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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000043_pilon:592081..596304- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_008587 ID=XLOC_008587|Name=XLOC_008587|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4224bp|location=Sequence derived from alignment at sc0000043_pilon:592081..596304- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACGCCGACAATCCACGATCATCCGCATGTTGTTGATTTCGTCAACGA
CGGCAGTAAGTGAAACAATCAATTTTGAATCTAGCTTAGACTGTTGACTT
TTGCCATTCCTTCTTTTATTTGTTTACGAAGGTCGGTAAAAGTCGGCAGA
AAGTCATTGGAGTGCCTTCTTTTAACTTTTTTAAAGGGTTTTCAATTGAA
ACTGTGAAGTTAAAGTTAAATTTTTTCTATAATTCGCAAACTTGGAACAC
TTCGTAAAATTTTTCCTATAATTCGAAGAGATTGGACTTTCTAATTGAGA
TGCCTTGGAGTTTTTACAACATACTTCACTAATTGGTCATTTAAAGTGAT
AGAGATGACGCGTTCTTTAGAAAAAGTAATAAGATTCTTTTATTACATCT
TAACGACCAACCAAATCAAATAAGAGCTTGTAAAAACTCCAGCTTGTCCC
GTTGTATGCTTGCTGAACTTTGCTTTTTGATGACTTTTATGACGTTGAGT
CCAGACGAAGTAGACTAGTAGTAATTGACAAGGTCGCCATTTTGGAAAAG
AATGTTTAAAATCCCAAACAACAAAAAAACTACTTACTACAGTTGCAAAA
TATATTTAAAAATGGGAAACAAACATGATTAATAGATTTGAAATCCCTTA
TTTTCAAATAAAAAACATTGCTTCATCCTATTTTTACGTTCCAAAAGCAA
CTAAAATCTCTCGAACCACACAGTCTAGAAAAAAGCTTTAATTTGACCCC
AGGCTAGTTTTAGCCTTACCGCAAAACACATCTCACTTTTCCTCATTTTT
TCAGTTAGGCGAAGGGAAGATAGCGAGTTGGTGGACGGTGATGAAAGAAT
ACGGAAAACAAGCCGGAAGAGAAGGAGTTCCGGATCACAAATTAAACTCT
GGGCATCAACAACTATTCCTTACGTAGTGGGAAGTGGTGGTAAGTTCGAT
GATTTTTAAAATTAATTTAATTTCTGATTGTGTCTGGAAAAAGGCTATGA
AATGAGTGCGTCGAATCAGATGTAAGGTCCGAAGGCTAATATTTTCTAGA
ACCGTTTTAGTCTGAATAGCAGACCTCTATAGACATACTTCCTAGTTTCT
ATAAGATTTTTTTTTTCGCTAGAGGATAAGCAGAAGCCTAGAACCGTTTT
AGAAAATATTTCTTTATGTTGTGCACTAATCTATTTATTCTAACTAAAAT
TTCTTCAATGCCATACCCTGAATTTTTGTATCGTTTTTTATAACTAAAAC
CACCTTCGCTCATCCAGCTACACTAGACGGGTATGACATGGAGATCGAGA
ATGCTTTGGCCAAGTTTTCCGAACACACCTGTTTGAAGTTCGTCCGTCGG
ACAACGGAGAAAGATTATATCAAGTTCATACCAAACCAAGGGTGAGTTTT
CATGTTTTATCCTGTGCACACTTCGAGGCTCTCTTGTTATGCCCTGTGCA
CACTTCGAGGCTCTCTTGTTATGCCCTGTGCACACTTCGAGGCTCTTTTG
TTATGCCCTGTGCACACTTCGAGGGTCTCTTGTTATGCCCTGTGCACACT
TCGAGGCTCTTTTGTTATGCCCTGTGCACACTTCGAGGGTCTCTTGTTAT
GCCCTGTGCACACTTCTAGGCTCTTTTGTTATGTCCTGTGCACACTTCGA
GGGTCTCTTGTTATGCCCTGTGCACACTTCTAGGCATTTTTGTTATGCCC
TGTGCACACTTCGAGGGTCTCTTGTTATGCCCTGTGCACACTTCGAGGCT
CTTTTGTATGCCCTGTGCACACTTCGAGGGTCTCTTGTTATGCCCTGTGC
ACACTTCGAGGCTCTCTTGTTATACCCTGTGCACACTTCGAGGCTCTCTT
GTTATGCCCTGTACACACACCTTGTTTCATATATAGTAAAAAGGACGCAA
TTAATTAATACAACACTACCTTATCGGGGAAAAAAATGAGGAAAATTTTG
AGGGGGTGACGAAATTTTCCCCTGACAAATTTTTTCCCCGATATTTATCA
CCCGACCAAAACTTTTAACCGATTTTTTTATCCCCCGACCAAAACTTTTA
TCCGATTTTTTAAACCCCAACCAAAATTAAAATCTAAATTTTTTACACCT
TTATTAACTGAAATTGGTGCTTTAAATGTCGAATTACAAGATCTTTTTTC
GAATTACATAGTGAAGAAAACCATTTCATTTGGATAATTTAGTTGGGTGA
AAGTGACTAAATTGTAAATTTCGTCGAGGAAAAGTGACGAATTTGAAATT
TTGGTCGGAGGAAAGTGACGAAAATGCCTCTAAGGCTTTTTTCACATACA
CGTAAAGTTTTACTTTAGATATTACAGAAATCGTTTGTAAGGCTGTCTTT
TGGGAATTTCCCCGACATTATGTAGAGTTTTCGTCGATTAAGATGGTCTT
ACGTGACTTTTCCTTCCGTTCAAAACTTTTTAAACGTAAGAAAACTCCAC
ATAAGGCCTTAAAACACTACGTAAGCTTAGGGAAATTCCCCAACCTTCAA
GGTCTTAAGTAAATTTTACTTACATGTAAAAAAAGCTTCAAAATTTTTCC
CCGACGAAAAAAAAACCCCGACTAAATAAAACTCTGACATTTTTTTCCCC
AATAAGGTATAAGGCACATGTGAAAAAAGCTTCAAAATCAGTCACGTTGA
AACAGACTCGCAATCATATTTATACATTTCGAGTTAATTTCTTCATTTTT
TCTTTACTTTATTACTTTGCAGCTGTTGGTCTTACGTAGGGTACTCGCCT
GATAAATCGGGTGTCCAAGAAATTGCCATCGACGAATGGTCTTGTCTATT
TGAAGATCTTATTCAACACGAGGCAATGCACGCCCTTGGTTTTTGGCATG
AACATCAACGCCCCGATCGCGACCAGTATGTCGTCATTCATAAAAACAAT
ATACGCGAGGGTGAGTGCTGTTTAAAGCTTTTAAAGCTTTTATTACGAGA
TATGTAAAGTGTATCGAGATTTTTATTTTTTTATGAGGTTTAATAAAGGA
TTTTGAGAAATTCTAAAAACATTTGCTCTCCTTCATTAGTTTTTTTCGAG
GTTTCAGAAGGTTTAACGATATTTTTTAACGAGTCTTTTACAAAAAAGTT
TTTTACGTCAATTCAATAATTTTAAAATATTTTTATAAGATTCTCATATA
AGCGAAGAGAAAGGGTTTTAATATTGTGGGAGCGTTCGCGTTAATGAATT
TACTTCTTAAGTAAAAAAAACGTACTCTTCTTCTGTTCTTTCAGGGAAGG
AACACAACTTTGATATTGTTTATGACTGGATTGAAGCAGCCAAGTCGGAA
AAATATGACGTCAAAAGTGTTATGCAGTATGAGAGGTTAGATGAAATTTC
ACACATTTTCTCCCTCGTATCAATTTCCAAACTTTTGATATACATTGTCT
TTTCTACTTCAACTTCATGCCTTTGCTCTCTTACCTCCATTCCTTTTGAC
ACGCTTTGCGACGTTTTTTCGCTTTCTCCCATTATCATTTTGGATGAATC
TAATCTAATCTAATTCTCTTTTAGATCTTATTTCACCAATAATTTCGACT
TGTTTACGATGGAAATGAAAGGAGGAGACAAATCCGAACTTGGAGGATAC
GAACTTACCAAAAGTGATATCAAGGAAATCAACAGAATGTATTGCCGTGG
AGAAAGTCCCAAAAAGCCAACGACAACTACAAAAAAAACTACGACCACTA
CAACAACGACCACCACTAAAAGGCCAACGACCACCACTAAAAAACCAACG
ACCACCACAGCAACGACTACCACTAAAAAGCCAACGACCACCACCAAAAA
ACCTACGACCACTACAACAAAGAAATCAACTAAAAAACCTACGACCACCA
CAACAACGACTACCACTAAAAAACCAACGACCACCACTAAAAAACCTACG
ACCACTACAACAAAGAAATCAACTAAAAAACCTAGGACAAAAGCTAAAAC
TACGACTACAACGACCACCACTAAAAAACCTACGACAACCACTACAACAA
AGAAATCAACCAAAAAACCTAGGACAAAAGTTAAAACTACGACTACAACC
ACCACAAAAAAACCTAGAAGAAAAGCTAGCAAGCGAGAAAGGAAGAAGGC
ATGCGTGAACACTTCTGTACATTGCAATTTCCCACCGGACAGTATTTTCT
GCGGAATCTCTTTCTATTCTAAAGGATGTCAGAAGACCTGCGAACTGTGC
TCATCCGATGAAAAGGAAAAATAA Coding sequence (CDS) from alignment at sc0000043_pilon:592081..596304- >XLOC_008587 ID=XLOC_008587|Name=XLOC_008587|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2586bp|location=Sequence derived from alignment at sc0000043_pilon:592081..596304- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACGCCGACAATCCACGATCATCCGCATGTTGTTGATTTCGTCAACGA
CGGCAATGACGCCGACAATCCACGATCATCCGCATGTTGTTGATTTCGTC
AACGACGGCATTAGGCGAAGGGAAGATAGCGAGTTGGTGGACGGTGATGA
AAGAATACGGAAAACAAGCCGGAAGAGAAGGAGTTCCGGATCACAAATTA
AACTCTGGGCATCAACAACTATTCCTTACGTAGTGGGAAGTGGTGTTAGG
CGAAGGGAAGATAGCGAGTTGGTGGACGGTGATGAAAGAATACGGAAAAC
AAGCCGGAAGAGAAGGAGTTCCGGATCACAAATTAAACTCTGGGCATCAA
CAACTATTCCTTACGTAGTGGGAAGTGGTGCTACACTAGACGGGTATGAC
ATGGAGATCGAGAATGCTTTGGCCAAGTTTTCCGAACACACCTGTTTGAA
GTTCGTCCGTCGGACAACGGAGAAAGATTATATCAAGTTCATACCAAACC
AAGGCTACACTAGACGGGTATGACATGGAGATCGAGAATGCTTTGGCCAA
GTTTTCCGAACACACCTGTTTGAAGTTCGTCCGTCGGACAACGGAGAAAG
ATTATATCAAGTTCATACCAAACCAAGGCTGTTGGTCTTACGTAGGGTAC
TCGCCTGATAAATCGGGTGTCCAAGAAATTGCCATCGACGAATGGTCTTG
TCTATTTGAAGATCTTATTCAACACGAGGCAATGCACGCCCTTGGTTTTT
GGCATGAACATCAACGCCCCGATCGCGACCAGTATGTCGTCATTCATAAA
AACAATATACGCGAGGCTGTTGGTCTTACGTAGGGTACTCGCCTGATAAA
TCGGGTGTCCAAGAAATTGCCATCGACGAATGGTCTTGTCTATTTGAAGA
TCTTATTCAACACGAGGCAATGCACGCCCTTGGTTTTTGGCATGAACATC
AACGCCCCGATCGCGACCAGTATGTCGTCATTCATAAAAACAATATACGC
GAGGGGAAGGAACACAACTTTGATATTGTTTATGACTGGATTGAAGCAGC
CAAGTCGGAAAAATATGACGTCAAAAGTGTTATGCAGTATGAGAGGGAAG
GAACACAACTTTGATATTGTTTATGACTGGATTGAAGCAGCCAAGTCGGA
AAAATATGACGTCAAAAGTGTTATGCAGTATGAGAGATCTTATTTCACCA
ATAATTTCGACTTGTTTACGATGGAAATGAAAGGAGGAGACAAATCCGAA
CTTGGAGGATACGAACTTACCAAAAGTGATATCAAGGAAATCAACAGAAT
GTATTGCCGTGGAGAAAGTCCCAAAAAGCCAACGACAACTACAAAAAAAA
CTACGACCACTACAACAACGACCACCACTAAAAGGCCAACGACCACCACT
AAAAAACCAACGACCACCACAGCAACGACTACCACTAAAAAGCCAACGAC
CACCACCAAAAAACCTACGACCACTACAACAAAGAAATCAACTAAAAAAC
CTACGACCACCACAACAACGACTACCACTAAAAAACCAACGACCACCACT
AAAAAACCTACGACCACTACAACAAAGAAATCAACTAAAAAACCTAGGAC
AAAAGCTAAAACTACGACTACAACGACCACCACTAAAAAACCTACGACAA
CCACTACAACAAAGAAATCAACCAAAAAACCTAGGACAAAAGTTAAAACT
ACGACTACAACCACCACAAAAAAACCTAGAAGAAAAGCTAGCAAGCGAGA
AAGGAAGAAGGCATGCGTGAACACTTCTGTACATTGCAATTTCCCACCGG
ACAGTATTTTCTGCGGAATCTCTTTCTATTCTAAAGGATGTCAGAAGACC
TGCGAACTGTGCTCATCCGATGAAAAGGAAAAATAAATCTTATTTCACCA
ATAATTTCGACTTGTTTACGATGGAAATGAAAGGAGGAGACAAATCCGAA
CTTGGAGGATACGAACTTACCAAAAGTGATATCAAGGAAATCAACAGAAT
GTATTGCCGTGGAGAAAGTCCCAAAAAGCCAACGACAACTACAAAAAAAA
CTACGACCACTACAACAACGACCACCACTAAAAGGCCAACGACCACCACT
AAAAAACCAACGACCACCACAGCAACGACTACCACTAAAAAGCCAACGAC
CACCACCAAAAAACCTACGACCACTACAACAAAGAAATCAACTAAAAAAC
CTACGACCACCACAACAACGACTACCACTAAAAAACCAACGACCACCACT
AAAAAACCTACGACCACTACAACAAAGAAATCAACTAAAAAACCTAGGAC
AAAAGCTAAAACTACGACTACAACGACCACCACTAAAAAACCTACGACAA
CCACTACAACAAAGAAATCAACCAAAAAACCTAGGACAAAAGTTAAAACT
ACGACTACAACCACCACAAAAAAACCTAGAAGAAAAGCTAGCAAGCGAGA
AAGGAAGAAGGCATGCGTGAACACTTCTGTACATTGCAATTTCCCACCGG
ACAGTATTTTCTGCGGAATCTCTTTCTATTCTAAAGGATGTCAGAAGACC
TGCGAACTGTGCTCATCCGATGAAAAGGAAAAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000043_pilon | genome | sc0000043_pilon:592081..596304 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 940-1320:382 |
| Aaloc | 910-936:409 |
| Aaloc | 868-900:442 |
| Aaloc | 595-852:700 |
| Aaloc | 505-591:979 |
| Aaloc | 316-501:1502 |
| Aaloc | 193-312:2956 |
| Aaloc | 58-189:3419 |
| Aaloc | 1-54:4225 |
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