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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000245_pilon:247064..253498- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041555 ID=XLOC_041555|Name=XLOC_041555|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6435bp|location=Sequence derived from alignment at sc0000245_pilon:247064..253498- (Clytia hemisphaerica_ch_hm2_pilon) ATGTCTACAATGGCAACATTTAAAGGCCCACAAGAGGTAAGAGCTACCTT
TATCATGCAAGATTATGATTTTATAAAGCTCAATTCATGATGGAAAACTC
ATCAGTTTAGTGCTGTGTGTGGGTAGCATTAGCTAGCATCATGCTAAATG
CTGCATTAGCATGTAGATTGTAGTTGCCCATTGTCACCCAAATGTCTAGA
ATGGAAACATTTAAAGGCCCACAAAAAGTGTGATCTACCTTTAACCTGCA
AAGTTATGATTTTATAGCTAGGGTGCGCACTCGTCGGGATTTTTTGCGCG
GAACGAGGAAGAATTTACAAAAATGAACTTCAATGCATTAGTACTTACCT
TTAAATCATCCAAATCTGTTCATTCTTTTTTTTAAATCAATCAGGAATTC
TCAGGGAAACAAGTAAAAAAAGCTGCATCCAGGTATCTATTTTCTTTCCA
AAGATATTCATGTTTTTCGACATCAAGGTGAAAACGCGATTTAGCGCTGA
CCACGGCACAGGAAAATTCCTTACCCACATTGAGACAAATGGCTGTCGCT
ATTGAGCTGGTTCATCTTTTCAATCCCGGTTTTTTTAGTAAACCCAGGGT
AAGATTAGGCTACAATCTATCACAAACTGCTTTATTTCAAAATCTACAGG
CCGTACCTGGAATTTCGAAAAATAAGAAGAAATTGCAATTTTTTAACAAG
ATTGCAGATTTTTTCATTTAAGCACCATACACCATCTGAAAGCTGAGGAT
TTCAGCTTTCTAGTGGTAAAATTTGTTTTTAGCTATCATTTCCAGCTCAT
TAGCGATAAGCTAAAGTTTAACAGTCATCGGGCCGATTTTCAGACCGCAC
CAGCAAAACTCCCCACACCCAGCCACACGGAAGACTAGATTTCATCCGCC
ATTTTTGGCGCGATTTTGGTGCTTCCGAAAATTTATTTCTTGCTGGCGTG
GTGTAAGGAGGCGATTCTTTGAAAAGGTGATTTTTTTGTGATCTGAAAAT
GGAATAACTTTAGGAACACTTAACCAATTCTAATAAATGATCCCTCATTT
TTCTCATAAAGGTAAGGACTTTCAAATAAAATTAGTTTGGTTTCTAAAAA
TTGAGGGGAAAATTTTGGCCTGTCCACCCTATTATAGCCCAATTCATGAT
GGAAACTCATCAGCAGAGTACTACCGCCATATCATACATAGTCAAATCAT
AAACATTGGGCCATTCCAGCAGAATTTGTCTGTAACAGGGGGGGCGAACG
ACACAGGATTTCCAAAGGCAAAGGTTTTCACCAAAATTCAAAATTTCCAA
GGTGAGAGAAGAAAATGTATAAATTTCCAAGGCAATTGAACTAAAAAAGA
CAAAATAGATATAGAGTGGAATTCCCGATGCATTTTGCAAAAGTACATAG
ATTTTCATCGGAATTTCCGACCACCACTGGAAAAGATAAATTATTTCCGA
GGCTAGAAAAAATTAATAAATGCACGTCGTCCGACGGGGGTATACAAATA
TTTTCTGGAATGGCTCATTGACTTTTGGTAATATTATGTTGTTTTAGCTA
GAGTACCCTGCCCAGTTGGCGACCGAAATTACGGGAAAGATGCACTGCAA
AACTTCTAAAGGGATTCATGAAAAAATAACCTGGCGCTTTTTAATGAAAA
TTAACATTCTCAAAAACTATGAGAAACTGCCTAAAATTTAAGACATACAG
TAGATGAAAAAATTTGAGCCAAGTCAACATTGAAAACTTATTTGAAGATC
AACTTCCCAAGAAAAAGATCTACGGGGGAGACGGAACCCACCTAGATCGG
CGCACTACCGAATAGGCTATTTCCCGGAAATTTTGCCGGACCTCAAACAC
TGACTCATTTACATGTGCGGAATCATTTTTACTTTAGCGTATATAGGGCC
TTAAAAATCGAAGCGCTGTCTTGGGAATTGAATGACAAATTTTGGTTGGT
TGATTTTGGCTGCTGCACGTTTTATTTTGTTTCAAACTTTCAAGTTTTAA
TTAATTGTCTTGCAAACTTGATTCTTGTACCGTAACTTGTTGCTGCAAAT
ACATCCTGTAGATGACTGATGTTGTTTTTTCTGAAAGCTTGATTTTCTAG
TGTAACTAACTGACTTAGCTGTGATAGATTATTTTGATGGAAGTTGTTGG
AATGTTTACAAAGCTCTTGACAGAAAATAGTTTGTTTTATTGTCAATGAT
GACAGTGCCGTTATTAATTTTGTTAGATCTGACATATTTCATGTTTGTAA
GTTGAAATTAACGCATAAATAATTAACACAAATTTGTTTTGCTTTTTCAA
GGACACCACGGCTAGTTTTGATAAGGGGTGTTTTTATTAACACAAAATTT
TTCAATAAAAAATGGCTAGTAATATTTGTGTAATAAGGTAATTCCCGAGG
TAAGCGCTTCGATTTGTCAGACCTTGATTTACGCACTACCGGGTGCACCA
AAAAAAAGTATACAACTTTGTCGAGATATTGTGAGCTTCAGGATTTATAT
TTTTTTGTTCATTCTTTTTTTATTGTATAGAGGATGCTCTAACTTGAATT
TTGAGCTATTATACATTAAATTTGAAAAAGTAGTTCGAAAGTTACTTTTT
TTTCCATGTCGAAATTTCAAAAAATCATTAAAAACAGCAATCACGCTATA
AATAAGACAAAATGACAAAAACACAATTTCATTGTCTTTTTGATTCTTTT
TTCTCCTATCTTATATTTTTGCCAACGGTTTGTCCATCTTATTTACACGT
CATGAATATTTTCAAAACCAGCAAACTCAATGCAGACCCAAGTTCTTTGA
GCAACTAGTTGAGGAATGGTGATTTTTTTTTAAATTTTCTCACGTAACAC
AGCACACCTCTCTTGGAGATTTCCAAAAAAAATTTTCAGCCTTACCAAAA
ATATTTATCCACATGGGAGTAGCTTGTCTTACCATATTCTTAAATTCCGT
AACAAGTTTTGATGGACACAGTTGCATTTTTTGGTATTTTTTTGTGTAAA
GAAGGTGAGTGCCAAGAGAAAAGTTTGCTCGCTGTTTTTAATGATTTTTT
GAAATTTCGACATTAAAAAAAAGTCAGTTTTTTTTAAATAATTATTGAAT
TACTTTTTCAAACCTAATGTATTATATCTCAAAATTCAAGTTAGAGCATC
CTCTATGTGATAAAAAAAGAATGAACAAAAAAATTAAATCCTGAAGCTCA
CAATATCTCGACAAAGTTGTATACTTTTTTTTGGTGCACCCGGTATATAT
ATGCTGGCTAAATCGATCTAGCCAGCCAGGGTGCAGTATGTAGTGCTGAC
GAGTCCTAATAAGGACGAAATGCATATGCTGCTCTGCCACCCACATATCC
TGAGTGAATATAGTTGGACAGAAATTCTTATTTCTTCACATATATATATA
CACATAATTCCACACATGTCAGTTATACTAGCGTCCTGCAAATCAAAGAA
TAATGCTGAGAAAGCCTATAATGTTTACTTGACTCTCTTTTTAATGAAAT
AACATTTTCATAAACTATGAGAAATTGCCCAAATTTTGAGCTGAAGAAGA
AAAAATTTTAACCAAGCTAACCTTGAAAACTTATTTGAAGAACAATTTCC
CAAGAAAAAGATCTAGGGGGGGGCCACCACCCCTCTCCTGTCTAACACTA
GAATAGCACAACCCACAGTATGGCCCAAATTTTTTCAGGCCACTTGAATT
TGAAAAGTCCTGAACTGGCCCAGGTATGTTCAGGCAAAAAAAGTTTTGAT
ATTTTTGGCCAGAACATTTTGGCATCATTTTCGGGTATGTTCGGGCCATA
CTGTGCCTCCTAGAATAGTAGATAATTTTTCAAGGGTCTTAATAAGGGTA
TTTTAAAAGTAATAACACTAGTAGGGGGTCATTATTGGGTAATCCAGACA
AAAGCTGAAAAAAAGCTTTTTTTCTTACAAGAGCTTTAAGGCGCTCAAAA
TATCAATTATGATTTGTTACTGATAAACAAAACGTCCAATCAATGTTTTC
TGTGTCGAGTTTGAGTATTTTACATCGCTTTGAGACCAGGTTTTTGTATA
GTTGTTTTGGGGAATGCAACGGTCTTTTGAATAACTAATTACTCCACAGC
ATTACCTAGAGCTGCCTAGAGACAAGATAATTTATCACATTTTTATTGGC
TGAGAGAGAGAAAGTAATGTATGTAGAGTAATGAGTTATTCAAAAGACAG
TCGCATTCACCAAAACATCTATTGACTGACAGTTAGTCACACTAGGAAAT
CAAGCTTTCAGAAAAAACAACATCAGTCATCTACAGGATGTATTTGCAAC
ATCAAGGATGAGAGTTACCTGAATCAAGTTCGCAAGACACATAATTAAAA
ACTTGAAAGTTTGAAACAAAATAAAACGTGCAGCAGCCAAAATAACCAAC
CAAAATTTGTCATTCAATTCCCAAGACAGCGCTTCGATTTTTATACGCTT
GTTTATATGCTAAAGTAAAAGCAATTCCGCACATGTAAATGGGTCAGTGT
TTGAGGTCCGGCAAAATTTCCAAGAAATAGCCTATCCGGTAGTGCGCGGA
TCTAGGTGGGTTCCGCCTCCCCCGTAGATCTTTTTCTTGGGAAGTTGATC
TTCAAATTAGTTCTCAAGGTTGGCTGATTTTCTCATCTATGGCTCAAATT
TTAAGCAATTTCTCATAATTTTTGAGAATGTTAATTTCATCAAAAAGTGC
CGGGTTATTTTTTCATGAATCCCTTTATAAGTTTTGCAGTGCATTTTTTT
GCTTGAAAGTCAGCTAAACGATATAGCGCTTTTGCAGCATTAATCTTTGA
TACGCATTTTGGCGGGACGCTAGTGTGACTAACTGACTGAATGGTATTAC
CATAAATTTGTCTGATGTCAACATCCCTCTTTCAAATCTGACACCCTTCT
TTAGAGATAGGAATACTAGGAAGATCTGAATCACTGATAGATAAAAGGTT
GATTCATCTCTGATTACCAAGCAAAGGAATGTAGTTTCCATCAGCAAATC
CAACTGACCTATTATTCCCAGCTATAAAGAAGGTTGTCAAAAATATGACG
GATGTCAATATTAGACCAACCAACAGTGACTGGAGAAAATCTATAAATTG
AGCGCCTTGTTGAAAAAAGTTCGGTTACTTTTGGTTGAAGTCATTGTTCA
TGCAAGAGGGTGTATAGGGAGGGATATGGCGAAGCTGTTGAGAGAAATGG
TAAAAAAGTTTGGAATCGTTTTGGAATTTCAAGAATTTTGGTGGAAAAAA
ATCTGGAAATGCGCTTAACCAAACAGAATTTCTTCAACGTTGAAGTTTTT
TTCTAAAACTGGAATATTTTCTTCTGATAATCCCTAGATTCTGGGAGAGT
TGTCAGCATTTTTTCGTGTGGCAAGGTGTGATAGGAAAAAATCAGGAAGG
TTTCAAAGTTTAAATGGTTCAAGAGCTGAAGCCAGGGGATCAGCAGTAGA
AGAATTTTAAATAAAAGGCCATTCCAGAATTTGTCAGTTTATGGTTAGGA
AAAGGGCAGGAAAATTATTCAGAAATGTGAAAATAAAGTTTATTTACTTT
CTTTTCTAGTTGCCAGAAGCAGAACGCTTCAAACAGAAGTTCCCACAAGG
AGCACCAAGGCAGTCTGATTTTCTAAGAAAACGCTTACAAGGCAAAGGAG
GGGTAAGAAATCTGCTGCTGCTTGAAAAATTGAAGTTAGATTCATCTATG
TTTTTAAGTTCAGGCGTATTTTCGTCGGTGATAAAAAAGGGAAAAAACAG
GCTTAAAAGGTTTTGTTTTTAAATAAGAGTGATATCGTTTGCTTACTCAT
CAATTTTAATTCACAAGCTTTTTCACATTGGATTGACACGGATGTGCAGC
AATATTGGTCAGAAAATGGAAAAGAAAAGCATTTTTTTTGCTTATATCAG
CACAATTTAACAATAGAAAGACACTGTCCTTATATGAAATATGTGTCTGA
TATGAAACAGGAATACTTATGTCAAAATGAAACCTTTAAAGATAATCATG
ATTGTAAAACTAGTTTGGAATCTAGTAAGAAAATTTGAGTCTGTGAGTCT
CACGCTCATAGTTGGCTCAAAACTAAGAATTACCTTTTCTCTACACATCT
CTAACTGATATATTTGGGAGGGAATCAAAATAAGGTATTTTATAGTCCTT
TTCGAAGAACTGGGTTTGTAATATTTATTGTGTTATCTTTTCCAGGCAAA
GTATTTTGATTCTGGGGATTACAACATGGCCAAGAGCACTCATGGTAGGA
ATGTTCCAACTGGGAAAGCCATTCCAACACCTGAAAATTTACCTCAAAGG
AAAATCTCCTCTACCAAACAGAGTAATCTGATAGAAGGCGGCACGAGTCC
CCCGCAGAGCGCTCTACCAGAGGAGAAAGCTGTGACTGAAGGTGAGCAGC
ATAAATCAAAACAACATATCACTGAACAAGAATAA Coding sequence (CDS) from alignment at sc0000245_pilon:247064..253498- >XLOC_041555 ID=XLOC_041555|Name=XLOC_041555|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=738bp|location=Sequence derived from alignment at sc0000245_pilon:247064..253498- (Clytia hemisphaerica_ch_hm2_pilon) ATGTCTACAATGGCAACATTTAAAGGCCCACAAGAGATGTCTACAATGGC AACATTTAAAGGCCCACAAGAGTTGCCAGAAGCAGAACGCTTCAAACAGA AGTTCCCACAAGGAGCACCAAGGCAGTCTGATTTTCTAAGAAAACGCTTA CAAGGCAAAGGAGGGTTGCCAGAAGCAGAACGCTTCAAACAGAAGTTCCC ACAAGGAGCACCAAGGCAGTCTGATTTTCTAAGAAAACGCTTACAAGGCA AAGGAGGGGCAAAGTATTTTGATTCTGGGGATTACAACATGGCCAAGAGC ACTCATGGTAGGAATGTTCCAACTGGGAAAGCCATTCCAACACCTGAAAA TTTACCTCAAAGGAAAATCTCCTCTACCAAACAGAGTAATCTGATAGAAG GCGGCACGAGTCCCCCGCAGAGCGCTCTACCAGAGGAGAAAGCTGTGACT GAAGGTGAGCAGCATAAATCAAAACAACATATCACTGAACAAGAATAAGC AAAGTATTTTGATTCTGGGGATTACAACATGGCCAAGAGCACTCATGGTA GGAATGTTCCAACTGGGAAAGCCATTCCAACACCTGAAAATTTACCTCAA AGGAAAATCTCCTCTACCAAACAGAGTAATCTGATAGAAGGCGGCACGAG TCCCCCGCAGAGCGCTCTACCAGAGGAGAAAGCTGTGACTGAAGGTGAGC AGCATAAATCAAAACAACATATCACTGAACAAGAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000245_pilon | genome | sc0000245_pilon:247064..253498 - |
Properties
| Property Name | Value |
| Aaloc | 130-369:241 |
| Aaloc | 37-129:877 |
| Aaloc | 1-36:6436 |
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