XLOC_024011 (gene) - C. hemisphaerica

Overview
NameXLOC_024011
Unique NameXLOC_024011
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0002174:15235..21056+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_024011 ID=XLOC_024011|Name=XLOC_024011|organism=Clytia hemisphaerica|type=gene|length=5822bp|location=Sequence derived from alignment at sc0002174:15235..21056+ (Clytia hemisphaerica)
TGTATAATAGATCCATTTGGTGAGAGTTCTGCTCTATTGACAGAAACCAA GCAAGCTTGGGAGTAAGTTCAAATACTGTATATTTTCCTTTAAACCAAGA TACAGTACTTTATTGTGATTTTTACATTTCCATTTGGATTTTATATCCAA AACGATTTATATTGACTGATGTATGATTTGTTAGTCCCGAAGAAAATGAT TTCACCCGTTCATAATACTTTTGCACGAGCTACATCTTAAGGAATGTTAC TATCCTTTCAATCCTAAAGTTTCCAGAAATTTCTACTAAGAAATATCATT ATTTCTTCGCTTAAACCTATTTTAATCCTTTTTCACgtgtttttgatttt atttttctcttctccaTTTGCCCcttttatttagaaaaaataaaattatt ttactcTAGAGCATTTATGACAAGAAACTTTGATGCGAACCAAACTTGGA AAATTGTTTGTAAAAAACATGCCTTGCAGAAAGACATCATATCATGCGGA GTGTTTTGCCTGAAGGTGAGTTAGCCTTTATtttaaaatctgtaaaatct aaatACCAATGGAATGAGCATGAAATTCCTATTAAAATTTAGTTACAAGA CGTGcctttattatttttctatcaaaagttatgacgaatGAAGGTTTTCT GATGATGTCATCACAAGCCCTTCCAGGCAAAACTAAAAAATAATCCTAGG ATGCACGATACTAAACTCGAATCTGTAAATTATATGTATAAGGGCCCGTA TATAAAGGGCTCGCATATCAAGCTGACGATTTCTTTTAAGGTTCGTTCTA TAGTAAATTTATTCCAAAAAAGCTAAAAGGTGACATGTTTAATTCCCAAA GATCATGACAGCAGAATAACTTGATAAGAAGATTGTAAATATACGAGTTT AAAATACTTTATAATACTTTTAGCAATTTCTTTACATTAAGATTATTCGT CAAGATTTAATAGACAAACAATTTTACGGAGTTTTCCATACCTTTTGTCA TGGTGTCAATATCTCGTTTCTATATTTCATTAGTTTGCCGAGGCCATGtt aaaagaaaaagatctaccAACAAAACTTCCCCCAAAAGAGCTCCGTGATT ACCGTCGTAAAATTGCCATTACGTTGATAGAAATTGGAGGTATGACTATT TATTATCATCTTTCTAATTTTACTATATTTTAGTCTAAGACAAAGTCACT AACTCAAGATCATTCCAAGCTGGAATCAAACTTCGGGCGGCTTTTTGGAG GAAATTTTTAGTCACCCGATAGATTCAGAAAGTCTTTATATCACTCAGCC TTATAGCCAACTATTTCTCCGTAAACTATAAATTACGTTTTTTATACAAA TATGATATAACATGATAAACgttgtttcaaaaatattggCAGTCTGCACA TATCGGTTAGTTGCTCTCAAAGGAAAGAAAGATACAATTAAAAGTAACaa ctcgttgaaaagataattggtaacttggccaaaatatttttctgacgCTT TGAACNCATATCAAGCTGACGATTTCTTTTAAGGTTCGTTCTATAGTAAA TTTATTCCAAAAAAGCTAAAAAGCGACATGTTTAATTCCCAAAGATCGCG ACAGCAGAATAACTTGATAAGAAGATTGTAAATATACGAGTTTAAAATAC TTTATAATACTTTGAGCAATTTCTTTACATTAAGATTATTCGTCAAGATT TAATAGACAAACAATTTTACGGAGTTTTCCATACCTTTTGTCATGGTGTC AATATCTTGTTTCTATATTTAATTAGTTTGCCGAGGCCATGTTAAAAGAA GAAGATTTACCAACAAAACTTCCCCCAAAAGAGCTCCGTGATTACCGTCG TAAAATTGCCATTACGTTGATAGAAATTGGAGGTATGACTATTTATTATC ATCTTTCTAATTTTACTATCTTTTAGTCTAAGACAAAGTCACTAACTCAA GATCATTCCAAGCTGGAATCAAACTTCGGGTGGCTTTTTGGAGGAAATTT TTAGTCACCCGATAGATTCAGAAAGTCTTTATATCACTCAGCCTTATAGC CAACTACTTCTCCGTAAACTATAAATTACGTTTTTTATACAAATATGATA TAACATGATAAACgttgtttcaaaaatattggCAGTCCGCACATATCGGT TAGTTGCTCTCAAAGGAAAGAAAGATACAATTAAAAGTAACaactcgttg aaaagataattggTAACTTGGCCAACATATTTTTCTGACGCTTTGAACTT CGCTGATTTAGAATATGTATTCAgatttttcatatctttcttCGATCAAA AGAAACGTTCGTACAGGCCTCCGAAGTTGGTCCATTTTGCCTCTGTTGGC CCGTTTTTGACCATTCTAAGCCTACTTTGGAGGCctgaactttttttttg aagaaagatatgaaaaatTGGTAGACATACCCAGAGAAGTCCaaagtttc agaaaaatataaattaagaTATTTTGGCTACTaacaaaaatcttcatttt ttattttcgaattCAATGAAACCTTTTAAAGCTTTAAACtcagaattatc ttttcaacgaggtattacttttgattatatattttttccttCAAGAGAAG TNACCTTTTAAAGCTTTAAACtcagaattatcttttcaacgaggtattac ttttgattatatatttttttccttcaagagAAAGTAAGCAAAATGTGTGG GTTGccaattcttttgaaatataCTACTCGATGCCAATAATCATCGTCTA CTATTAAATCCAATTAAAGTTTGTCAATCCTTTTTTATCAATAACAGTTG AATTTTCGTACCAGAGAATTTTGGGATTGAGGCAGTCTTCGAATGTCTAT CAGAACTTGTACAACTCGATATATTTATGTATTGCTATAGGTAACGACGA CTGGTGTGGTGAAGTTTGCCGCTTATGTGACAGGACGTCTCCCCCACCGT CGAAACGATTTGGATCAAATCCGAAAGAATGGGGATGGGTAATTATGTGA TTGATATTTTATAACCTTGAACCGATTCACTACTACTTTGGTCAATAAAC TTTTGAGTTCCTAAAAAGTAATGCACAGAAGAAACCAAGTGAACAATAAG TTTAGTCTACGTCAGCTCTCTGAAAGAGCGAGGCCCTTCTGTAATGACac tttaagttttgaaatcatcatttttgacATAAACTTAAtataaacttaaa aataaatttcataattGTTTTTTGTGGGATTTTGCCCAAAGATTAAAATT TGAcataaaatgacttttttgagatttaaccagttttttgtttttctttt ttcatcaaatttataagaaaattagcAACTAGTGGACCAAAAGCATATCA TTTAGTGAATTAACTGGAAGTTTTACCACTGAACAATTTCCATTAATCCA GTCACTGGCACTGACTTCTTTAATCACCCTCACCTAACCTCTGGGTATTT AAAGCGGTTAACggtttcaagtttttttaagaTAGACTTATGTATGTTTA TTACCTATCattaaaaatcaccaaaaatccTCAAAGTCTATTCCCGTGTC CATGTCAAAAATAGAATTTACCGCATTCTGGGATCCACAGCCTGCAAAGT GATAATCGATTCTTCCCTATAGTGTAAAAAAAACGACCTCTATTCAGGGN CCGTGTccatgtcaaaaataaaatttaccgCATTCTGGGATCCACAGCCT GCAAAGTGATAATCGATTCTTCCCTATAGTGTAAACAAAACGACCTCTAT TCAGGTTATTCTGTTATTTTTCATTAGTTATCTATTTTTCATCATCATAa ttctatttttgaattttccagGTTTGTTGTGACTTCTGCAAACCAGTCAA GTGGTATCACGGTGTTTGTTTGGGCATACGCGGTAGGACAGAATACCTCA GTGAAATAAGCTATTTTTGCGGAAAGGTAAGTTTTTGCAATAtcttattt tagtttaatgtaatGGCCGAGTATAGAATAATTATACCTGTTGCTACTAC GCTTAGCGTATGAAATTTGACCAGCCACCGTGGTAGTTAATTAGGTCGGT TCGATACTTTGCTCTtaagaaatgacaaaaaataataatacgaCAGAAGA CTATATCCTTTTGATTTCCTGTAGTTTTAAAAGCAATTTTCACTCACCCG ATGAAAGATATAGCTTTTTCAGAATGCGGAATGCGGGtcaaggaaaaaag ctctcatgtgGTCAGCCGGATAAAactctttttgctttttttgataactt ataAGATCATTGATGTACAAACAGTacgaagtaagccctgaatactaatg tatcaactattAACGAAGTCTGTGGCCGGGTCAGCAAAGaatggagagat tctttgatcttggGAGGTAATCACcgtgaagaaatttcacaaaaataatt attcaatataaagctatgatacaaagttaataagtgattgaccccaaaaa aacagcagaaaacagcgtttttagacgtcaatcagcttataactttggtt gatatcttttgactgaataattatttttgagaaatttttcacagagtgac gttcgatgatcaaggattcacttcagtgaaaatgatagttatagcacttt tctacaagattttcatttttttcttcttcattttcaacttcatttttaga atttctttaaaacattttttatttcaaattgttccactcactaatatctc ttttcaatgataccaaatttataaagattgaagaattcctttaaaagtta taggtaaaagaaaaaagagtgcacacttatcgtgaatagactttataatg attgatttttttcttctctcatTCAGAAACTTGTTCAGGATGAAATCTTC ACTCTAAAATTAGGTGAAACTTTGATTCGCCAACGGACAAATAGGACGGT CCGGAAGTGTTTCACATGCAAAGGCTCCTTGAGAGACGAACCACTTAAGC CTCCTCACGATATGGTCTTGGTTCAGCTCAAAGAGCGACCAATGGCAGGT GGCTCTTGGGCTGACAAAGATTCGTTGATATCGACATCAGTCCACTTCCA TGCCAAGCCACGATGTGTTGGAAAGCTAGATCCCAAGAAAGTCAAGCTCT CAAGAGAATTCAACGATCTTGATGATTCGCATCAGGAGCAACTGCGACTT CTTGGTATCGATATGAATACTTTAGACTGATATTGTCTTGTTTTTTAGTT ACATAGTTTTTTAGTGGTTTTTAACAAGTGTCTAAACTTAGActtaaact ttctttttatGACGCTGTATTATATATTTGTATTGTATACCCACtatcat ttgaatatattttttattttacaaaaactcAATTATCATTGTATTTGAta gttgaaagaaaaaatttgtatttgAAAGTCACTAACGATTATTCAGATAA TAGTGAACTGTCccgggtgtccggaaaaaaataatgagtcgaGTCACTTA TATAGgtagaaagttcttgtgtgtgtttcactaactATACAATGGTTTCA CTAACTATACAATGTTTAGAGTAGTCAATGTTTATCTCGCTTTTCTATGT CATTAATTGTCACGAAACATCTTTTACGAATGTCTTTTGCAGAAAACAGT TCTGAATAAATATAACATCattcagtagcgtggtgggttgACTAAAATTC GAGCTTTCCGTGGAGGCAATTTCAGAAGATTtagattttggcgcccccta tgaaaagtaaatatctttttaaagtgtttcaatgttcaaactcgataatT TTTTTCCGACACCCTGTGTTATATCTTTGTTTTTAGTTACATAGTTTTTT AGTGGTTTTTAACAAGTGTATA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00039708TCONS_00039708Clytia hemisphaericatranscript
TCONS_00039709TCONS_00039709Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00039709-proteinTCONS_00039709-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002174supercontigsc0002174:15235..21056 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.05 0.11 0.06 0 0.07 0 0.13 0.25 0.18 0.22 0.32 0.46 0.45 0.18 0.4 0.17 0.12 0.16 0 0 0 0.08 0.07 0.11 0.9 0.55 0.22 0 0 0.06