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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000119_pilon:6156..13771- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038532 ID=XLOC_038532|Name=XLOC_038532|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7616bp|location=Sequence derived from alignment at sc0000119_pilon:6156..13771- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATTCCGCACATTGTGATGATCGCAATTTGGCACACAGTGCTACTGG
TAGAAATGTCACCAACAAAGTTGACAGCGTCGTTGAGACAGCGAAACTTA
AAGAAGACCATGACAAGCAGATTCAAAAATTGACATTGGAAAACAAGATC
AAGTTTCTTGAATCTGAAAATAACCATCGAATGAAAATCATGCAGCTTGA
AAAGGACAATCAATCGTTAACTCATGAGCTGGAACTCTTGAAGTTGAAGA
CCTCGCATGAACAAGAGGCTAAGAAAGTCGTCGTTGATCGTGAAATGGAG
AAAAAAAATGCTGAAACAGCAAAATGAATTCCAAAACAAACTTACTGAAA
AAGACAAGGAGCTAGCTGGAAAAGACAAGGAACTAGCTGAAAAAGACAAG
GATATGGCGGCAAAAGAAAATGAGTTTAAATTGAAATTGGCTGAAGTGGA
GAACGCGAATAAGCTGAAAATTGCAGAACATGAAAACGTAAACAAATTGA
AACTTCTTGAAAAAGAAAAAGAAATGGCAGACAAAGTGAACGAGTTGAAT
TTGAAAATCAAAGTGTGGGAAACTCTCCATAATAAGACTGAAGTGAATGA
CGTAGCTTCAGGCGTGAACATCATTCAGAAGAAGCAAGATGGAGCCCAAG
CAAGGAATATTACCAGGGCTGATAAGTTGGCTTGGGGAGCTGATAAGTTC
TTTGAAAGTAAACCAATCAAGCTCAATTTGTTTGCATCGTATCAAGATTG
GTATGAAGAAATCAGTTCGTTGCTACATAGAGAGAAAGAGATTGTTTGGA
GTAGTGCATCGAAATATGTGTTCGTGAAAAGAGACTGTGGAGAATATTTC
GAGAATTTACGGATGATCACACACAGAAAGGGACGAGCGAGACAGAATCA
TTCTGATATCTTTTACATTGAAGATGATGAAAAACAATTTTGGAAAAAAA
CGACATTTATGTTACTCCACCCATTACAGCATAATAAAAGTTTGAAAATG
GTTGAATGGTCGACAGGAAAAGACCATGAACAATGGAAAGTCTCCAATGT
TTCAAACGACTTTTATCATGGTAGGGAAAAGTCTGCCATTTTGTTTGGAA
TTTTTGATAGAAACGAGGATTAATTTCACAAAAAGTCCTCAAGAAGGATT
TCTATTGTGAATTTTGACAACATAATAACATAGTCATGAAAAGATATTAA
TATTGATTACTTTAATTTTCGCGCATCTTGTAATTTCTGATACATTTTTT
CAGTGTTTTCGCAGGAAAATATACATAAATATAAAGAAGACAAAATAGGC
GTGGAATCAAAAGTCCCAGAGGTATATTTAACATAATTAGAGGGCTCTTA
TTAGTTTCTTTAAAAGAGCGCAAATATGTTATTCTTGCAGATTTAAAGCT
TAACCTTTAATTTTCGTGCAGGATAACGCGCTTATCTGATATTCCGATGG
CGGATTGGCGGCCGTTCACCTTAAAGCTCTAAAGGAGAGGGCCAATTTCC
CATCGGAGATGATTGATAGTCGGCCTTTAATGTCCCGCATCCCCAGTCGG
GTTCAACTACGTTTGAGCGTAAAACCAAATATTTCGATTAGACCCGTCAA
TCCACGAAATTGAGGACTTGGTTACCAGGCCTGCCACTGAAAAATCATTG
ACACGGTCTTGCGAAATTCCGTAATCTAAACCTTCCAGATGTTGAAACTT
TTCCCGACCTTCAGTAGGGACCGCGAAAGACGGGGGTAAAATGGTTGGAA
TCGACCAAAATGTTGTTTTTAGGTTTTAGACCACCTATAACCATGGGATA
AGTTTTAGAAGCATTCTTATCATTAAATAAATGTCCTGTAAAAGTTTGGT
GGCCATAACTTTATTTTTTATGAAAATATGAGCAATTTTGTAAAATTTTG
AATGGCAGACAACCTACCAACAGAAAATTGGATTTAGACAGGTGAGCGCG
TCCTCAAACCCCCATGATGTTATACATTTTTGGAACTGGAAGAGATCAGC
GCTGTTTGTTTTTTTTGTCTCACTGACCCAATCAAATCCTACAAAAAATT
ATTCAGTTTTTTCTGGGAAAAAGCCACTTTTGAGGGCTTTAGCTGTCCTC
CCCGGCATTAAGACAAAGATAATATGAAATTTCAACCTTTTTTACATGTT
GTTTGTTAATAAAAATTAACATTTTCAACCGCGCTCTGCTGTTTTTTTTG
GCTCAAAGTTTATTGGTATTCGAGAAATTCTACAGAATTGTCGAGCGCGT
GTTTGTTTACAATTCGAAAGTTCAAAGTCCACGGAGAGTGACAATCTGCC
AACTCTCCGGCATACAGGATATTTTTGATTCATTCGTACGGCAAACGAAA
AATTTGAAGAAAAAAAATTGATAAAAAATTAAAACTTTGTCTTGAGAACC
TTCGTGCCAAGTTTCAATGCTATAGCATTAATAGAAGTAAAGTTATTGCA
AAAAATGTATTTTTTGACATAACCCCCGGATTTTCACTTTTAAACCTATT
TAACCATGATTTTTACAAAAATCCTCGAAAATCGTTCCAAAAAAAGGGTC
ATTTTCAGGAGATAGAAAATTTCATATCTCGAGAACGGCTTGGCCGATTT
TGATGAATGACCCCTCATTTTTTTTCTTTTTTGATGCTCTTTCCAATGAG
CATGGTTTCAATGCGCTAAAAACAATTTGAAAAAATCATTGCGGTCCCTA
CCTTCAGAGCTTTAGCGCGTCGGATGAAAATTTCCGTGTCCTGTTTTGAA
TACCTAGAATGTGCCAACTTAATAGACTAGAGTCTACTTCTAAGTGAACT
TTGCTTTCTGATAATTTTGATGACGCTGAGTCCAGTGTAGTAGACTAGAG
GATATCGCCGTCTCGGAGTTTTTCGCGATCTTTTTCAAATTTCTTTGTAA
AAACATTAAAACAATGAAATATATCTAAAATCCCATCATAGTTTATGAAA
CTTTATTAAAAACATGAAAGATCTTCCAAAATTGGTAAATTGATAATGTG
CGAGTTTTGCCTATCTGACTTTTTTAACAAAGTTGACTCATATCCTACAA
AAGTTGCGCGGCCTAGCGCGGTCCACCTGGTCTTTACACAAATGACAGAT
GAAACTAAAATTTACACCTAAATTTCGAAAAAGATATCACTCGAAAACAA
AGTAGTGAGGTCAGGTAGCACATAAAAACGTAAGAATACTTCAGATGGTG
ATTAAAGCATGAAATTTGGCACAGATGATCCTTAGAGGGTCTAAAACTTA
ATTTTAAACAGTAACACCAAATTTTGCCACCTGGCCACCTGCCAGATGAC
GTCATCAGGTGGCTAGGCAAAAAATTATTTTTTTGAAAATATTCAAAATC
TGATGATTCCAGCGGAAAGAGCATGAAATGCTGATAAAAATTGAGGTATA
AAACATGCCTTGAAAATCTTCCTATCAAAAGTTATGGACGTTGAAAGTTT
TTTGGTGACGTCATCATAAGCCTTTCCAGGCAAAACTTAAAAACCTCGTA
ATTTTGGTACAAATTGACCAAATTTCATGTTATATACATGAATTCACATC
AAAATTCATTACTTTTTCCGATTCCGATGTTCAAATTGAATTAAAAGCTT
TAAATCCTACAGAATACTAAAACTTAGATTTTGAGCTTTACAAGGCAAAT
CAACGCAGCGTTCTCCCTTCAGGAGCACAGTGTACAACCAACTAATTTTT
TTGGATGTTTTAAGCCTTCCTATGTTGTTTAGACTTAAGCATCAAGGAAC
TTCAAATTTTGACATGGATTCATGTATAAAACACTAAATTTGGTCAACTA
GTTCCGTTATTACGGGATTTTAGGTTTTGCCTGGAAAGGCTTATGATGAC
GTCATCACAAAACTTTAAACCTCCATAACTTTTGATAGGAAGATTTTGAA
GGCATGTTTTATACCTCGATTTTCATCAGCATTTCATGCTCTTTCCGCTG
ATACCATCAGATTTTAAATATTTTCAAAAAAATAAATTTTTGCTGAGCCA
CCTGATGACGTCATCTGGCAGGTGGCCAGGTGGCAAAATTTGGTGTCACT
GTTTAAAATTAAGTTTTAGACCCTCTAAGGTTCATCTGTGCCAAATTTCA
TGCTTTAATCACCATCTGAAGTATTTTTGTGCTAACAGACCTCACTAAAG
GAATCGCTAAATTCAATCCGTCGTCAAAAATACGGCGCATATTTTAAGGC
TTCACTTTTTTCTTGCCTGAGAAAGGTCAAAGATTCGATTCTAGCAGTTC
GGAATTATACTTCATTGGTTTTTTCTTTTCTATTTTCTGGATACCCAGGC
TGTTATAAACAAAGCGGGTCGATTATACAGATTTCAAAAATATAATATTA
AGGTGATATTGCTGCGTTTGTAGAAAACCCAAAAGTGGATTTATAAACAG
CATTCTAAAATTTGGAACGACATCAAGAAAAAGCTCTAATCTCAATTATC
GAAAACCAGCCATTTCGAAATTCTAATGGAAATATGATACAACAAATAAC
ATTTTAAATAAACACGAACAAAATAAAATGCGAGAAGAGGCGCACAAGAA
AAAATAACTTTCTTCGTTTTCAATAGGAGGACATTTAAAGGTTTTATTTT
TACATAAGTTTTCCCGTTTCATATCAGTCACATATTTCATATCAGGACAG
TGTCTGCCTATTGTTTTTATTATGCTGATAGAAGCAAAAAATGATTTTCT
TTTCCTTTTTTTTGACCAATCTTGCTCCACATCCGTGTCAATCCAATGTG
AAAAAGCTTGTAAGTTAAAATTGATGAGTAAGCAAACGATATCACGCTTA
TTAAAAATCAAAACCTTTAACAGCGTCGCGATAGCTTTTCGTGAACTAGA
AAGAATAAAAAGGGAGAGAAAAAGATGGCTAGAAATCTTGCCCATAATAC
CAACGGAACAGACTGGTACACGGAATTTAACTGTAAAAGGACAATCAATC
GTTGACTCATGAGCTGGAGCTCTTGAAATTGAAGACCTCACATGAACAAG
AGGCTAAGAAAGTTGTGGTTGATCGTGAAATGGAGAGAGAAATGCTGAAA
CAACAAAATGAATTCCACTTTGCTAGCGTAGCCGGTCAGAGCATCTTACT
AGTATACATAATAATATATAGAGAAATACCATTCCCTTGAGAACGAAACA
TGTCGGGAAAAATCAAAATATAATAGCCCGCATTCTTTTTCACCGTCCAT
CATAATAATTTTATAAATATGAATATTTTTCTAGACTTTGCACATATATA
CTATATAATATTTTCAGCCGAAGAGCCAAATGTAAATTTTGGAGATTGAA
ATATACCATTATTATTATTGTTATTATTATTAAAACAAACTAACTGAAAA
AGACAAGGAAATGGCGGCAAAAGACAAAGAACTAGCTGGATGGAACGTTT
TTCTCTCACAAAAACAAACTATATAACAAGAACATAAGGCTTAGATGGCC
AAAACGTTAAAAACAAGTTAAGAACTTTGGAGACTTTAAAACCCCCGATT
TCTCCAGAAAATGGACAAAAAGACTCAGAAAACGGTGAAAATAAGAACAT
GTTGAGAACCTCTTTAGGCTTTAAAACTCAAAAAGATAAGAACAACCAAA
GGCTTTAAAGATATTGGAAGTTCTTATAAAAAACATGTAGAAAATCTCTC
CACACTCATAATTTGCCATTTTTTAATATTTCGTTCTAACTGAGAAAAAT
ACAAAAGCTAGCCTGTCTATGGTCAAATTCACTTAGATCGTCTGTATATT
AAATTTAACGAGGCAACGATTGCGCTTTGCGCACCACAATAATAACTCAC
AGCTAAGAACAAGCCAACCCTGGGTTCACAGTGGTCTAGGAGCATTATTG
TTATTAGTGCCGGCATGTAACGAAAGAAAGAGAGTAAAAAGTCTCTCTCT
CTCTCAATTCTTGTAAGAACCCCTTGCATTCCTCTTAAAGACATGACACA
CATGAACAACATTTAGAGAGAATTTGATACCAGAACAAAACAAGACGACT
TGAAGTCGAAAATTTCGCCTAAAGTTTAAACTGCATGGGAAAAACAAGAA
GTAGGGATGGAAGTCAATCTGAAATCTACATAGTTTACATTGACGAAACA
ATTTTACAAGAAAAGCGAGGCTCAAAATCGCTAAAAAATAAGACCAATTT
AAGAACAATGGTTGTTTAATTCTTAAGAACTAATAACCGAAGGGCCATAC
CATGCCTATCGTAATACTTTCGCTAGGTTAGACTAGTAAACTAGTCGGTT
ATTACTTATAACCTTATAATAAAACTGTCAATCAAATAATGTAAACACTA
ATTAAATATTCAGCGCGCGTGAGAGAAAAGGAAAATAACCGACTAGAAGC
TGCTTGAAATTCAGAAAAGAGACGCAACTTCACCCCTTCGATTCTTTTTA
TTTGGAGCTTGATTTTTTGTATATGGGTCTGTTTTCAACGACTAGTTTAC
TAGTCTATCGCTAGGCGAAATTAATAAACTCGATGTTGAACAAATATAAA
TATTCTTTTTAAAATCTTGTTATTACACTGATATAACACTTTTCTTTGTA
GGTACGATTATCAAGTACTATCAAAGGATTTGATAAACAAACAAAACATA
AAGAAAATTTCAAGTTTGAGCGAAAAACCGAGATTTCTTTCGAAGTACAT
GTTATTGCTGGTTATATAGAAACTATAGAAACTCTAAGTTACATTAGCTA
AGGTTGAAACGAAAAAATGGATTCTGCAAACTTTGACGATCGCAATTTGG
CACACAGTGCTGCTGGCAGGAATGTCACCAACAAAGTTGCCAACAGCGTC
GTTGAAATCGCGAAACTTAAAGAAGACCATGACAAGCAGATTCAAAAATT
GACATTTGAAAACAAGATCAAATTTCTTGAATCTGAGAATAACCACCAAA
TGAAAATCATGCAGCTCGAAAAGAACAATCAATCGTTGACTCATGAGCTG
GAGCTCTTGAAGTTGAAGACCTCGCATGAACAAGAGGCTAAGAAAGACGT
GGTCGACCGTGAAATGGAGAGAGAAATGCTGAAACAGCAAAATGAATTTC
AAAACAAACTTACTGAAAAAGACAAAGAACTAGCTGGGAAAGACAAGGAA
ATGATTGTCAAGGAAAGCGAGTTCAAACTGAAAATGAAAGAATTGGAGAT
TGTCCATGCAAACCAACTGACTGCAAAACAAAACGAATGTGAGCTGAAAT
TGATTCAAAAAGTTCAGGAAATGATTGCCAAAGAAAGTGAGTTTAAATTG
AAATTGGCTGAAGTGGAGAATGCGAATAAGCTGAAAATTGCAGAACATGA
AAACGTAAACAAATTGAAACTTCTTGAAAAAGAAAAAGGAATGGCAGACA
AAGTGAACGAGTTGAATTTGAAAATTAATGAGTTGGAAACTCTACACAAT
AAAACAAAAATGGAAGACGTGGCTTCAGGTGTGAACATCATCCAGAAGAA
GCAAGATGGAGCCGAAGCAAGAGATATTACCAGGACTGAGAAGTTGACTT
GGGGAGCTGATAAGTTCTTTGAAAGTAAACCAGGCGAGCTCAATTTGTTT
GCATCGTATCAAGATTGGTATGAAGAAATCAGTTCGTTGCTACACGATGG
AGAGGAAGAGATTGTT Coding sequence (CDS) from alignment at sc0000119_pilon:6156..13771- >XLOC_038532 ID=XLOC_038532|Name=XLOC_038532|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1466bp|location=Sequence derived from alignment at sc0000119_pilon:6156..13771- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATTCCGCACATTGTGATGATCGCAATTTGGCACACAGTGCTACTGG
TAGAAATGTCACCAACAAAGTTGACAGCGTCGTTGAGACAGCGAAACTTA
AAGAAGACCATGACAAGCAGATTCAAAAATTGACATTGGAAAACAAGATC
AAGTTTCTTGAATCTGAAAATAACCATCGAATGAAAATCATGCAGCTTGA
AAAGGACAATCAATCGTTAACTCATGAGCTGGAACTCTTGAAGTTGAAGA
CCTCGCATGAACAAGAGGCTAAGAAAGTCGTCGTTGATCGTGAAATGGAG
AAAAAAAATGCTGAAACAGCAAAATGAATTCCAAAACAAACTTACTGAAA
AAGACAAGGAGCTAGCTGGAAAAGACAAGGAACTAGCTGAAAAAGACAAG
GATATGGCGGCAAAAGAAAATGAGTTTAAATTGAAATTGGCTGAAGTGGA
GAACGCGAATAAGCTGAAAATTGCAGAACATGAAAACGTAAACAAATTGA
AACTTCTTGAAAAAGAAAAAGAAATGGCAGACAAAGTGAACGAGTTGAAT
TTGAAAATCAAAATGGATTCCGCACATTGTGATGATCGCAATTTGGCACA
CAGTGCTACTGGTAGAAATGTCACCAACAAAGTTGACAGCGTCGTTGAGA
CAGCGAAACTTAAAGAAGACCATGACAAGCAGATTCAAAAATTGACATTG
GAAAACAAGATCAAGTTTCTTGAATCTGAAAATAACCATCGAATGAAAAT
CATGCAGCTTGAAAAGGACAATCAATCGTTAACTCATGAGCTGGAACTCT
TGAAGTTGAAGACCTCGCATGAACAAGAGGCTAAGAAAGTCGTCGTTGAT
CGTGAAATGGAGAAAAAAAATGCTGAAACAGCAAAATGAATTCCAAAACA
AACTTACTGAAAAAGACAAGGAGCTAGCTGGAAAAGACAAGGAACTAGCT
GAAAAAGACAAGGATATGGCGGCAAAAGAAAATGAGTTTAAATTGAAATT
GGCTGAAGTGGAGAACGCGAATAAGCTGAAAATTGCAGAACATGAAAACG
TAAACAAATTGAAACTTCTTGAAAAAGAAAAAGAAATGGCAGACAAAGTG
AACGAGTTGAATTTGAAAATCAAAAAGAAGCAAGATGGAGCCGAAGCAAG
AGATATTACCAGGACTGAGAAGTTGACTTGGGGAGCTGATAAGTTCTTTG
AAAGTAAACCAGGCGAGCTCAATTTGTTTGCATCGTATCAAGATTGGTAT
GAAGAAATCAGTTCGTTGCTACACGATGGAGAGGAAGAGATTGTTAAGAA
GCAAGATGGAGCCGAAGCAAGAGATATTACCAGGACTGAGAAGTTGACTT
GGGGAGCTGATAAGTTCTTTGAAAGTAAACCAGGCGAGCTCAATTTGTTT
GCATCGTATCAAGATTGGTATGAAGAAATCAGTTCGTTGCTACACGATGG
AGAGGAAGAGATTGTT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000119_pilon | genome | sc0000119_pilon:6156..13771 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 565-735:172 |
| Aaloc | 559-564:7061 |
| Aaloc | 301-555:7316 |
| Aaloc | 1-300:7617 |
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