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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000049_pilon:1681600..1686641- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_017158 ID=XLOC_017158|Name=XLOC_017158|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5042bp|location=Sequence derived from alignment at sc0000049_pilon:1681600..1686641- (Clytia hemisphaerica_ch_hm2_pilon)
TGTGTCTTAAAACAAGACACAGTATTATACATGGGAAATCATGATAAGGA
AGTCGGTTGTTTGGAATATATTTTAGAACATGGTGCTGACGTTGATTTTG
TTGCCGGTGACGCCGATGTAAGTTTGATTAATTGGGCTCTTCCAGAAAAT
GTTCGTACATGGGGTGGAAGATATAGTGTCCGGGGGTAGTAAAAAATCTT
CGAAATTTGCCTTGTCCGTGGGATAAACTTGCTCTGTTTGAGGGTAATGC
TCTGTTTAAGGGTAATTTTGTGTGTCCAGGGGGTCAACTAATAATGCTTT
TCCGGGGGTTAGACCTGTTGTCCGGGGTCAAAAGTCACAATGCTCGAGGG
TAATTTTCCAAAAAATGTTATATCCTCCACCCCTCATATTCAAATTTTCT
TTGAATAATAATTTCTTTCTGGAAAAGTCGATTGGATCTATGGATTATAA
TAGGTGGTTAATGTCTCCTGTTGCTCCCAAAAAAATTCATTGTCTTCCTG
CCTATTGTCACATAAAAATATATGTAAGTGACTCTTAGTGCGCACTCCTC
GTTTTTTGTTGTTTCTATAAGAAAATTTTTCGAATTTAATAGTTTTTTGC
TTTTGAATACAAAAGTATCGCATATATTATGGAAATATTATGTCGATTTC
GAAAATATTTTAAATTTCACTTTTATTATCAATGAACGCTAAAGCATTCT
TATCTTTTGTCTATGGATTTTGTCACAATTTTTAAAAGTATGGTCTAAAA
ACAGCTAAAAACCTCTTATAACGAGTCACTGACGGATTGCGTACCGGTGA
TAGAAGACTTATTTCGAATCGAAAAAATGAATTTTCACAATATTTTACTT
CCTTTACATTCGATATTTTAAGGATTGAAATGAGGGATTTTCTTAAGGCC
GGTCTCCACTTTCGCGCGAAATGGGCGACAGTTTTTTAGTTAACCTTTTT
TGCCGGAAGAAAAGATTACCAGTCTGTGCCACTAACTCGATCGGGAAGAT
TCTTCAGAAATGGGAAGAACCTTCCCGAACGGGAAGAACTTACTCTATTT
TTTTCTGCCCGTTTTGGAAGATTCTTCCTCTTTGGGAAGTTGAAAATTGA
CTGAATCTCGGCGAAGCTGTACGATGACCGGCGAAAGTTGAAACTTTTTG
GAGGTGAAGAAGCATCAAATTTTAAGGTTTTTCACCGAAAGATAAGTAAA
CTTTACCGTAGAAATCTTGTTAAATTGTGAAAAAACTGCGTAAACTTCCC
AAATGGGAAGTTCCAACCCGATCGAGTTTTCCTTAGTTTCTCGCTTCTTC
CCGATCTGGAAGTCCGTTAACCCGTTTGGGTGTTAAGTTAATTTCCCGTT
CGGGAGAGTTCTTCCCATTTCGGAAGAATCTTCCAATTTTGGAAGAATCT
TCCCGATCGAGTTAGTGGCACAGACTGATTACGTCATAAAAAAGTTTTGC
GCAAACAGAAAAAAAGTTGACGGAAGTTCTACTTTTTTCCACCGTTACGT
CAATTTCGACTAATGGAATTGCTTCATTTTTCAACCGACCAATGACCTTA
CAAAAACGTCAAAAAGTTTTCGCTCATGTCGCGCGAAAGTGGAGACCGGC
CTTTATTTGAAATATACCACATGACACAACATGACGAATAGCACTGTTGA
TAGTAAGATAGTAAAAGAAATATAGTTTTTTAATCCACATAATTACAAAG
ATTGGTACCATGGGTCTCTACAACAATCTAAACGTTGTAAGCTGGATGTC
ATTTCCCGGGGGTACTAGGGTTGCGAGCTGACGGAGGGTTGCCGCCCGAC
TTTCGACCCTAGGACCCCTACCGGGACTAAAAAGGAGATAACAAAGGAAA
ATTTTGTGAATTTCATGACCCTTATTGGGACAAATTTGACCAATTTTGAC
CAAATTTCGATATTTCCACTTAAAAACAAGTTGAAATTTTCCGATATCTC
CGACCCTTAGTGGTACTGAAATTTAATTTTCTGATTTTCCGGACCCTTAG
CGGGACTTTGGAAATCCAAAAAAGGTACCCTTAAGGGCGGCACATACCGT
ACCCTCCATTTGCCTAAGAACCCCCCCCCCCCCGGTGTCATTTATACCAA
TGTGTTCTCTTTTAACTTTCAGCATGATTGTACGGCATTGATGTTGGCGA
TCAAACTGAATTGTAAATGGACCGTGGGGGCTTTATTGAAACATGAACCA
AACCTCGATCATCAAGATAAGAAAGGATTTTCTTACATTCACGCATGCGT
ACAAACTTCTGACGTAAGTGACCAAATGGCTTGGGAGTTTCTTTGTGGCT
TTTTATTTTTTTATGTACTGTATTTACGGAGCTTAAATATAGCAGTAGTT
ATAAAAAGTAGAAAAAAATGGTCTAATCTAACAAGATTTTCGAACAAATA
CATTCGAAATTATAGCACGAAAGCGGCCGTAAATAGTCAACCTCGTCTCC
GTGTATCCCAGGCTTTAATAAAAAGTGGATTCGAATAAAAAATGACTCAG
TAAAGAAATTATCATTATTCTCAACTTCAGTTGAGCTAGAATCTGAGAGT
GTGTGTGTCAAAACGAGGCTTAAAACTTAGGGACAGGCTGGTGATTTAAA
AAATGGTTAACATTTTGCACACTTGCGTTCCTTGGGTGAATATCTGGGGA
GGTTTTATTCATTTTTTTTCAAAATTTTCATTTTAAGGGTGTGGTCACAA
AGTTTAGCCCAAAACGAAGCTAAAACATTTTTTTATATATCAAAGATTTT
CTGTCACAACAATTTCTTAAGAACATGAGATTAAATTTTGGCCAAAACCG
AATAACAGGTTAAAAACAAATCTATCCTCAGACTAGATAATAATCAATAA
GTGAATAAGGGAATCATCGTAAGAACGTTTTAAGAATATTTTAAGCCTGA
AAATCACGACCAACCGAGAATCAAAAATTAACCGATTTTCAAGAAAATGC
ACTCTAATTATCCTTTCTTTCACCTTAAGATTTTTCTTTCTCCATAGTAC
GCCTCCCATGAAGATGTAGAGATGCTGAAAATTCTGGTCAAAGCCGGTGC
ACCAATGAACTTAACCAACAACGAAGGTCAAACACCATTCGATATGGCAA
AACAACAGCCGTCAGGTATCATGGCTAATAAACTGGCAAAGTATAAAGCA
GTGGTAAGTAATTTCTAGAATAAACAGTTAAAACTCGAAACAAATTCTCG
AGAAACTCAAAAAATAAAGTTATCAAGAAGAATATTCAATATATCCTCCA
CCCCTCTCCCGATGTACCGCCCACCGCCCGTTTACAAAAATTTTCTAGAA
GAACCCAATAGTTATTACGATTTACTTTCTAAACCATCATCAAGACTCAG
AGACATCATTATACACATTTTCGACCGTAGTCGCGCGGTCAGGCGCATGC
CACTTAATTATTTAATTATCCCCCTAAACTAGATCCAATCTTTTTTTGAC
ACATTTTTCTATTGTCTGTAAGTGCGAAAAAAGGACTGGGACGGTTTTAG
TGGGATAAAGCGGACAAAAAAATGCCCGTGCGGCAATTGGCGGCTACGGT
CGAAAAGGTGTATTGAGAGGTGAAAACTAACATTTAAATTACTTTCTGGC
GAGGATCTAAGATTTTTTTTCTCGTATTTTTAGGGGGGTTGTTAGGACTA
ACTTTTTAAGCCCATTTGTCAAAAGTTGCCTTTGGATATAAAAAGAAGAA
AAATTCATGTAAAAACCCTGTGGCACTTTTTTCAAGGTTGCCACGGGTAG
GGTGCCACCGTCGCTCCGCCAGCAAAATCGAAATTTCAAAAAAAATTTAA
ACATAGTGAAGTGACCCCTCATTTGAAAGGTATTTTCATGCTGATTAAGA
AAATCAATATTGTAAGGGTGAAAAACACTCTAACAAGAAGTAACTTAAGA
AAAACGATCAAAAAATTGCGTTTTTAGAAAAATCCTCAAAATTTTGCCAA
CTGTCGGAAATTTCTTTTTGTGACAGTGTTTTTCACCCTTACAATCTTGA
TTTTCTTAATCAGCATGAAAATACCTTTCAAATGAGGGGTCACTTCACTA
TGTTTAAATTTTTTTTGAAATTTCGATTTTGCTGGCGGAGCGACGGTGGC
ACCCTGCCCGTGGCAGCCTTGAAAAGGGTGCCACAGGGTTTTAACATGAT
TTTTTTTTCTTTTTATACCCAAAGGCAACTTTTGACAAATGGGCTAAGAA
TTTATGCCGTTTTTGCAAAATAACATCCCCCCCCTAGTATTTTGATAAAG
TCTTTTGAAACCAATCAGAAAGCTTTATTTATCATCCCCGTTTCGGTTTC
CACCTCTTAATAATGGTTTCAACTAACGAGGGCACGGTTTACGTGAATAC
GTGCATGATTGGGTATTTTTTTTTGCATGAATGCGTAAAAATGGAAACGA
AAATTCGGTGAATATGTTAAGTGAAATAAATTGCGTGAATTTTTGAATTT
TGTGAAATTTTAGAACAATCCACGATTGGCACGAAAATTTCTCTGACTTT
GAATTTGAAAATCATTGTGTGAATAGTGTGAGTTTTTGGTCACATGAAAA
ATTTTTTTGAAATCTTTGAACTACGAACTACGAACAAAATTCTTAGCCCC
TTCTGAGAATTCGAATTACATGGGTTTTAAAGAGACGTGAACAACGTGTC
ATTAAAGAGAACAATTACAATCGTGTGTCCAAAAGAAACTTTGTAAAACA
ATAGAAACAATCAAAATCAGCCATATTTGTTTTTATTTTGACATGTGACA
TTTCGTTAGTACTTTTATGTCCCTTTAAACTGTATATGCATTTATTAATT
TATTAAGTGACGGAATTGTTTTTGAATCATAGTGTACACAAGACCTTATG
GAAACAGACAAGAATTACGAACAAGGTTTCAAATTCACCAAGGAAGATCC
ATTGAAGGATATGACCTTTGATTACAAAGCAGATCACAAAGCAGAAATTG
AAGACAAAATTGAAAAAATCGTGGAGGATTATCAAGAGTCGAGTGAAGTG
GATCATGCAGCTAAAAGCAACATTGAAGGCACTGATATGTAG Coding sequence (CDS) from alignment at sc0000049_pilon:1681600..1686641- >XLOC_017158 ID=XLOC_017158|Name=XLOC_017158|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1248bp|location=Sequence derived from alignment at sc0000049_pilon:1681600..1686641- (Clytia hemisphaerica_ch_hm2_pilon)
TGTGTCTTAAAACAAGACACAGTATTATACATGGGAAATCATGATAAGGA
AGTCGGTTGTTTGGAATATATTTTAGAACATGGTGCTGACGTTGATTTTG
TTGCCGGTGACGCCGATTGTGTCTTAAAACAAGACACAGTATTATACATG
GGAAATCATGATAAGGAAGTCGGTTGTTTGGAATATATTTTAGAACATGG
TGCTGACGTTGATTTTGTTGCCGGTGACGCCGATCATGATTGTACGGCAT
TGATGTTGGCGATCAAACTGAATTGTAAATGGACCGTGGGGGCTTTATTG
AAACATGAACCAAACCTCGATCATCAAGATAAGAAAGGATTTTCTTACAT
TCACGCATGCGTACAAACTTCTGACCATGATTGTACGGCATTGATGTTGG
CGATCAAACTGAATTGTAAATGGACCGTGGGGGCTTTATTGAAACATGAA
CCAAACCTCGATCATCAAGATAAGAAAGGATTTTCTTACATTCACGCATG
CGTACAAACTTCTGACTACGCCTCCCATGAAGATGTAGAGATGCTGAAAA
TTCTGGTCAAAGCCGGTGCACCAATGAACTTAACCAACAACGAAGGTCAA
ACACCATTCGATATGGCAAAACAACAGCCGTCAGGTATCATGGCTAATAA
ACTGGCAAAGTATAAAGCAGTGTACGCCTCCCATGAAGATGTAGAGATGC
TGAAAATTCTGGTCAAAGCCGGTGCACCAATGAACTTAACCAACAACGAA
GGTCAAACACCATTCGATATGGCAAAACAACAGCCGTCAGGTATCATGGC
TAATAAACTGGCAAAGTATAAAGCAGTGTGTACACAAGACCTTATGGAAA
CAGACAAGAATTACGAACAAGGTTTCAAATTCACCAAGGAAGATCCATTG
AAGGATATGACCTTTGATTACAAAGCAGATCACAAAGCAGAAATTGAAGA
CAAAATTGAAAAAATCGTGGAGGATTATCAAGAGTCGAGTGAAGTGGATC
ATGCAGCTAAAAGCAACATTGAAGGCACTGATATGTAGTGTACACAAGAC
CTTATGGAAACAGACAAGAATTACGAACAAGGTTTCAAATTCACCAAGGA
AGATCCATTGAAGGATATGACCTTTGATTACAAAGCAGATCACAAAGCAG
AAATTGAAGACAAAATTGAAAAAATCGTGGAGGATTATCAAGAGTCGAGT
GAAGTGGATCATGCAGCTAAAAGCAACATTGAAGGCACTGATATGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000049_pilon | genome | sc0000049_pilon:1681600..1686641 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 418-627:211 |
| Aaloc | 262-417:2046 |
| Aaloc | 121-261:2921 |
| Aaloc | 4-120:5043 |
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