XLOC_038492 (mRNA) -

Overview
NameXLOC_038492
Unique NameXLOC_038492
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000044_pilon:1894074..1895594-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038492 ID=XLOC_038492|Name=XLOC_038492|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1521bp|location=Sequence derived from alignment at sc0000044_pilon:1894074..1895594- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATTTGACGATCAGAATTTTATCAGTATCCAGCCTCGTTTTTAACAC GATCTGCGCATGCGCCCATTGTTATTGTCTTGCATTACTTTACCAAAGTC GACGTCTTACTCGCTTCACAAACCAACGAATCCTGATCGCCAACATCTCT ATCTGCGAAATCATCTTCTGCATAGCTCAAATACGAATCAACACTTACGA CCTCTTAAAAGAGACTAGTAGTCAGGGCTATCTCATTTTTGAGCGATTTA TACGTTTTTCAGCTTTGATAGTCTTCTATCTGGCATTACATCATATTACA ATGGATCGCTTCATGGAGGTGTATTATCATCTCCGGTATACGGTAATTGC CACTAAAAGCCGGATAATCCGTATACTATTGGTGTATTGGGTAGGCAGCA TAACCGCCGGAATTGTTCTTATAACAGCTACTTTAACGATCGAAGAATTA ACGCTGGATAAGACCACCGAATATGTCTTTTATTTCTCACTTTTCGCTGA TTTTACAGTTTTAATTAATGCCGCTTTTACGTACACTTACCTGTATCGAA AGTTCCGTAAGTTGAATCGTAAAGCGCACTCGCAGCGGACAAAAAAGAAT CTCAGGCGGACGAATAGTTTAAAAACTCCAGTTTTCGCCGTTCCACTGAT TATCGTATCAACTTATATTTGTTTTGAGACGATTGGTATGTGTTTGTCAG TGTATGGATACTTATTCGAATTCGATAGGTTTGAGTTGTACCGAAAAACA GCATTAGTTTTATTTTGTATGAGCTATTTGTCTGATGCTTTCGCTTATAT TTTTATACAACCGGTAATTCGCGATACCATTAAAACTCATTATCGTACGG TTAAATCGAAAGTCATTCGAAGCAGTGCGAAAAGTACAACACGATCACAG ACTGGGATTGATAATCTTGCCTGTGTTTCGAATGCCAATACAATAGGACG AACAGCCAATCAAATTGAAGTATACCTATACCAAAATGTGCCAACAGACC ATAAAATCTCTGATCAAACGAAAACTCAGCAATGTATACTAGATTCGAAT AACAACAAACCTAGAGAACAAGAAATAGAAAGAGCACCGACAGACCATGC TATGCATTCTACCTGTAACAACACACATTCAAGTATTTACCCTACTCTTG ACGCATTCTCTACAGGACCTCAGATAGTTGGAATAAATAATCTTGGTTCA AGTACAAATAGTCTAGAAAATTCAAGTTGTGTTACTTGTAAATCACCCTA TTTAAATCAAACGCGGATAGCATCAACGATTCAGTCTTCCACATCAAATT GTACTACTCCAGCAATGGGCATCAAAAGAAGTGATAAAAATGAAAACTTC CATGTAAACAAACACCAAAGCATTTCTAACCTAGATGATAACCACTTATG TGAGAGCAGAATGGCCTTAGGGGACTGTACCCCAAAATCTGATAGTATTC TTAAAATCGATGTCAGGGAAAACGGACAAAAACACAAGATGAAGCTGCAT GTTGATGCAGATTTTGATTAA

Coding sequence (CDS) from alignment at sc0000044_pilon:1894074..1895594-

>XLOC_038492 ID=XLOC_038492|Name=XLOC_038492|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3042bp|location=Sequence derived from alignment at sc0000044_pilon:1894074..1895594- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATTTGACGATCAGAATTTTATCAGTATCCAGCCTCGTTTTTAACAC
GATCTGCGCATGCGCCCATTGTTATTGTCTTGCATTACTTTACCAAAGTC
GACGTCTTACTCGCTTCACAAACCAACGAATCCTGATCGCCAACATCTCT
ATCTGCGAAATCATCTTCTGCATAGCTCAAATACGAATCAACACTTACGA
CCTCTTAAAAGAGACTAGTAGTCAGGGCTATCTCATTTTTGAGCGATTTA
TACGTTTTTCAGCTTTGATAGTCTTCTATCTGGCATTACATCATATTACA
ATGGATCGCTTCATGGAGGTGTATTATCATCTCCGGTATACGGTAATTGC
CACTAAAAGCCGGATAATCCGTATACTATTGGTGTATTGGGTAGGCAGCA
TAACCGCCGGAATTGTTCTTATAACAGCTACTTTAACGATCGAAGAATTA
ACGCTGGATAAGACCACCGAATATGTCTTTTATTTCTCACTTTTCGCTGA
TTTTACAGTTTTAATTAATGCCGCTTTTACGTACACTTACCTGTATCGAA
AGTTCCGTAAGTTGAATCGTAAAGCGCACTCGCAGCGGACAAAAAAGAAT
CTCAGGCGGACGAATAGTTTAAAAACTCCAGTTTTCGCCGTTCCACTGAT
TATCGTATCAACTTATATTTGTTTTGAGACGATTGGTATGTGTTTGTCAG
TGTATGGATACTTATTCGAATTCGATAGGTTTGAGTTGTACCGAAAAACA
GCATTAGTTTTATTTTGTATGAGCTATTTGTCTGATGCTTTCGCTTATAT
TTTTATACAACCGGTAATTCGCGATACCATTAAAACTCATTATCGTACGG
TTAAATCGAAAGTCATTCGAAGCAGTGCGAAAAGTACAACACGATCACAG
ACTGGGATTGATAATCTTGCCTGTGTTTCGAATGCCAATACAATAGGACG
AACAGCCAATCAAATTGAAGTATACCTATACCAAAATGTGCCAACAGACC
ATAAAATCTCTGATCAAACGAAAACTCAGCAATGTATACTAGATTCGAAT
AACAACAAACCTAGAGAACAAGAAATAGAAAGAGCACCGACAGACCATGC
TATGCATTCTACCTGTAACAACACACATTCAAGTATTTACCCTACTCTTG
ACGCATTCTCTACAGGACCTCAGATAGTTGGAATAAATAATCTTGGTTCA
AGTACAAATAGTCTAGAAAATTCAAGTTGTGTTACTTGTAAATCACCCTA
TTTAAATCAAACGCGGATAGCATCAACGATTCAGTCTTCCACATCAAATT
GTACTACTCCAGCAATGGGCATCAAAAGAAGTGATAAAAATGAAAACTTC
CATGTAAACAAACACCAAAGCATTTCTAACCTAGATGATAACCACTTATG
TGAGAGCAGAATGGCCTTAGGGGACTGTACCCCAAAATCTGATAGTATTC
TTAAAATCGATGTCAGGGAAAACGGACAAAAACACAAGATGAAGCTGCAT
GTTGATGCAGATTTTGATTAAATGGATTTGACGATCAGAATTTTATCAGT
ATCCAGCCTCGTTTTTAACACGATCTGCGCATGCGCCCATTGTTATTGTC
TTGCATTACTTTACCAAAGTCGACGTCTTACTCGCTTCACAAACCAACGA
ATCCTGATCGCCAACATCTCTATCTGCGAAATCATCTTCTGCATAGCTCA
AATACGAATCAACACTTACGACCTCTTAAAAGAGACTAGTAGTCAGGGCT
ATCTCATTTTTGAGCGATTTATACGTTTTTCAGCTTTGATAGTCTTCTAT
CTGGCATTACATCATATTACAATGGATCGCTTCATGGAGGTGTATTATCA
TCTCCGGTATACGGTAATTGCCACTAAAAGCCGGATAATCCGTATACTAT
TGGTGTATTGGGTAGGCAGCATAACCGCCGGAATTGTTCTTATAACAGCT
ACTTTAACGATCGAAGAATTAACGCTGGATAAGACCACCGAATATGTCTT
TTATTTCTCACTTTTCGCTGATTTTACAGTTTTAATTAATGCCGCTTTTA
CGTACACTTACCTGTATCGAAAGTTCCGTAAGTTGAATCGTAAAGCGCAC
TCGCAGCGGACAAAAAAGAATCTCAGGCGGACGAATAGTTTAAAAACTCC
AGTTTTCGCCGTTCCACTGATTATCGTATCAACTTATATTTGTTTTGAGA
CGATTGGTATGTGTTTGTCAGTGTATGGATACTTATTCGAATTCGATAGG
TTTGAGTTGTACCGAAAAACAGCATTAGTTTTATTTTGTATGAGCTATTT
GTCTGATGCTTTCGCTTATATTTTTATACAACCGGTAATTCGCGATACCA
TTAAAACTCATTATCGTACGGTTAAATCGAAAGTCATTCGAAGCAGTGCG
AAAAGTACAACACGATCACAGACTGGGATTGATAATCTTGCCTGTGTTTC
GAATGCCAATACAATAGGACGAACAGCCAATCAAATTGAAGTATACCTAT
ACCAAAATGTGCCAACAGACCATAAAATCTCTGATCAAACGAAAACTCAG
CAATGTATACTAGATTCGAATAACAACAAACCTAGAGAACAAGAAATAGA
AAGAGCACCGACAGACCATGCTATGCATTCTACCTGTAACAACACACATT
CAAGTATTTACCCTACTCTTGACGCATTCTCTACAGGACCTCAGATAGTT
GGAATAAATAATCTTGGTTCAAGTACAAATAGTCTAGAAAATTCAAGTTG
TGTTACTTGTAAATCACCCTATTTAAATCAAACGCGGATAGCATCAACGA
TTCAGTCTTCCACATCAAATTGTACTACTCCAGCAATGGGCATCAAAAGA
AGTGATAAAAATGAAAACTTCCATGTAAACAAACACCAAAGCATTTCTAA
CCTAGATGATAACCACTTATGTGAGAGCAGAATGGCCTTAGGGGACTGTA
CCCCAAAATCTGATAGTATTCTTAAAATCGATGTCAGGGAAAACGGACAA
AAACACAAGATGAAGCTGCATGTTGATGCAGATTTTGATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_038492XLOC_038492-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000044_pilongenomesc0000044_pilon:1894074..1895594 -
Properties
Property NameValue
Aaloc1-1521:1522