XLOC_021401 (gene) - C. hemisphaerica

Overview
NameXLOC_021401
Unique NameXLOC_021401
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001448:3980..9025+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_021401 ID=XLOC_021401|Name=XLOC_021401|organism=Clytia hemisphaerica|type=gene|length=5046bp|location=Sequence derived from alignment at sc0001448:3980..9025+ (Clytia hemisphaerica)
CAGGGGATGAGTTATAATAGGAGACGTGTATTAGTTACCGAGAGGTAAAT GGCCCCTAAATGCGGGTTTAACCTTCTTAAGGTATCTTGAAAACCAAAAC CAGACCAGTACTGGTTTTAAGAATGCTTAAAGAGGAGGTATATGCATCAA AAAGAGCTCaccattaatttttttccgCTGCTGCCTTTCTATTGCCTCTA GCGTTTCCGTTTTTTCGTCGATCTTGATGACGACAGTTGTTACTGAAAGA TGAAATAATATTAATTGCTCCAAAGTCATAATAAAATCCTTCTTTTTCCA ATATAAGGCTTTGATCTTAAAAAGATAACCAATTCCCAAGTCAATAGATC CATCCATCATGGCAGACTTTTAGGAATTAATGATTTTTGCCCGTTATTAA AAGACAACCTGAAAAATGTGGAGCTTATTTTGGACTGAAGCTGGTCGATC TTTGCCTCCAGGGGCTGAAGACCGTATACGTTCTCCGTCTGGGTGCTCAC ATCCATCAGGcgtatttttttggtaaaaaaaccagcaatttttcttttgg ttttaaTAATACTATTACTAAAACAAAAGATAAAACGGTTAAAGCAattt aaaagaatcaaaaacGAATAAATTGACCACAGAAACTTAAATAACATTTA AGTTGAATCAATCAAGTAAGGGTTATGGTTTCAGAAGGTCATGTGATATC TATCATCATTAACCGACCCTTACGAGGGATTATCATCTTTTAAAAACAAT CAAGAATATAAACTTTAGTACGACTTTAAccattttgtttacaaatttca atAGGGGAATGTTAATCTCCACAGCGTGGGGTCTCCGATGTATCGGGTAT CATGTCCAATTCAAAATGAATGTCAACCTCCACAGCGTGGAGTCTCCGAT GTATCGGGTATCATGTCCAATTCAAAAGGGGTGGCGATCTCCACAGCGTG GGGTCTCCGATGAATGGGGTATTTATTAGACCATAAATCTCTAGTGTGGA GTTTTGAATCGAGTCAACATTTAATAATGATATAATATTAGAGTATAGAA CAGCTTGTAAAGATGAATTCTAAAAGATGATAATCCCTCTTTCTTAAAAT CCAAACTATCAGGAAATAATTAACAGCCAttttattcttttgaaaaaatc aataatGGCTTTTTTAACTTAAGAAAACTCAGGACATAGCAAATCACTAT AGTATAAATCTCCCACCCCCAGCCTTGAAAAGTATAAAAACATAACAATA AGAAATTGTAAATTCAATCAAAGATAACCCAACACAACGATAATCTTGAA CACTAGTCAACANCCCCCCCCCCCAgccttgaaaaatataaaaacataac aatAAGAAATTGTAAATTCAATCAGAGATAACCCAACCCAACTGAACAGA ACACAACGATAATCTTGAACACTAttcaacattttcataatttttgtaaa ttctttttgaaactttgaaattattggAAGTTATTCGAAAtatcaacaac aaaacaaaaagcacGACCTTAGAACAGCAAATCTAAAGATCATTAATTTA ATCACTTTCTTCAATAAAACATCGGAGGCCATCATTGACAAAGCGATCGA ATTCACATAATAATTCTTTGTAAATATTCAAATCACTGTAACGACCAAAG GTTTTAAGTGTCTCATCACTCAAagctttcaatcttttttcttcCTCCCT TCTTTGAGGCATCCATGGATGTTTATTGATGTACTCTAATCGATCAAAGG GAATTTTGTTTACTAGAGCAACATTTTCTAATTTGGATGCTCTACTAAGG GCAGTATAAGTAATGCCAAGGTTAAGCTTTTCCATGAAAATCTCTTGATT GAGTTTTATCCTTATAGGAGTACATTGCTCATTTGGGCCTATGGTCATAC CTTGACTTTTTGAGATTGGAATACAATAACCAGGCATCAACGGCACACCG CGCTTCATTGACAGGTATAGGAACCCATGTGGGGTGTTCTGGAATCCAAC TTGGGCCTTTATATCGTGGGAAATCAACAACAACAGCTTCAGGAAATGAT GGAGGTCCCTCACCCTCAGCATACAAAATTGCAACCACTTTCCCAATGGC TCCATTATTCAAACCTAGAGGTGTTAGACTGAGTTGATTCTTTGTCAAAA GTACTCGACTTCCAACAGCAATGTACGAAATTGCAGGTATTTGGCCCATC TGATTAACAGATTGAGTGTGGTGGCGACCCTTTCCTTTGCTGGGTATAGT ACCGACAGGGACTTgtaaatcaaaaagtttgttgtgATTTTCAACATTGA CTTCCTGCCATGTTTCCATGACAGTTAGAAATGTATCTGCTTTAAAACCT TCTCTCACACTCTCAGGAAGATCTCCTTCATACCTAGAATTAATTGTCTT CCAATCGTCCAGATTCAGTTTACCTTCTCTAATTCTCAATAACAtttcca aaaaagaaatttgatctGGCCCTTGTCGCATTGTCGATAGATTGCATAAC CTGCAAGCTTATCAGGAGAATCTGTAGATAATGGCTCAATGTGTAAATCT TTTGCATCAACAGGCCCTAATTGACCCAAATCtccaaaaaaattcacagc TGGTATTGCACCAAAGTTGTTGGAAAAATCACACGTGGCCTCTCTAAAAC GTTGACTACACCATGCTAAGACACGGTGACTATACATATCTTTCATCTAA ATTCAAAGTCATCAATTTCATAGAATTACCTTCCAGAGTGCTACCAGTTA GATTACGTAGGgcagtactcttaggtgccaaataaacggtcccccccact tgttaatttttcgaaaattttccaacttccccggaccttattaggacccc ccccgtttattaattttaaagaaattttccgTTGGCTtaaagaagtcccc ttattttgctccaaaaagcctgattttaggctatatttaccttattttgg gattttcataagtacaatttccaacccccccggcaattaggtcccccccg tttattgaaatttcaaaaaatttccaacccccccgtttattccaaccccc cccccccgtttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT ATCTTGAAAACCAAAACCAGACCAGTACTGGTTTTAAGAATGCTTAAAGA GGAGGTATATGCAACAAAAAGAGCTCACCATTAATTTTTTCCCGCTGCTG CCTTTCTATTGCCTCTAGCGTGTCCGTTTGTTCGTCGATCTTGATGACGA CAGTTGTTACTGAAAGATGAAATGATATTAATTGCTCCAAAGTCATAATA AAATCATTCTTTTTCCAATATAAGGCTTTGATCTTAAAAAGATAACCAAT TCCCAAGTCAATAGATCCATCCATCATGGCAGACTTTTAggaatttatga tttttgcccgTTATTAAAAGACAACCTGGAAAATGTGGAGCTTATTTTGG ACTGAAGCTGGTCGATCTTTGCCTCCAGGGGCTGAAGACCGTATACGTTC TCCGTCTGGGTGCTCACATCCATCAGAcgtatttttttggtaaaaaaacc AGCCATTTTTCTTTTGGTTTAATTAATACTATTACTAAAACAAAAGATAA AACGGTTAAAGCAatttaaaagaatcaaaaacGAATAAATTGACCACAGA AACTTAAATAACATTTAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNc cttgagtgcccccccccgggggtttcAGAAGGTCATGTGATATCACCATC ATTAACCAACTATCATCATTAACCGACCCTTACGAGGGATTATCTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00036352TCONS_00036352Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001448supercontigsc0001448:3980..9025 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.09 0.16 0.1 0.14 0.12 0.14 0.54 0.55 0 0.16 0.2 0.2 0.24 0.14 0.1 0.12 0.25 0 0.11 0.08 0.28 0.22 0 0.33 0.7 1.13 0.27 0 0 0.07