAAAGTTATCAATTATAATTCAA
ATGGGAAATGGATGTACCTGGAGATGCCTTCTTCTATTCTGGTATGTGAA
CCTATTGTTTTGAGAAAGTGTTATCtgttataatatttttaaaaatcatt
tcagCTGTTTCAGCAAAAGAACAGAGATTAAGGTTGACAAAACTATGCTC
ACAGACGGTTCTGTTTCCCTCCGAAACGAGATCAAttccattctattggt
tagaagtgacgtaaaaattgaatttaaccaatagagTGGCTTCATTTCAT
TTTGGACCCGAAACGTGTGAATATGGTCTTATCTTAAGACATTTGAACCA
AACAGACAAAAGTTAGATCATTTTGTTCTAGACAGAAGGGAAGATGGAAG
GCAAACTTTTAACCATCACTTATGAATGCAACAAAAATGATGACATGAAC
TGTCGTTTGCTCAAATTTCCTGGACATGATCAATGTAAGTTCACTACTGA
TGCTCTtttgaatgtaaaaattttattttaataagaTTTTTCTAATAATT
TGATAAATGAATGATGGAAAAGTTCTTCCGCCGATGAGCTAAAATCATTA
TTCAGTTCAGTTGGTATTTAATatgaataaaccagccgaggctggaaggt
cagccaatagagcttagctagatagctttaataagtgggttaacagatgt
aagagatgcactgaaacagagtagactaaatatgttgaataatgtacaaa
atgtgaaacatttgataacttgatttaaaattatgtaaaacgaGCCTGAG
AGCtctccaaaccccccccccccccccacgagaagctcaaagtatacttc
tctttagcattgtccatatagtacgtacgcaaagattttccaaatatttg
acaccccctcccccttgtacgcagagaacaatagaaatgactttgtttaa
acaatagatgtagcttttgctaaaccccctctccccccttcactgtgtac
gtactatatggatggcccctccagtctgggtaaataaattttgtagttta
ataccgtcaagttacacaacatgcacacaaccatcttaaagactttgctg
gtcgcaaatgataatcgaaagcaaaacttaaaattcataactatgcgggg
aagctcatttttcccccgttttgctttaaactcgcttttgattggtctat
gaatttgggcgaatgatttaccgccttggcataataaacacacaaccata
ataaataaattcaacagggcagcggtgtagcaattaatttcaactgggag
tcctctcttctgtgccaagcactggcagtgttttttaaactttaaaacaa
tgttaaatgaagaccagattgatctgtttgttatggctgtgcaagttgtg
acgagagtgtgcatgttgtgtaacttgacggcagcccgctttctgcaagt
ctgataagagatatctataaactgttatcgccattcagtcaaaatgtgcg
ccaaggttagaaaaggttagaaaaacacaatctgcgtccggaactgcgtg
aaaaatagtctgatcaatttcaacaagaactgtatatattaatattaata
taaatgatcaaattccaaagaccatttgtcataattttgcaagtccaata
ataggagatgtgaTGtcatcatttggttcccgtcatctgatttacggtca
gcaggtagagctggagagtcGgaaagcttttccgctgctttgctggattt
ccaccgtcgacctctgcacgctctgtgtttaaaatttttcaaatcgAAGT
AGAGacccgcatgctaatggagagtaaaccgaaaacaccagtttatccac
gatttctcaattttaaaattcggatcagtccacacgaattccctttcaac
aagatgatagctgcttcttaacagaaaaatattttcgactgaccggctaa
acgactcccactttttaaagtagaaatgacgggaaccaaacagttttttg
cgattcgcctttatcacaagcaagtccaagtccaaaaagcacgattgcat
ccagtcttatatcaaatttatacagtagctgtacttttgtaaactttatc
aaattccaataacattataacaccatcaatccccctagaggcaaacaaga
aaaatatgtttttattgcaaaaactattaaaaagcagcaataaaaagtat
cagaaaattcaacttaaacaaaaacttgagcaaacggctttaaaccttca
aaggatgtagaaaaagaatccccttgatgaaaatcatgtgtttgatttgc
cgagttaaaaaaataaatgttgaagcttgcaacagatttaccctggaaat
actttggtacaactctgacttatcacatctgactatcgcttgagccgcca
tcttgaaactacattatgatctgtaaaaacaacgcacgctaaaagtaccc
aaaaagttaacccgatcggaagaaagtttagaaatcaaagtgagatcgga
aaaccggatttttttttttgccgtcttatgatgatgatggaggaactgga
agaaaattttacctatttgaatgctcagcttaggctgaccaatgaATGGA
ATTTCACTAGTATAAAGATAAATTGTCTACCCTTTATGCCGCACCTGAAA
AAGTCACCCCAATAAATAATATGGCTATTCTTCTAAGAAacttaaaacaa
aatcaacctccaaattcaaaaaatctgaaaattcttAACCACCTGGAATC
TAGGGGGAGCCCAAGGCAAGATAACATTTGatgtaataaaatttcaatat
tttgattatcTTGCATTTGTAATCATAGACATCCACACGTTCAATCCAAC
AACATCGACAGTAGgaacgaacatatccataaaaacaaaaacatcaacaa
ctataacaacgaaagaaaagaaaataccaagaaaatatccagaatcaaaa
aacaaaaattcggGAAGCCATCCTCCAAAAACAACGACCAATAATAAGAC
CAACGAACAGAAAGAAACTCGTAAAAAATTGATGATCGCATTAGTCGTAT
GTGCTGTCTTACTAGCTGGTGTTGTTATACTGGCTATCATTATGGCCAGG
AGGTAAGCCATATTTGCTTTTCAATATAAACAACTCTTTCATATTACAAA
ATGACATTAGGCCCCGAATTTAGCTGCAGTCCTAATTAcaatagcaagtt
tatgtaaATGTGTTTTTGGACGGAAACGGTTAGCTTTtgatttgtctaca
tcctgactgactgaggacgacggtaaatcagcaatTTAAACGTTCTCGAT
TTTTCAGGTCAGAACATCATTTTAAAATCGCGCTCCACCGTTCCCAAAAG
TGAatgaaaatacataaactcgctgttGACAACTCTTTTACTACTGTACA
GTATTAAAGCCTATACACACAATACTAACGTAAACTGGTGAAGGTTTCAA
ATCCATCCCTACATATTCTCATGGTTCTTCTGAAAACGTATTAAAGAAGA
CGTTGTTAAACTTACTGTGAATAACTTCAGTCATGATGAATGAACTTTTA
ATTAACAGTTTTCTTCCTTCTCTTCACTATAGGTATCTGAAAATTAAGAA
GATGGTAAGAACAATTGATTTGCTTTATTTTGAGcaattgaaatattctt
ttgtatAAATGTAATAAACCAATAAACCAGAGTAAAATCAACTTGAAAAA
TCCTGTACCATAGTCACGAAAAGACAGTCGATAATACTTTTTAAAGGATA
CTAACTGCTGTGGGTTTAAACCGATCGGAGATTGGTAAAGCCTTTTACCT
GTTAGAACTCAATTTTATCTGATTCTCGAggctgaaaaagaaataaaaca
taTAAGTGTACATAAATGTTATTCTTCTAGACATCAGATTCAGAAGTTGC
GCGTCTTCATTCACCTCCAAGTGACGAAAACACCAAAACATCACCCAAGA
AGTGA Coding sequence (CDS) from alignment at sc0000250_pilon:291656..296310+ >XLOC_044378 ID=XLOC_044378|Name=XLOC_044378|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1794bp|location=Sequence derived from alignment at sc0000250_pilon:291656..296310+ (Clytia hemisphaerica_ch_hm2_pilon)
TCACAAACGCTTTATATCTTACTCATCTCAACCGTCATGTTCACAATATC
TCAAACCAAAACAGTCACTATAACATATAATATCGAACGAACTCAAACTT
ATGACGTCATTCTCAATGTGACGTCAGTTGACGCCTGCGCTGTATTCGTA
AACACAGAATATCATGACAACCAATGTCGTTGTATGAGGAATCATATGTT
TTTTGTGGTGGAAGATAAAGCAGGATGTTATCAAGCAAAACAAATAAACC
CTCTCACAAACGCTTTATATCTTACTCATCTCAACCGTCATGTTCACAAT
ATCTCAAACCAAAACAGTCACTATAACATATAATATCGAACGAACTCAAA
CTTATGACGTCATTCTCAATGTGACGTCAGTTGACGCCTGCGCTGTATTC
GTAAACACAGAATATCATGACAACCAATGTCGTTGTATGAGGAATCATAT
GTTTTTTGTGGTGGAAGATAAAGCAGGATGTTATCAAGCAAAACAAATAA
ACCCTCAATGCAGCTTAATAGACCAGTCATCTTTCCGTGACCTTCTCGCA
CAAAGAAAACAACAATTTACAAAATCATTAACGAGCGGCGATACAACTTT
GAATTGCACACAGAAAGTTATCAATTATAATTCAAATGGGAAATGGATGT
ACCTGGAGATGCCTTCTTCTATTCTGAATGCAGCTTAATAGACCAGTCAT
CTTTCCGTGACCTTCTCGCACAAAGAAAACAACAATTTACAAAATCATTA
ACGAGCGGCGATACAACTTTGAATTGCACACAGAAAGTTATCAATTATAA
TTCAAATGGGAAATGGATGTACCTGGAGATGCCTTCTTCTATTCTGACAG
AAGGGAAGATGGAAGGCAAACTTTTAACCATCACTTATGAATGCAACAAA
AATGATGACATGAACTGTCGTTTGCTCAAATTTCCTGGACATGATCAATA
CAGAAGGGAAGATGGAAGGCAAACTTTTAACCATCACTTATGAATGCAAC
AAAAATGATGACATGAACTGTCGTTTGCTCAAATTTCCTGGACATGATCA
ATACATCCACACGTTCAATCCAACAACATCGACAGTAGgaacgaacatat
ccataaaaacaaaaacatcaacaactataacaacgaaagaaaagaaaata
ccaagaaaatatccagaatcaaaaaacaaaaattcggGAAGCCATCCTCC
AAAAACAACGACCAATAATAAGACCAACGAACAGAAAGAAACTCGTAAAA
AATTGATGATCGCATTAGTCGTATGTGCTGTCTTACTAGCTGGTGTTGTT
ATACTGGCTATCATTATGGCCAGGAGACATCCACACGTTCAATCCAACAA
CATCGACAGTAGgaacgaacatatccataaaaacaaaaacatcaacaact
ataacaacgaaagaaaagaaaataccaagaaaatatccagaatcaaaaaa
caaaaattcggGAAGCCATCCTCCAAAAACAACGACCAATAATAAGACCA
ACGAACAGAAAGAAACTCGTAAAAAATTGATGATCGCATTAGTCGTATGT
GCTGTCTTACTAGCTGGTGTTGTTATACTGGCTATCATTATGGCCAGGAG
GTATCTGAAAATTAAGAAGATGGTATCTGAAAATTAAGAAGATGACATCA
GATTCAGAAGTTGCGCGTCTTCATTCACCTCCAAGTGACGAAAACACCAA
AACATCACCCAAGAAGTGAACATCAGATTCAGAAGTTGCGCGTCTTCATT
CACCTCCAAGTGACGAAAACACCAAAACATCACCCAAGAAGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000250_pilon | genome | sc0000250_pilon:291656..296310 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 823-897:4581 |
| Aaloc | 802-822:4284 |
| Aaloc | 529-798:3531 |
| Aaloc | 424-525:1082 |
| Aaloc | 256-423:624 |
| Aaloc | 1-252:1 |
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