|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000080_pilon:609449..616350+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037466 ID=XLOC_037466|Name=XLOC_037466|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6902bp|location=Sequence derived from alignment at sc0000080_pilon:609449..616350+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGACGTTTTACTGTGTTTTCTTGTTCATGCTTTACTTGCTGTCATA
TTTGCATCGGACGATTTCAGTTCCAGGAAGAACAGGCTTaggtatgaatt
ttttttatcaaccgAATAAAAGTCCTTATACTTATGACccatattttgat
tatttctagcAGAAGGCTTTGAAATATTTCcggacagttagtcacactag
cgtcccgccaaaatgcgtatcaaagattaatgctgcgaaagcgctatatc
gtttacctgactctcaagcaaaaaaatgcgccgcaaaacttctaaaggga
tttatcaaaaaataacccggcgctttttaatgaaattagcattttcaaaa
actttgagaaattgcctaaaatttgagccatagataaaaaaatttgagcc
aagccaaccttgaaaactaatttgaagatcaatttcccaagaaaaagatc
tacaggggaggcggaacccacctagatccgcgcactgccggataggctat
ctcccggaaattttgccggacctcaaacaatgacccatttacatgtgcgt
aattgtttttactttagcgtataaacaaggccttaaaaatcgaagcgctg
tctcgggaattgaatggcaaattttggttggctgattttggctgctgcac
gttttattttgtttcaaacgttcaagttttaattaattgtcttgcgaact
tgattcaggtaactctcatccttgttgtgcaaatgcatcctgtagatgac
tgatgttgttttttctgaaagctagattttctAGTGTGACTAATTGCCGG
GGGTACTAAAAAGTTTGTGACAAAAGTATGTGGACAAATTAGCTTTTTTG
ACATCATTTTCTCAGCACCTATTCATCCTATGTTAGAAaattatacaccg
ttggaaagatatttccaagaaaaatgatattaaggaaaaaatatttttga
ataatactttttttttaaatcatggcatgaaatttctttaaatatttgag
cctttttgatttcaaatctgtattcagatttttcatatctttcttggaag
gaagaaagaaagaaaaaatctgaACCATTTGAAGGCAGAAATGCTCAAAG
TCTTAGCCCAGCTGACACAATACGTTATTTCATCTAAAGTTATATGAACG
CTGTGGACATTAGATCAACGTTATAACAACGTTATGTATCAACTGGGAAG
GGTGCCTTGCACTTCTTTCCTCTCcacttttattttctttctcaaatcTT
TAGAGAAGAAAATCACAAACTCAAAATTAACCTTCCAACAAGGTATAGCT
AATAATCAAAAGCAATGTTTACAAATTTAGGGAttaccaatttttttgga
aCGAATTTATTTGGGGTTTATTTAAAATGCCCGTTATTTTTTAGATGAGG
AATTCCATTGTCATCCGAACGGTATGACATTTGTAATATACAATTTTACC
CTGTATGAAAGAAATAATATTACaataaagttcaaaaatgttACCGGAAA
AGCAGCTGGAGACTGCACTCGAAAATATACGCAAGAAGTGAAAGTGCCGC
CTGCACTAAGAGCTCCATACAATGAATGTGGCATAGAATCCCATCAGAGA
AATGGTGAATTGGTTTACACTCAGACAATAATTGTTTCTTATAACGAAAC
AATCTCGGTTGAAAGACTGGTTTATCGAGAACACATATTTGATATACATC
TCGAATGTACTATAAGTAAGCTTCATGAAGTCGAGTTGGATGGCTACCTC
AACGTGACGAAATCGAAAGAACGAGTATTTACAAAAGGTACGTCTATTAA
TAtaattttgtttagaaaatgaatttaaaatttactcttgtctcccgaat
agatgGGGGTCCGAAGAAGCAggggggggTCCGACTAATCTTGCTTCACA
CCCTtttcaatccaatgtgaaaaaagcttctgaattaaaattgatgagta
agcaaacgatatcactattatttaaaaacaaaacttttaaagaaattgCA
ATAACTAACCCCTTTTATCATAAGTAACACGcgtttttcaatgttttatt
gaatatttcctatctatataggaaatatttgttaaaacggtaatttttct
tcttctccaagtctaacgctcggttttggtcaatttcgtgagtttgtaca
tgagtctctttttaaatcaagctccggcggtaaaaacagtaggaagtttt
tttttcgaggcggaagacgtcatatCTTCGAGGaacgtctgtggtaaata
tccgtacggtgctctattctccttgtcgatcgggcagcgtcggccgtttc
agaagcgtattgttgatcggaccatacctactgctttgtttctaactgtc
aaaacaaagatggttgaaaatagacaacaacttttgctttttcgctactt
ttctttggtttggtttatatgctttgatgagttgaattggatcatgattt
ttgtacgattgtcacaaggaatggtcgatagtaaacttttcttaatattc
ctttctggatttgatcTTTCGTTTACATCCTGTTGGTTTGGCTGGAATGA
GCTGGAGAGAGATgatacaatgctggacaaaaggtttgtagacttctgca
atatttgcaaaatacttcaatatcgatcaaaaacaagttcccaagaggct
ctgggtgctttccaaacccatccaaagtctttcaaagtcacccactgcag
tctaaccgcaagggcaaaccacaagggcttgattaactggcttacaccag
tatcaaaacgctgattttttgcttgtggttccctcaaaagcaattcaaaa
gcaatgcaaagacttcgaaagtgtttttcttaacttccgtcccctttcag
acacattgaagagtcattttgctctatttctcatcatttttcactgaaat
ttcatttgtctacaaccttttgtccggcattgtacAATCTCTTGCGTCTT
GGAatgaaaaacaggacattttatcaagtttcacaacaaactaacttcaa
ttttgtttgtatatttacataaatcgtacaaaggcaagtgactgtgaata
aatctgaccatgttatacctgaaaaattacatacttgcaatcaatatgaa
aaaagtttgcacccaacgaatgcaatgccgacaatgcaacaatgggaatg
gttgatgaactgattttagctaaaaatttaaacatggagcaaaattgact
ggttaatgattgaatttcccttggtttttttatctacaacaatgaattaa
ctgctggggttagtgacagttagtgaaactcgttgcggttataaatttca
aattttaaagctgataaccggatccggaacaccacggccccaatatgaag
aatgttatgttatacttcttaaaaggtttatcgcattgaatatggatgta
aataatttgaaatcacctcacatgtacaattaaaatttttcttgaacttg
gagattttcttccccgcgtgcattttataacgtggaaaactttagttgtg
aattttagagatcttttgtaacttgtgttttaaacgtagaaacttttgtc
gtgaatttggagattttcttacagtcaactgctccaacttgggcctatct
gacaaaacatgggacggcaatttggccaccatttcgccgaacctccaaag
tcatttgatttgagttaatgaacaacgtattaaaaaatggcaaaacgatg
gagcgtttgacgtcactcgcgcggcaagttacacacgcgttatttgttaa
tcccgataggcggttaggcagcgggtgttctctaattctccaatcggcgc
tatcagtgaaagttatcgtgacatgttatgaaaggaagtatgattgataa
acttggtggagttatcaaaacaagtttgttgtcaaagagatttaacacaa
gttagtgaaaatacagaccagatatcaaccagtcccatgtttcgaccaat
cgtcccaagttaaagcagttgacggtatgtacatttaaaatgtggaaact
tttgtgataaatttggagattttcttacacgtgcattcaaaacgtggaaa
acttttgtcgtgaacttgacattttcttccacatgcatttaaaaaatgaa
gaaaactcgaGTGATTTCCTGgtatgacaatttattttattttctgagat
ttttttggacattttgattgtttccaagtacagtatgtgacattttttgc
tcttgcagcatgcttttggaaatcataaaatggcttctgttaggggaatt
ttttcctatcgacattctttcagattatgaaatgtttcccagtatataaa
aatgagatttttttttttttttcattctgttggaaaatatgaaattgttt
ccctgttttgaaagatttttactttttagcacgtacattatttcaaaaaa
ctccaaaaattactttaaatttttacattttttacaatattttatatatg
aaagtataatgcaaaatatttcatctcattttgaaaatatataaaatttt
ctttggttttcttactgtgaaatattctcctttttgtctatctttcattt
taaatatttgccctttttggctatataatatttctggaaatcagcgctta
aaatttaataattatataatcagcTCTTTTGATGTGTTTAACAACActac
ttggcggtgcgacgccgggtgaccgctagtataatactaaaatcatttaa
agtccacctaacgaaaattaaagttccagccaatttgattactgcattgt
tgttctcagtcgggttcagcttggatatatttcgtgatccgtagctttga
aaCTACAGTCATCTCATGAATAatcataaatggaattttgaaattcttag
ggacttgtgttgcttgatgttatctgagatttaaagcactttgaaatctt
ttgaggacatcaattattattttaacatttgtaaaggaaatatttatccg
catctttgcggctcttgtttatttttaaagttGGTGATGTTACAATTGAC
CTGCAAATGATCCGGTTTACAGATGCCACTTTTACCAAGGAAGATATTTC
CCCCATACTAAAATTAGACAAGTTTATGTACTTTCTAATCACGATGTCTC
CTGACAATGGGTTCTTTTTGTCTCTGCAACAATGCTATGCTACTAATGAA
TGGAATTCTACCGAGAGGCACTACATAATAGAAGACAAGTGAGATTTATT
GTAAAGATTTATACTTGGGTCACTACAATATAACCCTTTTGATACCCTTG
TATCACATGGGAAAATACCTTATAATTTCAGCCCAACTtggaaattaaat
tttatttcatccccatttgaaattcaatgtttgagAATTGCACTTCAAGA
TCATTGATTGCCACTGAATTTTTAAACCTtagaacaaaggaatttctatc
accattgggatttcaatagaaatttttatccacactgagaaaaaaagttc
caccggggctgtgagacaggggtgcccTTTGTCTTGGGAATACacctttt
ttgttaaaatacacAGGGGGCTGTGTTTTAACAAAACACCCAGTTCTTTG
ATGAAGTTGGAGACATATCTCTATGTCTCATGACTGGTCTTTCTAAGACT
TGGGGGTAATTAACAATttataatagacgatatcggcttaaccgaattct
ccccgaatgattacccatgatgcatcgcgcaaaaaaattcacggacgata
acccaaaccctaacaatgcatcatgggtaatcattcggggagaattcgga
aagccgatatcgtctattggaaatgacattcttagcttgagtagcaaaat
tccatgatggtgttattcttagcattattcttaattttttgcccattttc
atcatggacattcttataaagtgtattcttataaaagtgtGTATTCCTTG
GCTTATTCTAGATGTCCAAACATAGACGATAACACTGTACAGATTATGGA
AAGTGAACACCCAACTGCTGTCATCAAATGGCAAAGTAAAGCATTCAGAT
TTTTTGAATCAAATTCACTCTTCATCAAATGCGAAGTTTTTATTTGTGAT
CCAGGAAGCCCTTTTCCACATCCAGAATGCATGCCTTGTGATCTAAGTCT
AGTTGATAAAAAACGTCGTGGTTTGAGATCACCCAGTACTGATGAATTGA
AGAAATCAACTGTAACATCAAAAATGTACTATTTAATtggtgagtgtttt
ttttttgtattacaCTTTCCAGGcgggaaaaagaaaaatatcaaaacaga
aacaaaagtagaaaTTGTTTTCCCTCCTTCTCTTTTATAATGACTTCAAA
GGacacaaaatatttttcgaatttttcacaAGGCCTAGAGTTATGGTGAT
TCAATCACGTAGATGGTAATTGAATGTTCGATTAGTGAGTCGAGAACAAG
TTGCCTCTGAATGCGTGGTCACAGACTATTTGTTATGTACTACtcgtttt
ttctataagaacaaactatataagaatataaggttTCGCTGGCCAAAacg
ttaagaacaaattaaaaacattttaaggctttaaaactcaaaaacaccct
attttttaaggaaaatggtcaaaaacattcacaaaatggtcaaacaaGCA
CATGTtaagattcaaaaaattttgatgttcttataaaaaacgtgtttgtA
TGTAAATAGAAAGTTTCTTTACATTCAGGTGAAGAAGAAGACCATTATGC
TCcagaaaaccaaaaacaaccagcCATCTTTTCTGGTACTAAAGGCACAA
TCATCTTGGTATTgttgattctttttattttggctgttttgatttgtttt
atcaAGAAATTCATTGAGTTCGTTGCAAAGTACAATGAACGGCATGCTAA
AGACGTGAATCTAGAAGAAAATACTCAGAATGTGAACGAAGAAAAATTAT
GA Coding sequence (CDS) from alignment at sc0000080_pilon:609449..616350+ >XLOC_037466 ID=XLOC_037466|Name=XLOC_037466|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2388bp|location=Sequence derived from alignment at sc0000080_pilon:609449..616350+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGACGTTTTACTGTGTTTTCTTGTTCATGCTTTACTTGCTGTCATA
TTTGCATCGGACGATTTCAGTTCCAGGAAGAACAGGCTTagATGGAGACG
TTTTACTGTGTTTTCTTGTTCATGCTTTACTTGCTGTCATATTTGCATCG
GACGATTTCAGTTCCAGGAAGAACAGGCTTagATGAGGAATTCCATTGTC
ATCCGAACGGTATGACATTTGTAATATACAATTTTACCCTGTATGAAAGA
AATAATATTACaataaagttcaaaaatgttACCGGAAAAGCAGCTGGAGA
CTGCACTCGAAAATATACGCAAGAAGTGAAAGTGCCGCCTGCACTAAGAG
CTCCATACAATGAATGTGGCATAGAATCCCATCAGAGAAATGGTGAATTG
GTTTACACTCAGACAATAATTGTTTCTTATAACGAAACAATCTCGGTTGA
AAGACTGGTTTATCGAGAACACATATTTGATATACATCTCGAATGTACTA
TAAGTAAGCTTCATGAAGTCGAGTTGGATGGCTACCTCAACGTGACGAAA
TCGAAAGAACGAGTATTTACAAAAGATGAGGAATTCCATTGTCATCCGAA
CGGTATGACATTTGTAATATACAATTTTACCCTGTATGAAAGAAATAATA
TTACaataaagttcaaaaatgttACCGGAAAAGCAGCTGGAGACTGCACT
CGAAAATATACGCAAGAAGTGAAAGTGCCGCCTGCACTAAGAGCTCCATA
CAATGAATGTGGCATAGAATCCCATCAGAGAAATGGTGAATTGGTTTACA
CTCAGACAATAATTGTTTCTTATAACGAAACAATCTCGGTTGAAAGACTG
GTTTATCGAGAACACATATTTGATATACATCTCGAATGTACTATAAGTAA
GCTTCATGAAGTCGAGTTGGATGGCTACCTCAACGTGACGAAATCGAAAG
AACGAGTATTTACAAAAGttGGTGATGTTACAATTGACCTGCAAATGATC
CGGTTTACAGATGCCACTTTTACCAAGGAAGATATTTCCCCCATACTAAA
ATTAGACAAGTTTATGTACTTTCTAATCACGATGTCTCCTGACAATGGGT
TCTTTTTGTCTCTGCAACAATGCTATGCTACTAATGAATGGAATTCTACC
GAGAGGCACTACATAATAGAAGACAAttGGTGATGTTACAATTGACCTGC
AAATGATCCGGTTTACAGATGCCACTTTTACCAAGGAAGATATTTCCCCC
ATACTAAAATTAGACAAGTTTATGTACTTTCTAATCACGATGTCTCCTGA
CAATGGGTTCTTTTTGTCTCTGCAACAATGCTATGCTACTAATGAATGGA
ATTCTACCGAGAGGCACTACATAATAGAAGACAAATGTCCAAACATAGAC
GATAACACTGTACAGATTATGGAAAGTGAACACCCAACTGCTGTCATCAA
ATGGCAAAGTAAAGCATTCAGATTTTTTGAATCAAATTCACTCTTCATCA
AATGCGAAGTTTTTATTTGTGATCCAGGAAGCCCTTTTCCACATCCAGAA
TGCATGCCTTGTGATCTAAGTCTAGTTGATAAAAAACGTCGTGGTTTGAG
ATCACCCAGTACTGATGAATTGAAGAAATCAACTGTAACATCAAAAATGT
ACTATTTAATtgATGTCCAAACATAGACGATAACACTGTACAGATTATGG
AAAGTGAACACCCAACTGCTGTCATCAAATGGCAAAGTAAAGCATTCAGA
TTTTTTGAATCAAATTCACTCTTCATCAAATGCGAAGTTTTTATTTGTGA
TCCAGGAAGCCCTTTTCCACATCCAGAATGCATGCCTTGTGATCTAAGTC
TAGTTGATAAAAAACGTCGTGGTTTGAGATCACCCAGTACTGATGAATTG
AAGAAATCAACTGTAACATCAAAAATGTACTATTTAATtgGTGAAGAAGA
AGACCATTATGCTCcagaaaaccaaaaacaaccagcCATCTTTTCTGGTA
CTAAAGGCACAATCATCTTGGTATTgttgattctttttattttggctgtt
ttgatttgttttatcaAGAAATTCATTGAGTTCGTTGCAAAGTACAATGA
ACGGCATGCTAAAGACGTGAATCTAGAAGAAAATACTCAGAATGTGAACG
AAGAAAAATTATGAGTGAAGAAGAAGACCATTATGCTCcagaaaaccaaa
aacaaccagcCATCTTTTCTGGTACTAAAGGCACAATCATCTTGGTATTg
ttgattctttttattttggctgttttgatttgttttatcaAGAAATTCAT
TGAGTTCGTTGCAAAGTACAATGAACGGCATGCTAAAGACGTGAATCTAG
AAGAAAATACTCAGAATGTGAACGAAGAAAAATTATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000080_pilon | genome | sc0000080_pilon:609449..616350 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 973-1194:6681 |
| Aaloc | 694-969:5913 |
| Aaloc | 487-690:4983 |
| Aaloc | 94-483:1397 |
| Aaloc | 1-90:1 |
|
