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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000308_pilon:182394..185027+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_007581 ID=XLOC_007581|Name=XLOC_007581|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2634bp|location=Sequence derived from alignment at sc0000308_pilon:182394..185027+ (Clytia hemisphaerica_ch_hm2_pilon)
GAGAAAAGATCAATTCTTGAAGACTTGCAATCTGAACTCTTAAACGAAAA
GCCATCTGACATGACCACACAACATTACCAAGATCTTTGCCAAGAAGTCG
ACCAAACCATTACAGAGTTGAATGAGGATTCGAAGAATTTGAAGGTCGTT
CATGAGAGATTGAGTGAGATTGAACAAGCCAAAGATGAGATTTCCACATG
GTGCATTGATGTGATGAATGAAGAAGACCAATGTGGTGTTGATTTGAAGG
TAAGTGACCCTAGCTTAAAGGAAAAACATTTGGCTACATAGAGCATAATT
GTTAGTTAAACCTTAAGCCGGAACTCACCAAAGTTCCTTTTGCTTAATGT
TTTCATAGTGTTGCAACTTTTCCATCTGTAGATGGAAATCGGCCTAGTTG
AGATTCTTTACTAGGATTTTCGTCCTAGTTtatgaagaatttcttcttaa
aatctattaaaaccCAAACGTTTTAAGAGCATTCGAAGCCTCAATCACtt
tctgatgttcttataacaaaacgtATTATATTTTGCTTCCAGAGTGAATT
GGAAAAGAAACTTTCTCTTCTTTCCACGTGCAACGACTGTGCATCGGAAC
TCATGAAGTCGTACGGTCTTCTCAACCAATCACTGATCGTTAAACCGCTG
ACCGAAATCAAAGAAGACATTTGCCAAGTAATGGAGATTGTAGAAGATCC
TATGTGTAGTTCTCAGGTTTTGGATGATACAGAAGAATTGTTGGATAGTT
TTGCAGCTCAATATTCACAAACTGACTCTCAACAAGAATCACCAAGTATC
GATTCCACTCTTGATAAAGAGGTAAAATCCAGTTAAATTCCTAAAAGTAG
TGTATCATCGGTGAATAAATTGATAATTCTCTACAAGCAAGGATTAGAAC
TTTTAATTGTCACTGGTTTAGAAATGAAGTCTAATATTAAAATCCAtgca
gggggtggacgaactaaaatcagtttttactttttactttaccccTcccc
cccTggaaaaaTAATTCTTCTTCGAATCatcctctggaaatgttcgttca
CCCCTTGTATGGAgataaaatggaatagcccattagcTAGCGATgtttta
ttaaaagtttttcttttgacttgaCTGGCTTCTCTTCACAGAGGATGATT
GATACAGTAAACGAGTCTATCAGCTTTTATCTACCGTGAAGTACTAGCCC
ACTCAAACCTCATCTTCTTCTAGATTATTTTAACTTTATCTCCGGAGGGg
aaacttaggcaaaaataggcgATGGGTGTGTGCGGACAGTAAGGGTCGGT
TTAATTAACCTTCCCAAGTCTCGTTAAGAAACTACGAAAACAACAAAAGG
TCGGAATAATATCTTCAAGGCTAGGAAATTAAGAGTCACTTTTTCGCCAA
TTTTTTCATTCTAAAAAGGGTAACCTTTTGGCTAAAATTAAGTCTCTTTA
AAGGTCGGCTTTAGGAGATCCGGTCCGAACAAGCCCGACATTCTCCAAGC
TTAGGACTTTAGCTAAATAAATTTTCGATGCAAGGTTAAAGAGAAGCATt
atctcaatttctttttcttcaggtaTCAGTGTCTGTTGCCAGTAGCCAAG
TCACAGAAAATGTGACAGATCCAAGTTACGTGGTTTCCTTGGAGAATTCA
CCTTATTTGTTAGATGAAGAGACACTGACATCAATGACCAATCCAACACA
ATCTGGCGATCTCCTCCAAGACGAAGATCGTTTTTATGCTGTAGGATCAG
CCGGTTCTTTAGAAGATGTTTGCAGTTTGGTCTCTGAGGACTTCGATGGA
AGGAGTGAATCGATGGATATTAATTATGTGGACGATTTAGATTCGGTTGC
TACTGATGATAATACTAGCAAACTCCCCACTCACCACTCCATTACTACTG
AAGACTTGGTGTCCTCGGCATCCAGTCTGCCGCCCTTAGAATCAACAGCA
GAAAGTGGAGTATCTGCATCAGTGGAGCAAGGTGATGAAAACAGCTCTGG
CAACACGTGTGATGAAGTTGACAATGCTTCGTTTATGGAGAGTACTTCAA
GTCAGAACGTAGAAGATTCTTTTAGAGATGAGCTCTCATTTGATCAAGAT
ACTGGTGCAACACATTCTGTTGTTGACAGCGATTCCTTTGTTGAAGAGAC
TTCTCAAAATACAAGTAGCATTGCAGAAGTATCAAACGATAATAAtgatg
tttcttataaaaaagaacattcAGCTAATTCCCTCTCTGAGCCGCTCTCT
GAAAAGGTGAGCAGTGATACATCTTGCTCAGATATTGAAAAGCAAAATTC
CTCACAACCACCTTTTGGATTAGCAACCAACTGGAAGAATCCTGCTACAC
AGTCTTGTTCTGTGTCAGAGGAATACCTTTCAGGAgccaatgaaaatgaa
gaagcgACTTCAAGGACCAATGACCATGAAGGATTAACACCACGTGACTT
CAATACACCAATCCCAACGATCCGTATCGAGAACACAGACGGGAACGATA
ATGAATCCACCATGTTGTCGATTGATGGTGAAAATGTCTTCGTGATTGGT
TTAGAGCAAGAATTAGATTCCGTGATGAAAGAAGAAGACAATGGAATGGA
GGGTTTGCAAACCAAACTGACCAAGATCCaggta Coding sequence (CDS) from alignment at sc0000308_pilon:182394..185027+ >XLOC_007581 ID=XLOC_007581|Name=XLOC_007581|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3180bp|location=Sequence derived from alignment at sc0000308_pilon:182394..185027+ (Clytia hemisphaerica_ch_hm2_pilon)
GAGAAAAGATCAATTCTTGAAGACTTGCAATCTGAACTCTTAAACGAAAA
GCCATCTGACATGACCACACAACATTACCAAGATCTTTGCCAAGAAGTCG
ACCAAACCATTACAGAGTTGAATGAGGATTCGAAGAATTTGAAGGTCGTT
CATGAGAGATTGAGTGAGATTGAACAAGCCAAAGATGAGATTTCCACATG
GTGCATTGATGTGATGAATGAAGAAGACCAATGTGGTGTTGATTTGAAGG
AGAAAAGATCAATTCTTGAAGACTTGCAATCTGAACTCTTAAACGAAAAG
CCATCTGACATGACCACACAACATTACCAAGATCTTTGCCAAGAAGTCGA
CCAAACCATTACAGAGTTGAATGAGGATTCGAAGAATTTGAAGGTCGTTC
ATGAGAGATTGAGTGAGATTGAACAAGCCAAAGATGAGATTTCCACATGG
TGCATTGATGTGATGAATGAAGAAGACCAATGTGGTGTTGATTTGAAGAG
TGAATTGGAAAAGAAACTTTCTCTTCTTTCCACGTGCAACGACTGTGCAT
CGGAACTCATGAAGTCGTACGGTCTTCTCAACCAATCACTGATCGTTAAA
CCGCTGACCGAAATCAAAGAAGACATTTGCCAAGTAATGGAGATTGTAGA
AGATCCTATGTGTAGTTCTCAGGTTTTGGATGATACAGAAGAATTGTTGG
ATAGTTTTGCAGCTCAATATTCACAAACTGACTCTCAACAAGAATCACCA
AGTATCGATTCCACTCTTGATAAAGAGAGTGAATTGGAAAAGAAACTTTC
TCTTCTTTCCACGTGCAACGACTGTGCATCGGAACTCATGAAGTCGTACG
GTCTTCTCAACCAATCACTGATCGTTAAACCGCTGACCGAAATCAAAGAA
GACATTTGCCAAGTAATGGAGATTGTAGAAGATCCTATGTGTAGTTCTCA
GGTTTTGGATGATACAGAAGAATTGTTGGATAGTTTTGCAGCTCAATATT
CACAAACTGACTCTCAACAAGAATCACCAAGTATCGATTCCACTCTTGAT
AAAGAGgtaTCAGTGTCTGTTGCCAGTAGCCAAGTCACAGAAAATGTGAC
AGATCCAAGTTACGTGGTTTCCTTGGAGAATTCACCTTATTTGTTAGATG
AAGAGACACTGACATCAATGACCAATCCAACACAATCTGGCGATCTCCTC
CAAGACGAAGATCGTTTTTATGCTGTAGGATCAGCCGGTTCTTTAGAAGA
TGTTTGCAGTTTGGTCTCTGAGGACTTCGATGGAAGGAGTGAATCGATGG
ATATTAATTATGTGGACGATTTAGATTCGGTTGCTACTGATGATAATACT
AGCAAACTCCCCACTCACCACTCCATTACTACTGAAGACTTGGTGTCCTC
GGCATCCAGTCTGCCGCCCTTAGAATCAACAGCAGAAAGTGGAGTATCTG
CATCAGTGGAGCAAGGTGATGAAAACAGCTCTGGCAACACGTGTGATGAA
GTTGACAATGCTTCGTTTATGGAGAGTACTTCAAGTCAGAACGTAGAAGA
TTCTTTTAGAGATGAGCTCTCATTTGATCAAGATACTGGTGCAACACATT
CTGTTGTTGACAGCGATTCCTTTGTTGAAGAGACTTCTCAAAATACAAGT
AGCATTGCAGAAGTATCAAACGATAATAAtgatgtttcttataaaaaaga
acattcAGCTAATTCCCTCTCTGAGCCGCTCTCTGAAAAGGTGAGCAGTG
ATACATCTTGCTCAGATATTGAAAAGCAAAATTCCTCACAACCACCTTTT
GGATTAGCAACCAACTGGAAGAATCCTGCTACACAGTCTTGTTCTGTGTC
AGAGGAATACCTTTCAGGAgccaatgaaaatgaagaagcgACTTCAAGGA
CCAATGACCATGAAGGATTAACACCACGTGACTTCAATACACCAATCCCA
ACGATCCGTATCGAGAACACAGACGGGAACGATAATGAATCCACCATGTT
GTCGATTGATGGTGAAAATGTCTTCGTGATTGGTTTAGAGCAAGAATTAG
ATTCCGTGATGAAAGAAGAAGACAATGGAATGGAGGGTTTGCAAACCAAA
CTGACCAAGATCCaggtagtaTCAGTGTCTGTTGCCAGTAGCCAAGTCAC
AGAAAATGTGACAGATCCAAGTTACGTGGTTTCCTTGGAGAATTCACCTT
ATTTGTTAGATGAAGAGACACTGACATCAATGACCAATCCAACACAATCT
GGCGATCTCCTCCAAGACGAAGATCGTTTTTATGCTGTAGGATCAGCCGG
TTCTTTAGAAGATGTTTGCAGTTTGGTCTCTGAGGACTTCGATGGAAGGA
GTGAATCGATGGATATTAATTATGTGGACGATTTAGATTCGGTTGCTACT
GATGATAATACTAGCAAACTCCCCACTCACCACTCCATTACTACTGAAGA
CTTGGTGTCCTCGGCATCCAGTCTGCCGCCCTTAGAATCAACAGCAGAAA
GTGGAGTATCTGCATCAGTGGAGCAAGGTGATGAAAACAGCTCTGGCAAC
ACGTGTGATGAAGTTGACAATGCTTCGTTTATGGAGAGTACTTCAAGTCA
GAACGTAGAAGATTCTTTTAGAGATGAGCTCTCATTTGATCAAGATACTG
GTGCAACACATTCTGTTGTTGACAGCGATTCCTTTGTTGAAGAGACTTCT
CAAAATACAAGTAGCATTGCAGAAGTATCAAACGATAATAAtgatgtttc
ttataaaaaagaacattcAGCTAATTCCCTCTCTGAGCCGCTCTCTGAAA
AGGTGAGCAGTGATACATCTTGCTCAGATATTGAAAAGCAAAATTCCTCA
CAACCACCTTTTGGATTAGCAACCAACTGGAAGAATCCTGCTACACAGTC
TTGTTCTGTGTCAGAGGAATACCTTTCAGGAgccaatgaaaatgaagaag
cgACTTCAAGGACCAATGACCATGAAGGATTAACACCACGTGACTTCAAT
ACACCAATCCCAACGATCCGTATCGAGAACACAGACGGGAACGATAATGA
ATCCACCATGTTGTCGATTGATGGTGAAAATGTCTTCGTGATTGGTTTAG
AGCAAGAATTAGATTCCGTGATGAAAGAAGAAGACAATGGAATGGAGGGT
TTGCAAACCAAACTGACCAAGATCCaggta
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000308_pilon | genome | sc0000308_pilon:182394..185027 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 529-1590:1573 |
| Aaloc | 250-528:543 |
| Aaloc | 1-249:1 |
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