XLOC_041555 (mRNA) -

Overview
NameXLOC_041555
Unique NameXLOC_041555
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000245_pilon:247064..253498-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041555 ID=XLOC_041555|Name=XLOC_041555|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6435bp|location=Sequence derived from alignment at sc0000245_pilon:247064..253498- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTACAATGGCAACATTTAAAGGCCCACAAGAGGTAAGAGCTACCTT TATCATGCAAGATTATGATTTTATAAAGCTCAATTCATGATGGAAAACTC ATCAGTTTAGTGCTGTGTGTGGGTAGCATTAGCTAGCATCATGCTAAATG CTGCATTAGCATGTAGATTGTAGTTGCCCATTGTCACCCAAATGTCTAGA ATGGAAACATTTAAAGGCCCACAAAAAGTGTGATCTACCTTTAACCTGCA AAGTTATGATTTTATAGCTAGGGTGCGCACTCGTCGGGATTTTTTGCGCG GAACGAGGAAGAATTTACAAAAATGAACTTCAATGCATTAGTACTTACCT TTAAATCATCCAAATCTGTTCATTCTTTTTTTTAAATCAATCAGGAATTC TCAGGGAAACAAGTAAAAAAAGCTGCATCCAGGTATCTATTTTCTTTCCA AAGATATTCATGTTTTTCGACATCAAGGTGAAAACGCGATTTAGCGCTGA CCACGGCACAGGAAAATTCCTTACCCACATTGAGACAAATGGCTGTCGCT ATTGAGCTGGTTCATCTTTTCAATCCCGGTTTTTTTAGTAAACCCAGGGT AAGATTAGGCTACAATCTATCACAAACTGCTTTATTTCAAAATCTACAGG CCGTACCTGGAATTTCGAAAAATAAGAAGAAATTGCAATTTTTTAACAAG ATTGCAGATTTTTTCATTTAAGCACCATACACCATCTGAAAGCTGAGGAT TTCAGCTTTCTAGTGGTAAAATTTGTTTTTAGCTATCATTTCCAGCTCAT TAGCGATAAGCTAAAGTTTAACAGTCATCGGGCCGATTTTCAGACCGCAC CAGCAAAACTCCCCACACCCAGCCACACGGAAGACTAGATTTCATCCGCC ATTTTTGGCGCGATTTTGGTGCTTCCGAAAATTTATTTCTTGCTGGCGTG GTGTAAGGAGGCGATTCTTTGAAAAGGTGATTTTTTTGTGATCTGAAAAT GGAATAACTTTAGGAACACTTAACCAATTCTAATAAATGATCCCTCATTT TTCTCATAAAGGTAAGGACTTTCAAATAAAATTAGTTTGGTTTCTAAAAA TTGAGGGGAAAATTTTGGCCTGTCCACCCTATTATAGCCCAATTCATGAT GGAAACTCATCAGCAGAGTACTACCGCCATATCATACATAGTCAAATCAT AAACATTGGGCCATTCCAGCAGAATTTGTCTGTAACAGGGGGGGCGAACG ACACAGGATTTCCAAAGGCAAAGGTTTTCACCAAAATTCAAAATTTCCAA GGTGAGAGAAGAAAATGTATAAATTTCCAAGGCAATTGAACTAAAAAAGA CAAAATAGATATAGAGTGGAATTCCCGATGCATTTTGCAAAAGTACATAG ATTTTCATCGGAATTTCCGACCACCACTGGAAAAGATAAATTATTTCCGA GGCTAGAAAAAATTAATAAATGCACGTCGTCCGACGGGGGTATACAAATA TTTTCTGGAATGGCTCATTGACTTTTGGTAATATTATGTTGTTTTAGCTA GAGTACCCTGCCCAGTTGGCGACCGAAATTACGGGAAAGATGCACTGCAA AACTTCTAAAGGGATTCATGAAAAAATAACCTGGCGCTTTTTAATGAAAA TTAACATTCTCAAAAACTATGAGAAACTGCCTAAAATTTAAGACATACAG TAGATGAAAAAATTTGAGCCAAGTCAACATTGAAAACTTATTTGAAGATC AACTTCCCAAGAAAAAGATCTACGGGGGAGACGGAACCCACCTAGATCGG CGCACTACCGAATAGGCTATTTCCCGGAAATTTTGCCGGACCTCAAACAC TGACTCATTTACATGTGCGGAATCATTTTTACTTTAGCGTATATAGGGCC TTAAAAATCGAAGCGCTGTCTTGGGAATTGAATGACAAATTTTGGTTGGT TGATTTTGGCTGCTGCACGTTTTATTTTGTTTCAAACTTTCAAGTTTTAA TTAATTGTCTTGCAAACTTGATTCTTGTACCGTAACTTGTTGCTGCAAAT ACATCCTGTAGATGACTGATGTTGTTTTTTCTGAAAGCTTGATTTTCTAG TGTAACTAACTGACTTAGCTGTGATAGATTATTTTGATGGAAGTTGTTGG AATGTTTACAAAGCTCTTGACAGAAAATAGTTTGTTTTATTGTCAATGAT GACAGTGCCGTTATTAATTTTGTTAGATCTGACATATTTCATGTTTGTAA GTTGAAATTAACGCATAAATAATTAACACAAATTTGTTTTGCTTTTTCAA GGACACCACGGCTAGTTTTGATAAGGGGTGTTTTTATTAACACAAAATTT TTCAATAAAAAATGGCTAGTAATATTTGTGTAATAAGGTAATTCCCGAGG TAAGCGCTTCGATTTGTCAGACCTTGATTTACGCACTACCGGGTGCACCA AAAAAAAGTATACAACTTTGTCGAGATATTGTGAGCTTCAGGATTTATAT TTTTTTGTTCATTCTTTTTTTATTGTATAGAGGATGCTCTAACTTGAATT TTGAGCTATTATACATTAAATTTGAAAAAGTAGTTCGAAAGTTACTTTTT TTTCCATGTCGAAATTTCAAAAAATCATTAAAAACAGCAATCACGCTATA AATAAGACAAAATGACAAAAACACAATTTCATTGTCTTTTTGATTCTTTT TTCTCCTATCTTATATTTTTGCCAACGGTTTGTCCATCTTATTTACACGT CATGAATATTTTCAAAACCAGCAAACTCAATGCAGACCCAAGTTCTTTGA GCAACTAGTTGAGGAATGGTGATTTTTTTTTAAATTTTCTCACGTAACAC AGCACACCTCTCTTGGAGATTTCCAAAAAAAATTTTCAGCCTTACCAAAA ATATTTATCCACATGGGAGTAGCTTGTCTTACCATATTCTTAAATTCCGT AACAAGTTTTGATGGACACAGTTGCATTTTTTGGTATTTTTTTGTGTAAA GAAGGTGAGTGCCAAGAGAAAAGTTTGCTCGCTGTTTTTAATGATTTTTT GAAATTTCGACATTAAAAAAAAGTCAGTTTTTTTTAAATAATTATTGAAT TACTTTTTCAAACCTAATGTATTATATCTCAAAATTCAAGTTAGAGCATC CTCTATGTGATAAAAAAAGAATGAACAAAAAAATTAAATCCTGAAGCTCA CAATATCTCGACAAAGTTGTATACTTTTTTTTGGTGCACCCGGTATATAT ATGCTGGCTAAATCGATCTAGCCAGCCAGGGTGCAGTATGTAGTGCTGAC GAGTCCTAATAAGGACGAAATGCATATGCTGCTCTGCCACCCACATATCC TGAGTGAATATAGTTGGACAGAAATTCTTATTTCTTCACATATATATATA CACATAATTCCACACATGTCAGTTATACTAGCGTCCTGCAAATCAAAGAA TAATGCTGAGAAAGCCTATAATGTTTACTTGACTCTCTTTTTAATGAAAT AACATTTTCATAAACTATGAGAAATTGCCCAAATTTTGAGCTGAAGAAGA AAAAATTTTAACCAAGCTAACCTTGAAAACTTATTTGAAGAACAATTTCC CAAGAAAAAGATCTAGGGGGGGGCCACCACCCCTCTCCTGTCTAACACTA GAATAGCACAACCCACAGTATGGCCCAAATTTTTTCAGGCCACTTGAATT TGAAAAGTCCTGAACTGGCCCAGGTATGTTCAGGCAAAAAAAGTTTTGAT ATTTTTGGCCAGAACATTTTGGCATCATTTTCGGGTATGTTCGGGCCATA CTGTGCCTCCTAGAATAGTAGATAATTTTTCAAGGGTCTTAATAAGGGTA TTTTAAAAGTAATAACACTAGTAGGGGGTCATTATTGGGTAATCCAGACA AAAGCTGAAAAAAAGCTTTTTTTCTTACAAGAGCTTTAAGGCGCTCAAAA TATCAATTATGATTTGTTACTGATAAACAAAACGTCCAATCAATGTTTTC TGTGTCGAGTTTGAGTATTTTACATCGCTTTGAGACCAGGTTTTTGTATA GTTGTTTTGGGGAATGCAACGGTCTTTTGAATAACTAATTACTCCACAGC ATTACCTAGAGCTGCCTAGAGACAAGATAATTTATCACATTTTTATTGGC TGAGAGAGAGAAAGTAATGTATGTAGAGTAATGAGTTATTCAAAAGACAG TCGCATTCACCAAAACATCTATTGACTGACAGTTAGTCACACTAGGAAAT CAAGCTTTCAGAAAAAACAACATCAGTCATCTACAGGATGTATTTGCAAC ATCAAGGATGAGAGTTACCTGAATCAAGTTCGCAAGACACATAATTAAAA ACTTGAAAGTTTGAAACAAAATAAAACGTGCAGCAGCCAAAATAACCAAC CAAAATTTGTCATTCAATTCCCAAGACAGCGCTTCGATTTTTATACGCTT GTTTATATGCTAAAGTAAAAGCAATTCCGCACATGTAAATGGGTCAGTGT TTGAGGTCCGGCAAAATTTCCAAGAAATAGCCTATCCGGTAGTGCGCGGA TCTAGGTGGGTTCCGCCTCCCCCGTAGATCTTTTTCTTGGGAAGTTGATC TTCAAATTAGTTCTCAAGGTTGGCTGATTTTCTCATCTATGGCTCAAATT TTAAGCAATTTCTCATAATTTTTGAGAATGTTAATTTCATCAAAAAGTGC CGGGTTATTTTTTCATGAATCCCTTTATAAGTTTTGCAGTGCATTTTTTT GCTTGAAAGTCAGCTAAACGATATAGCGCTTTTGCAGCATTAATCTTTGA TACGCATTTTGGCGGGACGCTAGTGTGACTAACTGACTGAATGGTATTAC CATAAATTTGTCTGATGTCAACATCCCTCTTTCAAATCTGACACCCTTCT TTAGAGATAGGAATACTAGGAAGATCTGAATCACTGATAGATAAAAGGTT GATTCATCTCTGATTACCAAGCAAAGGAATGTAGTTTCCATCAGCAAATC CAACTGACCTATTATTCCCAGCTATAAAGAAGGTTGTCAAAAATATGACG GATGTCAATATTAGACCAACCAACAGTGACTGGAGAAAATCTATAAATTG AGCGCCTTGTTGAAAAAAGTTCGGTTACTTTTGGTTGAAGTCATTGTTCA TGCAAGAGGGTGTATAGGGAGGGATATGGCGAAGCTGTTGAGAGAAATGG TAAAAAAGTTTGGAATCGTTTTGGAATTTCAAGAATTTTGGTGGAAAAAA ATCTGGAAATGCGCTTAACCAAACAGAATTTCTTCAACGTTGAAGTTTTT TTCTAAAACTGGAATATTTTCTTCTGATAATCCCTAGATTCTGGGAGAGT TGTCAGCATTTTTTCGTGTGGCAAGGTGTGATAGGAAAAAATCAGGAAGG TTTCAAAGTTTAAATGGTTCAAGAGCTGAAGCCAGGGGATCAGCAGTAGA AGAATTTTAAATAAAAGGCCATTCCAGAATTTGTCAGTTTATGGTTAGGA AAAGGGCAGGAAAATTATTCAGAAATGTGAAAATAAAGTTTATTTACTTT CTTTTCTAGTTGCCAGAAGCAGAACGCTTCAAACAGAAGTTCCCACAAGG AGCACCAAGGCAGTCTGATTTTCTAAGAAAACGCTTACAAGGCAAAGGAG GGGTAAGAAATCTGCTGCTGCTTGAAAAATTGAAGTTAGATTCATCTATG TTTTTAAGTTCAGGCGTATTTTCGTCGGTGATAAAAAAGGGAAAAAACAG GCTTAAAAGGTTTTGTTTTTAAATAAGAGTGATATCGTTTGCTTACTCAT CAATTTTAATTCACAAGCTTTTTCACATTGGATTGACACGGATGTGCAGC AATATTGGTCAGAAAATGGAAAAGAAAAGCATTTTTTTTGCTTATATCAG CACAATTTAACAATAGAAAGACACTGTCCTTATATGAAATATGTGTCTGA TATGAAACAGGAATACTTATGTCAAAATGAAACCTTTAAAGATAATCATG ATTGTAAAACTAGTTTGGAATCTAGTAAGAAAATTTGAGTCTGTGAGTCT CACGCTCATAGTTGGCTCAAAACTAAGAATTACCTTTTCTCTACACATCT CTAACTGATATATTTGGGAGGGAATCAAAATAAGGTATTTTATAGTCCTT TTCGAAGAACTGGGTTTGTAATATTTATTGTGTTATCTTTTCCAGGCAAA GTATTTTGATTCTGGGGATTACAACATGGCCAAGAGCACTCATGGTAGGA ATGTTCCAACTGGGAAAGCCATTCCAACACCTGAAAATTTACCTCAAAGG AAAATCTCCTCTACCAAACAGAGTAATCTGATAGAAGGCGGCACGAGTCC CCCGCAGAGCGCTCTACCAGAGGAGAAAGCTGTGACTGAAGGTGAGCAGC ATAAATCAAAACAACATATCACTGAACAAGAATAA

Coding sequence (CDS) from alignment at sc0000245_pilon:247064..253498-

>XLOC_041555 ID=XLOC_041555|Name=XLOC_041555|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=738bp|location=Sequence derived from alignment at sc0000245_pilon:247064..253498- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTACAATGGCAACATTTAAAGGCCCACAAGAGATGTCTACAATGGC
AACATTTAAAGGCCCACAAGAGTTGCCAGAAGCAGAACGCTTCAAACAGA
AGTTCCCACAAGGAGCACCAAGGCAGTCTGATTTTCTAAGAAAACGCTTA
CAAGGCAAAGGAGGGTTGCCAGAAGCAGAACGCTTCAAACAGAAGTTCCC
ACAAGGAGCACCAAGGCAGTCTGATTTTCTAAGAAAACGCTTACAAGGCA
AAGGAGGGGCAAAGTATTTTGATTCTGGGGATTACAACATGGCCAAGAGC
ACTCATGGTAGGAATGTTCCAACTGGGAAAGCCATTCCAACACCTGAAAA
TTTACCTCAAAGGAAAATCTCCTCTACCAAACAGAGTAATCTGATAGAAG
GCGGCACGAGTCCCCCGCAGAGCGCTCTACCAGAGGAGAAAGCTGTGACT
GAAGGTGAGCAGCATAAATCAAAACAACATATCACTGAACAAGAATAAGC
AAAGTATTTTGATTCTGGGGATTACAACATGGCCAAGAGCACTCATGGTA
GGAATGTTCCAACTGGGAAAGCCATTCCAACACCTGAAAATTTACCTCAA
AGGAAAATCTCCTCTACCAAACAGAGTAATCTGATAGAAGGCGGCACGAG
TCCCCCGCAGAGCGCTCTACCAGAGGAGAAAGCTGTGACTGAAGGTGAGC
AGCATAAATCAAAACAACATATCACTGAACAAGAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_041555XLOC_041555-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000245_pilongenomesc0000245_pilon:247064..253498 -
Properties
Property NameValue
Aaloc130-369:241
Aaloc37-129:877
Aaloc1-36:6436