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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000010_pilon:866371..871301- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037418 ID=XLOC_037418|Name=XLOC_037418|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4931bp|location=Sequence derived from alignment at sc0000010_pilon:866371..871301- (Clytia hemisphaerica_ch_hm2_pilon)
GATGTGAATCAGTACCCTTTGATAAATCAGCAGTCACCAACTCAAGAAAA
CGAAAATCAACAACCAGTAGACTTGGAAATCCACATTGATCTGGACAAGG
TGACAATGGTTTGTTTTTAACAGTGGTTAATGATAATTGCGGTTTGGTAG
TTGATTCAGAGAATTTGACAAATGTCAATCCTTCTTTAACTTATAATTCC
CGGACGAGAGGAAATACTTAAATACTTAAATTTTTAGGATTCAAAATGAA
TCTAAGTCTATCTTAACCCTTAGCCAGCGCACCGCTTTTTGAAAAGTTGA
TTTATTTTGCAATTTTTTTCTTTGAAATCAAAAAACTTCAAAATGGGCTA
AACGCTTGTAGCTTGAGAGTTAGACAATGGTTTTGGTACCATTGAAAAGC
TATTTTCATACTCTTTCTAAAAGCATTCGGTTTATGCCCCTTTAAAGCAA
GTAGTCAGGAGCTATGACCAAAAGACGCTGTATCAGTAAAACGTCCTTTT
CAAACCGTATATCTACGTTATCCGCCGTCTAAGGGTTAAGAGAACTAATT
TTCGCGCTTGACACCCACTTTAGGCTAAATTCTTTGATTTTCCTACCGGG
ATATTTGAAATTTTAGAAAAAATTACATTTTGAGGAACCTATATCACTTA
AGGAGGCCTAAGGAGGCCTCCAGAGGCCTAATTTTGCATTCATCCATTGT
TTGGAAATCCTTTATCGGAGACTATCAAAATTCTCATCTTTCATTCCCCA
TTTTTTAACATAAACCCAGGATGTCTACTGGACCTCGAAATAATTCTCAT
CCTTCATTCCCCATATTTTAATATAAACCAGGATGTCTGATGTCTGTCAA
ACATTTCAAATCTTGAAATTCCAACACCCTGTAGCGTGTTGTACACATTA
TAAATAGACTGGTGTAATATATTTAACTATTTTCCCTTTCAGGACTTATC
AAATAGAGATGATGAAAGTGACGTTTTCTTGCCAGAAATCATATCCGAAT
CGGTACGTTCCCATTATAAATCGAAAAATTTAGTCAAACCAATCTTCATT
GTTGGGAAATTCGTCCATTTAGGAACCAAATCTTTTTCTCACTAAATATC
CGCGTGTTCTTATTATAGAACAATGTAATCATGGTTTCAGCCCCCCCCTC
TCCCAACGAAAGAGGTCCCCTTGAAAATTTGCCTTGAGCTAGGTACCCCC
AGTGACTTGAAATTTCTTTTGAATTCCAAGTTTCTGTTCTTTTGTTATCT
CTAAAATCTTCAAGATACTGTACGCTTTTCCAGTGTGAGAAGCGCTCACA
TGTATATACCCCTTTAAAAAAACTTTTTATTACGCTATGGAAAACTACGC
TTCATTCAAAACAAAACAAACAAAACAAACAAAAATTTGAGCAGAGTATA
TGAAAATAGAAAAGTGGAATAAAGAATTTCCTAATTTGGAAAATATAGAG
AAAGCCCACTGAGTTTCTATCAGATTAGTCACAGGTACCCCCCATATAAT
TGCTATACTGTAGCCCCCTCCTAGAGATTGGACCTCGGTCACCTTTAGAA
ACCTGGGGGGGGGCTGAAACCGTGGTATTGCACCGCAAGAATCGTGTCCA
TTGAACAACGTTTTCTGGTTATATGGTAGATTATGTCCTCATTTTTTAAG
AATCACCCGAAGGAAAAATCGTCCAAAGACGAACGGAATTGCAATCGAAT
AGAAGATAGTGATGATGAAGGTGGACATTGTGATGAAATACAACAAATAC
TCAAAATGGACAAAGCTGACATTGGGAATAAAAGTAAGTAGTCACCATTT
TGATTTGAAAGCTCTGTTCAAAAATCATTTCGCCAAAGTTAGGTAATGAT
ATATTGAATTTGTAAAAAAAAATCTCTTCTACTATACTAATGGTACTTCC
AGAACACTATAATAATATGCCTTTCTGTGTTACAGATGATATAGAAAATG
CTTCTCGGAGATCATCAAGGAAGAATAAAAAAATCAGCTACGAAGGCATG
GATTCGGACAATGCCTTGGAACCTTTAGGCGATCCTGACTTCATACGTAA
GCTACGCAAATTTTACTACCATTGTTATACAGTAATGTTTTCAAAATTAA
AGCCGATGTTTTTTTAAGGAGTGGTTCGGTTAAAAAATCATTTCTTTCTT
AAGTATCCCCTCGTCGGATTCTCATTTTCAAAAGAGGAACAAAAATATAT
ACATTTAATAAAGCGAAAGTTATATAGCAAGTCTTGTTCATTTAAAACAA
AGTTTTAAAAATAATAAGAAATGGCTGAAAGAGCTCCAAGCCAAAATAAT
ATTACATCGTAGATGTTTGAAAAGTTTAGACTACCCAGTCTACAAGGCTC
TACTGGGGTTTTAATGTAAATCACTGTATAAATTGGCTTTTCTTCTAAAA
TAAGCTTTATTCGCATAAGGCCCTCGTGAAGTCACATACATTAAAGTTGC
TCAAAATAGCAGGGTTCTTTCTGTAAAAAATGAGAATCGATTGGCTAAAA
TAAAATTTGAGAGCACTCGTGTTTTCAGTAGTAAAGTTTAAAAAAAATTA
ATTGAGTTAGAAACGCTGGACTCCTCATCATAAGATATTAAAAAAAACAT
TTGTTGGATTTTTCATCTTTTATCTACCTTAAGGGAGCTAATTTTTGCGG
TCCGAACCAAACTGGTTCTTCAGGATTTCCAGAATTTCCCAAAGCTGTGT
ATTTAATGGCTTAAAAGCTACCAATGTTCAGAATTTAGATAAAAAAACTT
TTGAGTGGTGCGGATGTGAAAACTACTTATTAGCGAAGTTTCGCAAGAGG
CTATTTAGGATTTGAAATGTACCACTTGAACCTGTACATAACCCGACCGA
CCAAAATCTTCATGTGTATAATTCTTAATGTACAGGAAGTCGTACATTTC
AAGTCACTAAGGTTGGGCTGAACCCTTTACAGTCTGGTTGCTTATATAAA
ATGTGTATACTAAAAATGGCGATTTAAAAATATCAGTGGGCGTTACAGGA
GAACTTTGCAACAGGGTATCACCATTTTCGAGCTTGCTTCTTATATAAAA
TATTTAGTAGATTATTCTAAATCCGTTATAGCCTCATTTGAAGATGACGA
AGACAAAGATGACAAAAATGAAAGAAGAGCAAATGAAGCATTGGAAAGAG
CAATTGCAAGAATTGATGTAAGTTGAGAATCTCGATTAGTTTTGGGATGG
ATTCCAGAAAGAACACATTCAATACAACGACCTACAGAGTTTTTTTTTTG
CTGAATATAGCAGTTTAAAAGATTCCGTATGGATTTAATTTCGATCTCAG
GTATTTTAGACCCTCTCTCCTCCCCCTTGTTTGCTTGGATAATGTATATG
ACGTCATAAAACACTAGCTGTTTGTCTCACCCCCTTGAGCGAATGCTCCC
TAAGCAACTTAAAAAAATTCAGCTCATTTCTGTCACAGGGCTTGTGTTGC
TCAGCCAACTTGCAAATTATTTTGGTCATCTTCTTCAGGGTCAAACGTCA
GTCAATACGGAAAATATTGACCTTATCCTAACGAATATGTAAAATTAGTC
ATTACCCAATAATTTTTTTTTTAATTATTAGGCTTTGTGTGCGCCGTTTG
AACAATCCTCTCCTGTACGAGAAATCAGTATTTTAAACGATTCCGCCATC
GGTTTGGGTGACAGTGTTGGTCAGATAATTGACACCGACAATGAATCTGA
CGAAAACGATAATGTCATCTTAGAAATGGAACAGCCGCAAGAGACAGACC
AGCCGCAAGAGACAGACCAGCCGCAAGAGACAGACCAGCCGCAAGAGACA
GAACAGCCGCAAGAGACAGAACAGCCGCAAGAGACAGAACAGCCGCAAGA
GACAGAACAGCCTAAGACAAAACAGCCGAAAATTCATCGGCCCTGTCCAT
ACTGTAGCGTGGGGCAGAGCGACTTAACTCGGCATCTAAAGCTAAAGCAC
AAGAACGAAACAGCTGTCATTAGTGCAATGAAAAAAGGAAGGGTTGAACG
CAATAAAGCCTTTGACTTACTGAAGAAAGAAGGTATTTTCCAGCATAACC
AAAAGCAAATGGAAAAGGAAAGCCCAACCTTTATGCGGGAAAGAAAGACA
AAGAACGACGAAAAGGTGAAAGTTGAGGTTTTAGTTGTTTGCGCCGCCTG
TCATGGAACCTATTCAAAGACATACAAAGCGAGACATCGACTGGAGTGCG
GGAACACAAGTGGGCAGGTAATGATCCCAATGATTCCTGCAAAAGATCTT
GTCATCACCCATTATGCGGATGACTTCAAGAAGGTGTTGGATAAAATGAA
GATAGACGACGTTTCGTCTCTGGCCAAAACCGATCCATATATCATGGTGG
TTGGAGCAAGAATCTACAACGGAAACAAATGTAAAGACGAGAAAATACAC
GAAACTGAAAAACGCGTCCGCTCAGCAATGCGTTTGCTGAGCCGTTTGTT
AATTCAATTCAGAATCTCGTTTGGCGAAGACAAAAACTTATCTTTCTTGT
ACAACAAAAATAATCTCAGTCACTTGCGCTTCGCAATCGAGGTGCTGTCC
GAAGGTGAAGCAGAAATGAAGTCTGGGCTGAAGGTACAGATCCAAAACGT
GATAAAGCAAGCAGGAAAAATCTTAGAAGCGCATTTTTTAGTAGAAGGGG
AGAGCCAACTTCCCGAAGATGTGTGTGACTTCATCAAGGTTTTTCATCTT
GTTGAAAATGAAATCTTCAACGGAGCCCTCTATAAAATCAAACAAAAACG
TAATAAATCCACAAGGAAGCCCGCCAATCTTCCTGACGAAGAGCTGGTGC
AAGAACTCAGGAAATACTTACTAAAGACCATGCTCAAAGAAAATTTTATA
TTCAAGTCTCCTGAGGATGTTTTTGTGGAAGTTCGAGACTCTGCGTGTGC
CAGACTGACCATGTTCAATGGGCGTCGAGGT Coding sequence (CDS) from alignment at sc0000010_pilon:866371..871301- >XLOC_037418 ID=XLOC_037418|Name=XLOC_037418|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3678bp|location=Sequence derived from alignment at sc0000010_pilon:866371..871301- (Clytia hemisphaerica_ch_hm2_pilon)
GATGTGAATCAGTACCCTTTGATAAATCAGCAGTCACCAACTCAAGAAAA
CGAAAATCAACAACCAGTAGACTTGGAAATCCACATTGATCTGGACAAGG
ATGTGAATCAGTACCCTTTGATAAATCAGCAGTCACCAACTCAAGAAAAC
GAAAATCAACAACCAGTAGACTTGGAAATCCACATTGATCTGGACAAGGA
CTTATCAAATAGAGATGATGAAAGTGACGTTTTCTTGCCAGAAATCATAT
CCGAATCGGACTTATCAAATAGAGATGATGAAAGTGACGTTTTCTTGCCA
GAAATCATATCCGAATCGAATCACCCGAAGGAAAAATCGTCCAAAGACGA
ACGGAATTGCAATCGAATAGAAGATAGTGATGATGAAGGTGGACATTGTG
ATGAAATACAACAAATACTCAAAATGGACAAAGCTGACATTGGGAATAAA
AAATCACCCGAAGGAAAAATCGTCCAAAGACGAACGGAATTGCAATCGAA
TAGAAGATAGTGATGATGAAGGTGGACATTGTGATGAAATACAACAAATA
CTCAAAATGGACAAAGCTGACATTGGGAATAAAAATGATATAGAAAATGC
TTCTCGGAGATCATCAAGGAAGAATAAAAAAATCAGCTACGAAGGCATGG
ATTCGGACAATGCCTTGGAACCTTTAGGCGATCCTGACTTCATACATGAT
ATAGAAAATGCTTCTCGGAGATCATCAAGGAAGAATAAAAAAATCAGCTA
CGAAGGCATGGATTCGGACAATGCCTTGGAACCTTTAGGCGATCCTGACT
TCATACCCTCATTTGAAGATGACGAAGACAAAGATGACAAAAATGAAAGA
AGAGCAAATGAAGCATTGGAAAGAGCAATTGCAAGAATTGATCCTCATTT
GAAGATGACGAAGACAAAGATGACAAAAATGAAAGAAGAGCAAATGAAGC
ATTGGAAAGAGCAATTGCAAGAATTGATGCTTTGTGTGCGCCGTTTGAAC
AATCCTCTCCTGTACGAGAAATCAGTATTTTAAACGATTCCGCCATCGGT
TTGGGTGACAGTGTTGGTCAGATAATTGACACCGACAATGAATCTGACGA
AAACGATAATGTCATCTTAGAAATGGAACAGCCGCAAGAGACAGACCAGC
CGCAAGAGACAGACCAGCCGCAAGAGACAGACCAGCCGCAAGAGACAGAA
CAGCCGCAAGAGACAGAACAGCCGCAAGAGACAGAACAGCCGCAAGAGAC
AGAACAGCCTAAGACAAAACAGCCGAAAATTCATCGGCCCTGTCCATACT
GTAGCGTGGGGCAGAGCGACTTAACTCGGCATCTAAAGCTAAAGCACAAG
AACGAAACAGCTGTCATTAGTGCAATGAAAAAAGGAAGGGTTGAACGCAA
TAAAGCCTTTGACTTACTGAAGAAAGAAGGTATTTTCCAGCATAACCAAA
AGCAAATGGAAAAGGAAAGCCCAACCTTTATGCGGGAAAGAAAGACAAAG
AACGACGAAAAGGTGAAAGTTGAGGTTTTAGTTGTTTGCGCCGCCTGTCA
TGGAACCTATTCAAAGACATACAAAGCGAGACATCGACTGGAGTGCGGGA
ACACAAGTGGGCAGGTAATGATCCCAATGATTCCTGCAAAAGATCTTGTC
ATCACCCATTATGCGGATGACTTCAAGAAGGTGTTGGATAAAATGAAGAT
AGACGACGTTTCGTCTCTGGCCAAAACCGATCCATATATCATGGTGGTTG
GAGCAAGAATCTACAACGGAAACAAATGTAAAGACGAGAAAATACACGAA
ACTGAAAAACGCGTCCGCTCAGCAATGCGTTTGCTGAGCCGTTTGTTAAT
TCAATTCAGAATCTCGTTTGGCGAAGACAAAAACTTATCTTTCTTGTACA
ACAAAAATAATCTCAGTCACTTGCGCTTCGCAATCGAGGTGCTGTCCGAA
GGTGAAGCAGAAATGAAGTCTGGGCTGAAGGTACAGATCCAAAACGTGAT
AAAGCAAGCAGGAAAAATCTTAGAAGCGCATTTTTTAGTAGAAGGGGAGA
GCCAACTTCCCGAAGATGTGTGTGACTTCATCAAGGTTTTTCATCTTGTT
GAAAATGAAATCTTCAACGGAGCCCTCTATAAAATCAAACAAAAACGTAA
TAAATCCACAAGGAAGCCCGCCAATCTTCCTGACGAAGAGCTGGTGCAAG
AACTCAGGAAATACTTACTAAAGACCATGCTCAAAGAAAATTTTATATTC
AAGTCTCCTGAGGATGTTTTTGTGGAAGTTCGAGACTCTGCGTGTGCCAG
ACTGACCATGTTCAATGGGCGTCGAGGTGCTTTGTGTGCGCCGTTTGAAC
AATCCTCTCCTGTACGAGAAATCAGTATTTTAAACGATTCCGCCATCGGT
TTGGGTGACAGTGTTGGTCAGATAATTGACACCGACAATGAATCTGACGA
AAACGATAATGTCATCTTAGAAATGGAACAGCCGCAAGAGACAGACCAGC
CGCAAGAGACAGACCAGCCGCAAGAGACAGACCAGCCGCAAGAGACAGAA
CAGCCGCAAGAGACAGAACAGCCGCAAGAGACAGAACAGCCGCAAGAGAC
AGAACAGCCTAAGACAAAACAGCCGAAAATTCATCGGCCCTGTCCATACT
GTAGCGTGGGGCAGAGCGACTTAACTCGGCATCTAAAGCTAAAGCACAAG
AACGAAACAGCTGTCATTAGTGCAATGAAAAAAGGAAGGGTTGAACGCAA
TAAAGCCTTTGACTTACTGAAGAAAGAAGGTATTTTCCAGCATAACCAAA
AGCAAATGGAAAAGGAAAGCCCAACCTTTATGCGGGAAAGAAAGACAAAG
AACGACGAAAAGGTGAAAGTTGAGGTTTTAGTTGTTTGCGCCGCCTGTCA
TGGAACCTATTCAAAGACATACAAAGCGAGACATCGACTGGAGTGCGGGA
ACACAAGTGGGCAGGTAATGATCCCAATGATTCCTGCAAAAGATCTTGTC
ATCACCCATTATGCGGATGACTTCAAGAAGGTGTTGGATAAAATGAAGAT
AGACGACGTTTCGTCTCTGGCCAAAACCGATCCATATATCATGGTGGTTG
GAGCAAGAATCTACAACGGAAACAAATGTAAAGACGAGAAAATACACGAA
ACTGAAAAACGCGTCCGCTCAGCAATGCGTTTGCTGAGCCGTTTGTTAAT
TCAATTCAGAATCTCGTTTGGCGAAGACAAAAACTTATCTTTCTTGTACA
ACAAAAATAATCTCAGTCACTTGCGCTTCGCAATCGAGGTGCTGTCCGAA
GGTGAAGCAGAAATGAAGTCTGGGCTGAAGGTACAGATCCAAAACGTGAT
AAAGCAAGCAGGAAAAATCTTAGAAGCGCATTTTTTAGTAGAAGGGGAGA
GCCAACTTCCCGAAGATGTGTGTGACTTCATCAAGGTTTTTCATCTTGTT
GAAAATGAAATCTTCAACGGAGCCCTCTATAAAATCAAACAAAAACGTAA
TAAATCCACAAGGAAGCCCGCCAATCTTCCTGACGAAGAGCTGGTGCAAG
AACTCAGGAAATACTTACTAAAGACCATGCTCAAAGAAAATTTTATATTC
AAGTCTCCTGAGGATGTTTTTGTGGAAGTTCGAGACTCTGCGTGTGCCAG
ACTGACCATGTTCAATGGGCGTCGAGGT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000010_pilon | genome | sc0000010_pilon:866371..871301 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 490-1839:1351 |
| Aaloc | 406-489:1849 |
| Aaloc | 295-402:2995 |
| Aaloc | 160-291:3282 |
| Aaloc | 100-159:3990 |
| Aaloc | 1-99:4932 |
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