XLOC_028662 (mRNA) -

Overview
NameXLOC_028662
Unique NameXLOC_028662
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000045_pilon:1911699..1912942+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_028662 ID=XLOC_028662|Name=XLOC_028662|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1244bp|location=Sequence derived from alignment at sc0000045_pilon:1911699..1912942+ (Clytia hemisphaerica_ch_hm2_pilon)
ggAACCATTGAAGATACAGAAATGGTAGATGGTCTCGTCCTTGATCACAG GATTTCACATTTTGCTGAAGGTGTTGGTCGTATAGAGAAAGCTAAAATTG GACTCATTCAATTCTGCATTTCTCCTCCCAAAACTGACATGGAAAACAAC GTTATTGTTAGTGACTACACACAAATGGACAGAGTTTTACGAGAAGAGAG ACAATACATACTTAGCATTTGTAAACAAATCAAGAAATCTGGTTGCAATG TTGTCTTACTACagaaatcaattttaaggtaCAACTAATCTCAGATTAAA AGCTTTTACATGTGATACATTATTCAACGGGTGTAGTATGAAGGTAGAGT GTCTAGCAACGCTGTGCAAGGTTGTAGGTTCTAACCCCGGCCTAGTTATG CCAAAGATTCCCAaatgatgcctctctgcttgatgctcagtaacTACGGA GATGGATCAAGGGTAGGAGAAATCCATTGAAAGGAGTAGTGCCCTCCCCT actttcgggtagatagcttGAGAAAAGGGAGAATTGGGGTCGCCCTGAAC TGCAGTTGCAAACTTACTATTCACCTCCGACATGTCAGGCTGAAGAATGT ACTTGGTTTTACTCATTTGCATCGACATTTACTTTAGTATCAGCTGTAGC CCTTTGAAATAAGAAAGTGGTAATACTATGTAAAGCCTGTTACAAATTTT AGGGATGCAATTAATGATATGGGGTTACATTTCCTCGGCAAAATGAAAAT CATGGTTGTCAGAGATATCGAACGAAACGAAGTAGATTTCATTTGCAAAG TAAGTTACTCTCACAACTCTCTGTaaaaaaaaCGTTATGtctaaaaattg gaaaaatttgtcACTTGAAATTGATTGAATATAGTTGTTCTGGTGTTGAC TGTTCTGTTGTTCCGTAGCAGTCGCGAAACCAACACATCTGGCTAATGTA CtactcaatttcttttgttatttaaaagtAACTTTCCCTCGAAACATAGT CATCAAAACACAAGtttttttCAGAGActtgagaattttttcaaacttat aCGACTTGGTCTTGTCTGTTGATTGGTCTGATCTAATTATTTTCTTCTCA TAGACATTAAATTGTCGCCCAATTGCCAGTGTTGACCATTTGAATCCTGA AATGTTGGGATCTGCTGATCTCGTTGAAGAATTCTCTACAGGTGCAGCTA AAGTTGTAAAGGTAAAGCTCATTGTTTGTAGAAAATTCTTCTGA

Coding sequence (CDS) from alignment at sc0000045_pilon:1911699..1912942+

>XLOC_028662 ID=XLOC_028662|Name=XLOC_028662|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1032bp|location=Sequence derived from alignment at sc0000045_pilon:1911699..1912942+ (Clytia hemisphaerica_ch_hm2_pilon)
ggAACCATTGAAGATACAGAAATGGTAGATGGTCTCGTCCTTGATCACAG
GATTTCACATTTTGCTGAAGGTGTTGGTCGTATAGAGAAAGCTAAAATTG
GACTCATTCAATTCTGCATTTCTCCTCCCAAAACTGACATGGAAAACAAC
GTTATTGTTAGTGACTACACACAAATGGACAGAGTTTTACGAGAAGAGAG
ACAATACATACTTAGCATTTGTAAACAAATCAAGAAATCTGGTTGCAATG
TTGTCTTACTACagaaatcaattttaagggAACCATTGAAGATACAGAAA
TGGTAGATGGTCTCGTCCTTGATCACAGGATTTCACATTTTGCTGAAGGT
GTTGGTCGTATAGAGAAAGCTAAAATTGGACTCATTCAATTCTGCATTTC
TCCTCCCAAAACTGACATGGAAAACAACGTTATTGTTAGTGACTACACAC
AAATGGACAGAGTTTTACGAGAAGAGAGACAATACATACTTAGCATTTGT
AAACAAATCAAGAAATCTGGTTGCAATGTTGTCTTACTACagaaatcaat
tttaagGGATGCAATTAATGATATGGGGTTACATTTCCTCGGCAAAATGA
AAATCATGGTTGTCAGAGATATCGAACGAAACGAAGTAGATTTCATTTGC
AAAGGATGCAATTAATGATATGGGGTTACATTTCCTCGGCAAAATGAAAA
TCATGGTTGTCAGAGATATCGAACGAAACGAAGTAGATTTCATTTGCAAA
ACATTAAATTGTCGCCCAATTGCCAGTGTTGACCATTTGAATCCTGAAAT
GTTGGGATCTGCTGATCTCGTTGAAGAATTCTCTACAGGTGCAGCTAAAG
TTGTAAAGGTAAAGCTCATTGTTTGTAGAAAATTCTTCTGAACATTAAAT
TGTCGCCCAATTGCCAGTGTTGACCATTTGAATCCTGAAATGTTGGGATC
TGCTGATCTCGTTGAAGAATTCTCTACAGGTGCAGCTAAAGTTGTAAAGG
TAAAGCTCATTGTTTGTAGAAAATTCTTCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_028662XLOC_028662-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000045_pilongenomesc0000045_pilon:1911699..1912942 +
Properties
Property NameValue
Aaloc376-516:1104
Aaloc280-375:704
Aaloc1-276:1