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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000163_pilon:142395..144920+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040886 ID=XLOC_040886|Name=XLOC_040886|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2526bp|location=Sequence derived from alignment at sc0000163_pilon:142395..144920+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGACATTCCTACTGGTGGACCCTGATAAACTCTCGCAACCGTACAC
CGAAATCATCAAATATGCTACCATTGTCGGCCGAGAGGATCCTGAAGGAA
CCCGAGCTCGTTATTTCGATCCTGTTCAAATAATTTCACTCGAAGAAGAC
GGATGCTCTAACACTGATCAGTCACCAGACAGTATGTATAGAGCTTTACA
TAATGAGAATGTAAATGTGAACAATACCTTAAACAGTGAAATTGTCCATC
AGGTTCAAGTTTCAGACATTTCTTCATACGATGTGAACCTAGCCTTAGAT
GACAAATGCGAGACCGTGAAAGTAGCAACTATTATCAGACCTGGCGATGT
AAATGTGCCCTTAAAAGACAGAGAAAATGGTATAAACACAACTGTTAGAG
TCCAAAAGGGCCTTGTTGCTGATGACATAAACAACAACGATTTACGAAAT
GATTCATGCAACACTGATTTGGTTACAAAGGATATGACCATTTCTGAATT
ATTACATGATGACAAATCTAACAATTTCTATGATAAAAAACCTTCACCTC
GTACGATAGTCATAGAGGAAATCCACTGCGATGTCGAGACTATATATGAA
GTCAATTCGGCACCTTCAATAGACTTTGGAATGTTGGATACACTGGATCA
ATTCGAGGAAATAGTTAAAACTGAAACGACAATTATTGAAATTAGCTATT
CTACGACGACTACAACAACAACGGCAACATCGGAATTTGTCGGAGAACTT
ATTGAAAATATACCGAATTCGGAATTTGAAAGCTGGACAATTACTGTCGA
CAAAAGTATGGATAATAACCAGAAAATGGTCAATCCTTTGACCGACTTTT
CGATTCAATCGATTCAGAAAGATACTAAAAATTTAGATCTACgtccaaag
aaaattattatcgATGAAGAAATTCTCGTAGAACGTAACGCAAACAATGA
CATGCTTTCACCAAAACATTTTGATAATGATATTCAAACAGTATTAGATC
TGGAATGCGATATCTCTCAAGTATGCGATAACTCAGGCATGGGTGTATTT
GAAACAGCAGAAGTAAATAACACTCATATTATGGAAAGAGGATTAATACA
AGATGTTGTTGAGCCATTGAAGGAGAATTTACTTTATAATCCTTCATCGC
TTAATACAGACAGAAAGGATTTAAAACAAGCTGTAAAGCAGCATGCATCA
ATTGAGGAACTACAAGGATTTATGAATTCAAATAATTCAAATGACTCTAT
CTCGACTACTTTGTATTGGCATGAGAGTTCTCAATCTCTCGATAATTCTG
TCGTAGAAGACTCGTCGTCTCCAGGaaaaaaaaTCGAGGGTGCGTTCACT
CTTGATAAATCGACACGCGACTTGGAGCCAACCGACCAATCAACATCTGA
CTTTGTACCGGCCGACCAATCCACAACTGACTTAGAACCGAACTCACCAC
AAACTCTTCAATCCGAAAGCTTAGAGACTCACGGAAATCCAACTATTTCT
ACGTTTTCGCAAGAGACGGCAGAGATTCAATCATCTGCATCATTAACCCC
AATGACGCAATCATTCAACTGTAATTACCATAGCTCCAAACAGATTAATG
ACCAATTAACGCAAAAAGCCGGTAATGAGCTAATTACGGAAATGCGGAAT
ACATGTATTACGGAAATACCGGAAATTGACAATGATGGTAAGATTAGCTT
TACCGATGTTGCCAAAAGTGTGTCGGAAATGGAAGAAGAAAAACTACGTT
ACAGTGAAGCTAATATTGATAATTCCATTTCAGAAGATATTGTAGAGACA
GTAGTTGTTGATCAACAGAGCCTTGTTACTTGTTCACCTGACTTTGGAGC
CTCCATTGGAAAGGAGCTGTCACTGGATCCAAGTGTTGATGTTAACGATT
TGATTATTTCGCAAGATTCAACTAAAACTGATGAGGACTTAACAAGTCAT
TCCAACGTGTCAACGACTCTCAAAGTTAAAGACAAAAATCGTGAAAACGT
GATTGTTGGCTCTGACGTCATCAACGGTTTTAATAATAATGATGAATTGC
TAGAATCTGAGGATATTTCCAGACGAACTGTTGAACCACATTACCAAAAC
AGTGTTAGTGATATTGCTGGAAAAGATACACGGTcaaaggaaaatcttga
ttcaCAAACCAACGTAGACAACTCTGGTGGTAGTCTTGACCTCGTTTCGT
TTGATACTTCTAAAACAGAGTCAAAAAGCCAAGAATTGACAGGTACTGAT
TCAGAAATTCAAGAGTTGGATCCTTGTTCGCAGTTCGAGATTGTTCACAA
AGTGATGCCTCAAccaccatcatcatcatcatccatgAACTCTGATGAAT
ATGATTTCTATCTACCCTTCAACATCATGCCAACTATTTGTGAAGAGGAG
ACGGTTACTTCTACCaatcaaatcaaagaaattgGAAGAGTGACCAATCA
GAGCCACGGAAATAACATGTCAACCAATCAGGAGAAGGATAGCCTGAAAT
CAGCCAATTGTATTGAAGAGGAAGCC Coding sequence (CDS) from alignment at sc0000163_pilon:142395..144920+ >XLOC_040886 ID=XLOC_040886|Name=XLOC_040886|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5052bp|location=Sequence derived from alignment at sc0000163_pilon:142395..144920+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGACATTCCTACTGGTGGACCCTGATAAACTCTCGCAACCGTACAC
CGAAATCATCAAATATGCTACCATTGTCGGCCGAGAGGATCCTGAAGGAA
CCCGAGCTCGTTATTTCGATCCTGTTCAAATAATTTCACTCGAAGAAGAC
GGATGCTCTAACACTGATCAGTCACCAGACAGTATGTATAGAGCTTTACA
TAATGAGAATGTAAATGTGAACAATACCTTAAACAGTGAAATTGTCCATC
AGGTTCAAGTTTCAGACATTTCTTCATACGATGTGAACCTAGCCTTAGAT
GACAAATGCGAGACCGTGAAAGTAGCAACTATTATCAGACCTGGCGATGT
AAATGTGCCCTTAAAAGACAGAGAAAATGGTATAAACACAACTGTTAGAG
TCCAAAAGGGCCTTGTTGCTGATGACATAAACAACAACGATTTACGAAAT
GATTCATGCAACACTGATTTGGTTACAAAGGATATGACCATTTCTGAATT
ATTACATGATGACAAATCTAACAATTTCTATGATAAAAAACCTTCACCTC
GTACGATAGTCATAGAGGAAATCCACTGCGATGTCGAGACTATATATGAA
GTCAATTCGGCACCTTCAATAGACTTTGGAATGTTGGATACACTGGATCA
ATTCGAGGAAATAGTTAAAACTGAAACGACAATTATTGAAATTAGCTATT
CTACGACGACTACAACAACAACGGCAACATCGGAATTTGTCGGAGAACTT
ATTGAAAATATACCGAATTCGGAATTTGAAAGCTGGACAATTACTGTCGA
CAAAAGTATGGATAATAACCAGAAAATGGTCAATCCTTTGACCGACTTTT
CGATTCAATCGATTCAGAAAGATACTAAAAATTTAGATCTACgtccaaag
aaaattattatcgATGAAGAAATTCTCGTAGAACGTAACGCAAACAATGA
CATGCTTTCACCAAAACATTTTGATAATGATATTCAAACAGTATTAGATC
TGGAATGCGATATCTCTCAAGTATGCGATAACTCAGGCATGGGTGTATTT
GAAACAGCAGAAGTAAATAACACTCATATTATGGAAAGAGGATTAATACA
AGATGTTGTTGAGCCATTGAAGGAGAATTTACTTTATAATCCTTCATCGC
TTAATACAGACAGAAAGGATTTAAAACAAGCTGTAAAGCAGCATGCATCA
ATTGAGGAACTACAAGGATTTATGAATTCAAATAATTCAAATGACTCTAT
CTCGACTACTTTGTATTGGCATGAGAGTTCTCAATCTCTCGATAATTCTG
TCGTAGAAGACTCGTCGTCTCCAGGaaaaaaaaTCGAGGGTGCGTTCACT
CTTGATAAATCGACACGCGACTTGGAGCCAACCGACCAATCAACATCTGA
CTTTGTACCGGCCGACCAATCCACAACTGACTTAGAACCGAACTCACCAC
AAACTCTTCAATCCGAAAGCTTAGAGACTCACGGAAATCCAACTATTTCT
ACGTTTTCGCAAGAGACGGCAGAGATTCAATCATCTGCATCATTAACCCC
AATGACGCAATCATTCAACTGTAATTACCATAGCTCCAAACAGATTAATG
ACCAATTAACGCAAAAAGCCGGTAATGAGCTAATTACGGAAATGCGGAAT
ACATGTATTACGGAAATACCGGAAATTGACAATGATGGTAAGATTAGCTT
TACCGATGTTGCCAAAAGTGTGTCGGAAATGGAAGAAGAAAAACTACGTT
ACAGTGAAGCTAATATTGATAATTCCATTTCAGAAGATATTGTAGAGACA
GTAGTTGTTGATCAACAGAGCCTTGTTACTTGTTCACCTGACTTTGGAGC
CTCCATTGGAAAGGAGCTGTCACTGGATCCAAGTGTTGATGTTAACGATT
TGATTATTTCGCAAGATTCAACTAAAACTGATGAGGACTTAACAAGTCAT
TCCAACGTGTCAACGACTCTCAAAGTTAAAGACAAAAATCGTGAAAACGT
GATTGTTGGCTCTGACGTCATCAACGGTTTTAATAATAATGATGAATTGC
TAGAATCTGAGGATATTTCCAGACGAACTGTTGAACCACATTACCAAAAC
AGTGTTAGTGATATTGCTGGAAAAGATACACGGTcaaaggaaaatcttga
ttcaCAAACCAACGTAGACAACTCTGGTGGTAGTCTTGACCTCGTTTCGT
TTGATACTTCTAAAACAGAGTCAAAAAGCCAAGAATTGACAGGTACTGAT
TCAGAAATTCAAGAGTTGGATCCTTGTTCGCAGTTCGAGATTGTTCACAA
AGTGATGCCTCAAccaccatcatcatcatcatccatgAACTCTGATGAAT
ATGATTTCTATCTACCCTTCAACATCATGCCAACTATTTGTGAAGAGGAG
ACGGTTACTTCTACCaatcaaatcaaagaaattgGAAGAGTGACCAATCA
GAGCCACGGAAATAACATGTCAACCAATCAGGAGAAGGATAGCCTGAAAT
CAGCCAATTGTATTGAAGAGGAAGCCATGGAGACATTCCTACTGGTGGAC
CCTGATAAACTCTCGCAACCGTACACCGAAATCATCAAATATGCTACCAT
TGTCGGCCGAGAGGATCCTGAAGGAACCCGAGCTCGTTATTTCGATCCTG
TTCAAATAATTTCACTCGAAGAAGACGGATGCTCTAACACTGATCAGTCA
CCAGACAGTATGTATAGAGCTTTACATAATGAGAATGTAAATGTGAACAA
TACCTTAAACAGTGAAATTGTCCATCAGGTTCAAGTTTCAGACATTTCTT
CATACGATGTGAACCTAGCCTTAGATGACAAATGCGAGACCGTGAAAGTA
GCAACTATTATCAGACCTGGCGATGTAAATGTGCCCTTAAAAGACAGAGA
AAATGGTATAAACACAACTGTTAGAGTCCAAAAGGGCCTTGTTGCTGATG
ACATAAACAACAACGATTTACGAAATGATTCATGCAACACTGATTTGGTT
ACAAAGGATATGACCATTTCTGAATTATTACATGATGACAAATCTAACAA
TTTCTATGATAAAAAACCTTCACCTCGTACGATAGTCATAGAGGAAATCC
ACTGCGATGTCGAGACTATATATGAAGTCAATTCGGCACCTTCAATAGAC
TTTGGAATGTTGGATACACTGGATCAATTCGAGGAAATAGTTAAAACTGA
AACGACAATTATTGAAATTAGCTATTCTACGACGACTACAACAACAACGG
CAACATCGGAATTTGTCGGAGAACTTATTGAAAATATACCGAATTCGGAA
TTTGAAAGCTGGACAATTACTGTCGACAAAAGTATGGATAATAACCAGAA
AATGGTCAATCCTTTGACCGACTTTTCGATTCAATCGATTCAGAAAGATA
CTAAAAATTTAGATCTACgtccaaagaaaattattatcgATGAAGAAATT
CTCGTAGAACGTAACGCAAACAATGACATGCTTTCACCAAAACATTTTGA
TAATGATATTCAAACAGTATTAGATCTGGAATGCGATATCTCTCAAGTAT
GCGATAACTCAGGCATGGGTGTATTTGAAACAGCAGAAGTAAATAACACT
CATATTATGGAAAGAGGATTAATACAAGATGTTGTTGAGCCATTGAAGGA
GAATTTACTTTATAATCCTTCATCGCTTAATACAGACAGAAAGGATTTAA
AACAAGCTGTAAAGCAGCATGCATCAATTGAGGAACTACAAGGATTTATG
AATTCAAATAATTCAAATGACTCTATCTCGACTACTTTGTATTGGCATGA
GAGTTCTCAATCTCTCGATAATTCTGTCGTAGAAGACTCGTCGTCTCCAG
GaaaaaaaaTCGAGGGTGCGTTCACTCTTGATAAATCGACACGCGACTTG
GAGCCAACCGACCAATCAACATCTGACTTTGTACCGGCCGACCAATCCAC
AACTGACTTAGAACCGAACTCACCACAAACTCTTCAATCCGAAAGCTTAG
AGACTCACGGAAATCCAACTATTTCTACGTTTTCGCAAGAGACGGCAGAG
ATTCAATCATCTGCATCATTAACCCCAATGACGCAATCATTCAACTGTAA
TTACCATAGCTCCAAACAGATTAATGACCAATTAACGCAAAAAGCCGGTA
ATGAGCTAATTACGGAAATGCGGAATACATGTATTACGGAAATACCGGAA
ATTGACAATGATGGTAAGATTAGCTTTACCGATGTTGCCAAAAGTGTGTC
GGAAATGGAAGAAGAAAAACTACGTTACAGTGAAGCTAATATTGATAATT
CCATTTCAGAAGATATTGTAGAGACAGTAGTTGTTGATCAACAGAGCCTT
GTTACTTGTTCACCTGACTTTGGAGCCTCCATTGGAAAGGAGCTGTCACT
GGATCCAAGTGTTGATGTTAACGATTTGATTATTTCGCAAGATTCAACTA
AAACTGATGAGGACTTAACAAGTCATTCCAACGTGTCAACGACTCTCAAA
GTTAAAGACAAAAATCGTGAAAACGTGATTGTTGGCTCTGACGTCATCAA
CGGTTTTAATAATAATGATGAATTGCTAGAATCTGAGGATATTTCCAGAC
GAACTGTTGAACCACATTACCAAAACAGTGTTAGTGATATTGCTGGAAAA
GATACACGGTcaaaggaaaatcttgattcaCAAACCAACGTAGACAACTC
TGGTGGTAGTCTTGACCTCGTTTCGTTTGATACTTCTAAAACAGAGTCAA
AAAGCCAAGAATTGACAGGTACTGATTCAGAAATTCAAGAGTTGGATCCT
TGTTCGCAGTTCGAGATTGTTCACAAAGTGATGCCTCAAccaccatcatc
atcatcatccatgAACTCTGATGAATATGATTTCTATCTACCCTTCAACA
TCATGCCAACTATTTGTGAAGAGGAGACGGTTACTTCTACCaatcaaatc
aaagaaattgGAAGAGTGACCAATCAGAGCCACGGAAATAACATGTCAAC
CAATCAGGAGAAGGATAGCCTGAAATCAGCCAATTGTATTGAAGAGGAAG
CC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000163_pilon | genome | sc0000163_pilon:142395..144920 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-2526:1 |
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