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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000174_pilon:461949..465377+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037247 ID=XLOC_037247|Name=XLOC_037247|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3429bp|location=Sequence derived from alignment at sc0000174_pilon:461949..465377+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCAACTATAATCTATAAGCAAGATATTGATGATAATCGTCCAATGAC
GGGTGATGAAACAGACACTGAAGATGCTCATTTCAAATATGTCACATCAC
CGACTCTAGCAAATGATGCAGCTGCATTATCAGATAGTAGTCTTCAACGT
GAAAGTAGTATTGACATTGCAGAAGAAATGAATGGTATGCAAAGTGGGGG
GACTGCTGGTGGTTATAATGACAAAGAAATGTTGACAGAAAGCTTCAGTA
AGTTTTCATGTTATATTGAAAGATAAGGTTTGCGTAAAACAACAATTGTT
TGATTGAAATTTGTATCCTATTTTGACTCACATTATGGAGTAATTGTCCC
AGGGACTATATGAAAATTGACTAATAACACTTACAGACAATTTGTCTTTT
TAGTAAAATACTGACTGACAGGGCaataattcataaaaatagACAGCCAG
AAGGTTgctcattttaattttttgaaaatataatattaATACTAAATTAA
TAATATCAGTCTTTACACAGCATCATCAGATGCAGTCTCATCTAGCTTTA
AAATGAGAACTTAACTTGAGGAGTTTTTCTTGGAGGCTCTTAAAATAAGT
TCTTTTTACACAACATtatccatttttattttttagtgacGCCAAGATTG
ATGGAGGATGAATCAGAAAGCTTATCTTCAGATTTCAATCTCTACAGTGA
TGAAGAGACAAGCTCTATTGCAGGGTAATTACTTATtttcatactttctt
tttggGTACAAACTTTATTGGGCAGGTGTCACTCAATCAACATTAGAACT
ATTATAAGAAGGATGCCCTCTTAAGTTTATATTGATCCAAAATATAAGAA
GATGAAACACTAAAGTCAAAAGGTTAGCTGAGAGAATCACCAAACAAATC
TATGATGTGACTAGACATTGCaggttaaaatgaaattttgtttttttgtt
tgacaCTTTCAACATAAGGCTTGACAAAGAGCTTTTCAACTTTAGCTCTA
TTCATTCATAAAAGATGATTCACTGTTTGTTACTTCATTTTTTAGAAGTT
TTGATGAGTTCGGTAAAGACGATTTCGAAGATGACAGCGCCACTTCCGAA
CCTCAATCAACTGTTTCAAGAGAggtaaaattattaaaaaagaagaaaag
tttggAATGAGATTTTGAGAAATCTATaatgccaaaaaattaagaattaa
aaagcttcaattcaatatcatatctacttttgaaccaatcacGTGCACAG
TTGAGTCCCACAAAAGATGAAATGAACAGGGTTTGCCCCCTATTAGTTAT
CCaaattcttaaaattatttgaaagattttaagatGCTGACttctatttt
aaaatcagactgTCCCTTAGTCTGTCTATAATTGGCAATGGAAGCAATAA
TGGCTAAAGTATAACTTTTGTTAGCCAAATTCAATGTTAAGAATTTTTTA
GCTGTGTTTTAGATAATCATTGTTGAATGTAATTTCGGtcgaaaaatctg
caaaattatAGTGACTAAATTTGCAATGGAAAAATTGAGTTTCAGTTGTC
CTTTTTCATGTATGTTAAGAACGTTTCAAAGTAAACCAACGATTTCCTCA
GAATATATTATGTATACAGGGTTGCCACGTCTGCCGAAAAAGTCTGGAAA
AATTTGgcgattttaagcaaaaatatctggaaaaaattgaggtttttggg
caaaagtctggaattttgaaagtttcctaCCCGTGACAATACTGTGTATA
TTACCGTCCCCAAAATACTCCTTTGTAGTGTGTGTTTGTAATATTCATTT
CCTCCACCTTCTATCActataattttatttattaatgTCTTACAGGAAAT
GATGAGAAGGAAAGCATTAAAGAAACACTTGGATCAGTTGGGAGATCTTG
TTGTTGAGAAAGAATTTGCTGTACAACAAGCAAGGTACTAAATGTATCCA
TCTGTCTACTTAACCCATCTAATGTACTTGTTACATAATGTGAAGAAAAT
TGCATACCTTTATAAGctgtatcttttgaaaataCTTATTTTCATTTAAC
ATCACATCAACCTTTTATTTTTACTCCATAGAAGAGATCTTCGtattcat
tttttgttgaacATAGcagaaagttttattttttactttttatctctGGC
TCTTCAATATTTACCTGAGCTAGGTAAATTTAGTGCTAGTGGCCTAGAAT
GGTTTTGGATTGATGAGTACTCAATGATCCAAGAAGATTTTACGGCCCAT
ATAGATCAGTGGGGGATTATCATCTTGCTTAAATCTTTTCTCTCATTGTT
TTAGGGAAGAACTTGCAAAGTGTCAAAATCATTTAAAAGGACTTGAAGAT
GAACTAGAAACTGTTGAAAAGGAAATCAGGGACGCTGATAATAACAATCA
AAAGTATGATAAACATTCTTTTACATTTCACTGTCTCCTAAATCTCTAAG
GGCACATAAAATCACATCACATCATCATCCGGGAGGAGGGGTACTAGGCT
TGCAAGATGACAGGTATGTCTGaaccaaagttcgaaaattgtctcttaga
gagactgattttcgaaaattttgtccattCTTTGACGATTTTGAGAGACT
TTTCCCCCAAATATTTCagccaaaatctttaaattttaagccaaaTTTCA
AGACCTTTCGAGGGAgttgattttagatttttgtaatcttggaaccctta
cagagactcgtttgctttttaatggtttttgtccCCTTTTGAGGGACTTt
caagggtgtgaaaaagggtcCCTAATGGCTCACACatcccggcacccatt
ttgcctaagtccccccccTCCGGCATCATATATTATAAAAACCCTGTCTC
TGTCAATGGGGTATGAAATTCAGGGTGTTTTCGGAGCAAGTACAAATTCT
TAGCTTGGGGTGCCAGGGGCTAAAGACGCTGGTGTAGAATGTGCAGATCT
ATTGGGAATAATAATACTCGACTCACTTTACTGtggtaaaatatttaaaa
ttcttTGTAACCCTCTTCTTCCATCGCGCATGACTACAAGCTCAAACTCA
AAATTATTTATTACCCACAAAATAATTTATTGTTGCCATCTTTAGATTGA
CATTGATGCCACTTTTAATGACGGATATtaatttgatgttttaaaatgat
aaaaaggccattttcaaaaaaaacaagaacaaaaaaacggaaaaTAATTG
CGGCACTAGATTTTCTCTTCTTTAAGACACTATTTTGAAATTGAGCATCA
GTTGTGTAAACGACGCTCTATGTCACAATGACCACTATATAATATCAAGT
TTCTGATTTCGGATTTTTAGAGCTACATACTTTCGATTGAAGAGTAAGAA
AGAACGCTTAGTTGCAGAGATCAAAGTGGAAAAAGAAGTCGAAGAACGAG
CAATACAAAACGTTGATACAGCCGAgtaa Coding sequence (CDS) from alignment at sc0000174_pilon:461949..465377+ >XLOC_037247 ID=XLOC_037247|Name=XLOC_037247|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1422bp|location=Sequence derived from alignment at sc0000174_pilon:461949..465377+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCAACTATAATCTATAAGCAAGATATTGATGATAATCGTCCAATGAC
GGGTGATGAAACAGACACTGAAGATGCTCATTTCAAATATGTCACATCAC
CGACTCTAGCAAATGATGCAGCTGCATTATCAGATAGTAGTCTTCAACGT
GAAAGTAGTATTGACATTGCAGAAGAAATGAATGGTATGCAAAGTGGGGG
GACTGCTGGTGGTTATAATGACAAAGAAATGTTGACAGAAAGCTTCAATG
TCAACTATAATCTATAAGCAAGATATTGATGATAATCGTCCAATGACGGG
TGATGAAACAGACACTGAAGATGCTCATTTCAAATATGTCACATCACCGA
CTCTAGCAAATGATGCAGCTGCATTATCAGATAGTAGTCTTCAACGTGAA
AGTAGTATTGACATTGCAGAAGAAATGAATGGTATGCAAAGTGGGGGGAC
TGCTGGTGGTTATAATGACAAAGAAATGTTGACAGAAAGCTTCAtgacGC
CAAGATTGATGGAGGATGAATCAGAAAGCTTATCTTCAGATTTCAATCTC
TACAGTGATGAAGAGACAAGCTCTATTGCAGGtgacGCCAAGATTGATGG
AGGATGAATCAGAAAGCTTATCTTCAGATTTCAATCTCTACAGTGATGAA
GAGACAAGCTCTATTGCAGGAAGTTTTGATGAGTTCGGTAAAGACGATTT
CGAAGATGACAGCGCCACTTCCGAACCTCAATCAACTGTTTCAAGAGAgA
AGTTTTGATGAGTTCGGTAAAGACGATTTCGAAGATGACAGCGCCACTTC
CGAACCTCAATCAACTGTTTCAAGAGAgGAAATGATGAGAAGGAAAGCAT
TAAAGAAACACTTGGATCAGTTGGGAGATCTTGTTGTTGAGAAAGAATTT
GCTGTACAACAAGCAAGGAAATGATGAGAAGGAAAGCATTAAAGAAACAC
TTGGATCAGTTGGGAGATCTTGTTGTTGAGAAAGAATTTGCTGTACAACA
AGCAAGGGAAGAACTTGCAAAGTGTCAAAATCATTTAAAAGGACTTGAAG
ATGAACTAGAAACTGTTGAAAAGGAAATCAGGGACGCTGATAATAACAAT
CAAAAGGAAGAACTTGCAAAGTGTCAAAATCATTTAAAAGGACTTGAAGA
TGAACTAGAAACTGTTGAAAAGGAAATCAGGGACGCTGATAATAACAATC
AAAAAGCTACATACTTTCGATTGAAGAGTAAGAAAGAACGCTTAGTTGCA
GAGATCAAAGTGGAAAAAGAAGTCGAAGAACGAGCAATACAAAACGTTGA
TACAGCCGAgtaaAGCTACATACTTTCGATTGAAGAGTAAGAAAGAACGC
TTAGTTGCAGAGATCAAAGTGGAAAAAGAAGTCGAAGAACGAGCAATACA
AAACGTTGATACAGCCGAgtaa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000174_pilon | genome | sc0000174_pilon:461949..465377 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 604-711:3322 |
| Aaloc | 505-600:2306 |
| Aaloc | 415-501:1846 |
| Aaloc | 337-414:1047 |
| Aaloc | 250-333:639 |
| Aaloc | 1-246:1 |
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