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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014429 ID=TCONS_00014429|Name=TCONS_00014429|organism=Clytia hemisphaerica|type=transcript|length=1164bp
TATCAATAGTCTTTTATCAAGTCCCTTGGTTTTGAAGATGGTATTGAGGC
TAAAAGTAACATTTAGAAAGGGAAAgaataactttaatttttagaGATCA
TTTTTGTGGAGTTTTGTCAGTAGAACAGAGGATTAAAAGAGCAAAAGAAT
TTTAGGTTTTAACCTTAGCCAAATAGTGATTGTGTGTTCCACATTGCTAC
CATTATGGATTGAAGGGCGTCCATTGGAAACTGCAACCTCCAACGATTGT
TCGTACATTGTTCGAAGGTGGGGCGTGACGTGCAAGAACGGAAAATTTGC
AGTGAACGCTGGAAGCCTTGAAAGACAGATGAAACAGATGAAGTTGATGT
TGAAAGCGTTCCAAAGAAGAACCAAACGAAATATTGCTCAAATGAATACA
GAAGAAAAGGATAGTCGAATGGTAATATCATCAACAACTAATCACAGGAA
ACTTTCAATAAAGTTCCAAAAGCTATGGCTTAACTAAAAAATGAATAGAA
ATGTGGCAAAGTTGCATTTTGTGCTGGGAAAAAAACATTTGCATTTTTTa
caacttgttttttttttaaattaaaaaccaTAATTTACCAAGCAGTTTCA
ATGCTAACTAGTGAACTTTCTGGAATTCCAATCTCAGTTTTTCCACTTTT
TATCATCAACCtaccacagatatcttacataaaacaataaaaagggCTTC
TTTATCTCTACTGAAATAAAGACACGAAGATGTACAATCAAGTGACTTTT
AGATATCTGTGCACCGGTAATGAAGTtagatttcaaatgaaaatcgCTGG
ATGAGTCTTTTTAGGAAAGCTTTCTTTGTTAACTTTTTCAAGggatcttt
ttgtttttccatCATCAATGTAAAAGAGTGTTATGTAAATAAGGGAATAA
ATATATTTAGAGTGTTATTATATtaaggccgctacccactcagcatttta
tggtcggcgaCCAAGGCGTACGGCTCAAGCACTTTGGTCGCTAAACACTT
TTCTCGTTCCACAAAACGACAGCCTTTGGAGgcttaatttatgcaataat
ggCTTGATTTATGCGAAAATTAAGCCACGCGCCTTGTTCGCCGACCATAa
gatgctgagtgggtagcggtCTTTACAAGTATGAAGGTTAATCAAGAATT
TTTCTTGATATTCA Run BLAST on NCBI transcript from alignment at sc0000187:262949..265075- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014429 ID=TCONS_00014429|Name=TCONS_00014429|organism=Clytia hemisphaerica|type=transcript|length=2127bp|location=Sequence derived from alignment at sc0000187:262949..265075- (Clytia hemisphaerica)
TATCAATAGTCTTTTATCAAGTCCCTTGGTTTTGAAGATGGTATTGAGGC
TAAAAGTAACATTTAGAAAGGGAAAGAATAACTTTAATTTTTAGAGATCA
TTTTTGTGGAGTTTTGTCAGTAGAACAGAGGATTAAAAGAGCAAAAGAAT
TTTAGGTTTTAACCTTAGCCAAATAGGTGAAGCGAAATTTAAGCATAAAC
TTGGTGACAAAAAACATTCTAGCTTGAAATTTAGGAGGATCTTATAAGGG
ATCTATTAAATGAAAACGTATTCAGCACTTTTAGTAGCTCAAAAGTAACT
TAAAAGCCTCTTAGACTTTTCTATAATCTTCGACTTCTATTGTGTTGCGC
AACAGCAAAACGGTCCAGACCGGTGTGAAAAATGTAAGTTTTGCGTGATT
AAAATAAGACTAAGTGCTACTAGGCTTGCAAGAAGGCGGTTGGAAAATCA
GTCACACTTTATCAACAATAAAGTACTTTTTATTGTTTATCAAACATTTT
CCCTATTGTTTTCCCCAAGTGTTTTGTAATAACATTAGCTTTGCTAGGTG
TCAAGGTTGGACTAGACTATAAAAGTGACCGATGATCAAAATGTGAAAAA
TCATTTGCTTTAAAAAATATTGAGAGCAGAACTTTTTGAAACAACTTACT
AAAACATATCATTATGTTCAATTATTCTCATTTCTTTGTAATAGTGATTG
TGTGTTCCACATTGCTACCATTATGGATTGAAGGGCGTCCATTGGAAACT
GCAACCTCCAACGATTGTTCGTACATTGTTCGAAGGTGGGGCGTGACGTG
CAAGAACGGAAAATTTGCAGGTAAGGATAATGCCATTGATATTTATTGAC
GTTGCTAATTTCTTTCTTGAAGTTGAAGTTTCTTGAAGCTTTCAAATTTA
CCTATGAAAATAGAATTGGACTTGGAGACCTTTGTTTTGTCTGAGTGACT
TAAAAAATTCCACAATATTAGTCTGTAGGTCAGAACAAAAGAGATTTTCG
ACGGATTTTTCAAATTAAGATTATTTTCTTTTCCAGTCATTTTTAACATT
CAAAATCAAAAATTTACCCATTGCAGGGGTATTACAAGCCTGTACAAATT
CATCGACAGATACAGTACTTCCCTGTAGTATTCAACTTCTCTATAAATTA
ATCTNGAAATTTACCCATCAGGGGTATATACAAACATGTAAAATTCCATC
GACATATACAGTTCCACCCTTTAGTATTCAACCTCTCTATAAATTAATCT
TTATTGCACTTGTAGTGAACGCTGGAAGCCTTGAAAGACAGATGAAACAG
ATGAAGTTGATGTTGAAAGCGTTCCAAAGAAGAACCAAACGAAATATTGC
TCAAATGAATACAGAAGAAAAGGATAGTCGAATGGTAATATCATCAACAA
CTAATCACAGGAAACTTTCAATAAAGTTCCAAAAGCTATGGCTTAACTAA
AAAATGAATAGAAATGTGGCAAAGTTGCATTTTGTGCTGGGAAAAAAACA
TTTGCATTTTTTACAACTTGTTTTTTTTTTAAATTAAAAACCATAATTTA
CCAAGCAGTTTCAATGCTAACTAGTGAACTTTCTGGAATTCCAATCTCAG
TTTTTCCACTTTTTATCATCAACCTACCACAGATATCTTACATAAAACAA
TAAAAAGGGCTTCTTTATCTCTACTGAAATAAAGACACGAAGATGTACAA
TCAAGTGACTTTTAGATATCTGTGCACCGGTAATGAAGTTAGATTTCAAA
TGAAAATCGCTGGATGAGTCTTTTTAGGAAAGCTTTCTTTGTTAACTTTT
TCAAGGGATCTTTTTGTTTTTCCATCATCAATGTAAAAGAGTGTTATGTA
AATAAGGGAATAAATATATTTAGAGTGTTATTATATTAAGGCCGCTACCC
ACTCAGCATTTTATGGTCGGCGACCAAGGCGTACGGCTCAAGCACTTTGG
TCGCTAAACACTTTTCTCGTTCCACAAAACGACAGCCTTTGGAGGCTTAA
TTTATGCAATAATGGCTTGATTTATGCGAAAATTAAGCCACGCGCCTTGT
TCGCCGACCATAAGATGCTGAGTGGGTAGCGGTCTTTACAAGTATGAAGG
TTAATCAAGAATTTTTCTTGATATTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014429-exon-sc0000187-1575043694:264900..265075 | TCONS_00014429-exon-sc0000187-1575043694:264900..265075 | Clytia hemisphaerica | exon |
| TCONS_00014429-exon-sc0000187-1575043694:264256..264381 | TCONS_00014429-exon-sc0000187-1575043694:264256..264381 | Clytia hemisphaerica | exon |
| TCONS_00014429-exon-sc0000187-1575043694:262949..263810 | TCONS_00014429-exon-sc0000187-1575043694:262949..263810 | Clytia hemisphaerica | exon |
| TCONS_00014429-exon-sc0000187-1510915933:264900..265075 | TCONS_00014429-exon-sc0000187-1510915933:264900..265075 | Clytia hemisphaerica | exon |
| TCONS_00014429-exon-sc0000187-1510915933:264256..264381 | TCONS_00014429-exon-sc0000187-1510915933:264256..264381 | Clytia hemisphaerica | exon |
| TCONS_00014429-exon-sc0000187-1510915933:262949..263810 | TCONS_00014429-exon-sc0000187-1510915933:262949..263810 | Clytia hemisphaerica | exon |
| TCONS_00014429-exon-sc0000187-1491911889:264900..265075 | TCONS_00014429-exon-sc0000187-1491911889:264900..265075 | Clytia hemisphaerica | exon |
| TCONS_00014429-exon-sc0000187-1491911889:264256..264381 | TCONS_00014429-exon-sc0000187-1491911889:264256..264381 | Clytia hemisphaerica | exon |
| TCONS_00014429-exon-sc0000187-1491911889:262949..263810 | TCONS_00014429-exon-sc0000187-1491911889:262949..263810 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000187 | supercontig | sc0000187:262949..265075 - |
Blast
The following BLAST results are available for this feature:
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