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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000028_pilon:2124350..2129764- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036520 ID=XLOC_036520|Name=XLOC_036520|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5415bp|location=Sequence derived from alignment at sc0000028_pilon:2124350..2129764- (Clytia hemisphaerica_ch_hm2_pilon) CCCAGGGCTAGAGGCCAAGCCAAGGTAAGGTTTTTCTGTTTTCTTAACGA
TTTTTATCTATTTTGGTCACCTTTTACTACAAACATAGTTACTAATCTTT
GAAATGTAAGAGCTGTAACCTTTACTTTTACTCCATTTTTTATTATTACC
TGATTTTATCAACCTTTAAAATCTTTGTCTTTTGGAAGTCACTCCTTGCT
CTCCCAGGGTTCATGGGCAATTCGTAGAAATACTGGTCAAAATCGAAAGT
GTACTTCCTTCCCAAGTCTCTGAAGGCATACTCCAGCTGGAAATGGCGAT
ATCTATCCTTAGCACAAAAAAGACAAAAAGTTAGCTCCATGGTTAGCTGG
ATAAGGTTTAATGTTACTGAAAATGTAGTCGAAACTGTTTGTTTCTGTTC
ATTATCTCAAAATTTGGTGGTCTCAGAATTTCGATAATTTTAATATTCAG
ATATAAATGTTTTTTTCTTTTATAAGCATAACATTTATAAGCATATACAG
GCTCAGTTTTTGATACCAAAACAAAGGCTCTATTTAACTGTTGTTAAAAG
TTTTGATGTTTTTTAAAGATCAGTAAATTTCGCAACGCTCGCAACGGATT
TTTCCACTTGAGTAGTGCTCCGTTCGATCGCAACGTTCGCAACGCACTTT
TCTCCATGAAATATTTCAAAACCTTTAAATCCTTCAAATACAGCCCAATT
AGGATACGTTTTGCGAATCTTGGTCAAAAATATGAGAGAATTTAGCCCTG
TGAATTGCCAATTATGCCGTGATTATGCCCCAGTAAGGCTCAATACTTTT
ACAAAGAATGGTTTTCTCCCGGGGGGGGGGTACTTAGGCAAAAATGGGTG
CTGGGTATGTGCGTGCCTTAAGGGTAGGGTTTTTCACCCTCCCAAAGTCT
CTCTAAGGGTTACCAAAACAACAAAAGTCAAAATCAGTCTCTCTAAGGGT
CGGTTTTTTCACAAACTCGGGTCAAAGAAAAGTGAAAAGTCAAAAAAGTG
AGAACATTTTTAAAAAAAGTGAGAAAATTTTTCAAAAATTAGAGAAATTT
TTCGAAAATTGGAGAAATTCTTTTAAAAATCGAATTTCTTTGGTCCATTA
TAGAAATTTTTTGTGAAAAAGTCTCTCTAAGGGTTGGGTTTTTCTACACT
GAGTCTCTCTAAGGGTCACCTTTTCACCAAAATTCAGTCTCTCTAAGGGT
AAGGGTCCAGAGGTCTGGCACGCACATACCCGACACCCATCAATCCTAGT
ACCCCCCCCCGGGGGTTTTCTCAAAAGTGTTTAAATTTCTTCCAGCTGGT
AAATATTTGCAAATTTTTGGATCGTGGGTAATGTACTTCACCAACACGGA
TCTCTCCCATGTTTTTCATAGCAAGTTTGGACAGCAAAAGAGTACCATTT
TCTTTCTTTTCGTCTCAAGACCTCTCCTATAGATGAAAATTGAATTTTAG
ATTCGTTAAGAATACGGAATCTTTTTTGTACGACGAAAACTGGTCAAATT
TGACAAAAAGAATTAAAGAAAAAATGTCCTTGTCTCGGTCCTTTTCTCAG
TCCTGTATATTTTTAATTTTTTTGATAATTTTTGAAAAAATCGACTGAAG
ATTTTGCAATTGTGCACCATTACGAATTGGCATCTTTTCCCAAAATGAAG
GGTCTCTGTTGAATTATTTTTTTCACTTTCAATTTTTTAACTGGATTATC
CACTGGGGTGGATTACAGTAGCGGCCTGGCTTAATTTTCTTGGTGGTGCA
AACTATGAAATTGGCGCCCCTGGTATTTTTGTCCTTATTTGCGCCCTCCA
TCATTAAGTGAAAATACTAAACTGTAACAGCAGTGACTGGTTGAAAGTAA
CGCCCCTATTCTTTTAAATATAAATTTTATACCTGGTAAGTCGATTTGGT
CTATATTTTTGCTTTCTAAAACTCTTATCAAAAAAAATTACCGGATAATC
TTTAAACTTTTGCGTCGCTGGTCTTACTTTACTGTCTATTAAAGATCAAT
GGCTGAAAGAGGCAAAAAATTCACAAGTTGGGAGGAAGGGTTCCTTGTAA
TTTTGCGCCGCAGGCAAAAAAATTTGGTGTAAGAAAGGTCAAACAGCTTA
AAAGATCTTCTAAAACGGAGAAAGTTAGTCAGTATAAGACCACAAAAGCC
ACAGCGAGAATCAACAAGTTTTGATCATTTTGGCAATCTCTCATTTTGGA
GGTGAGCATTCACTTTAACCCCTGGTGGATACACAACACTTCTCTTACTT
CTGATTCAATTATATTGATAGAAGTTTTGAAAAAATTCTCCAAAAATTCA
AGAGAAATGATGTAAGAAGGTAAAGTAAAGCGCCGCAGGCGAAAAAAATT
AACATTGTACTCATAGAAGGCGCTATAAACATGCCGAAGGGCGCCAAATT
GCCCAATTAAACATCAAAAAAATTTTGGCGCCCCCTTAAAAAGCTCTTTT
GGCGCCCCTCTCAGATCTTTCTGGGTGGTGCACTGCACACCCTGCACCCC
CTGCCAGGCCGCCACTGGTGGATTATCGATATAGGGGTGTAAACAACGCA
CGATAAACAATTCTAAATCCCTTTATTTTGACCTGACAGCGAAATGGATG
CTTCTGTTGTGACTCCAATGATCACAGAAACATCAACGAATGACGAGGTT
TATAATTTCATACAATTACAACACACTTCAAATGAAGCTTCACAACCATC
AGAAATGGAATCAACAGTTCAAACAGAAACTATGGAACACGATTCTCAAG
TGATCGAACCTCGGAAAGAAATAGGAACTACTGCTGTAGACCAAACGAAT
CAATTCGATCAAAACATCACACATATGACACAAAGTAAGTTCTATTTTAA
AATAGTATCCTGTCATTTGGCTGAATTCAAAAGTACCTTTTGCTTTTAAA
TTGAACTGTGATACATGGAGTGTATATGATACATACCTATGACTTTATCC
TGCAAAATCTTACTTTAACACACCCCTTCTCACAGACCCGGTAGGATTGG
GATTTATATTCCCATGTTTTTTTTATGGCTGGAAATTTAAATTCCATTGC
TTTCGAGTCAGAAAATTCAGTGGGCATAGCGTCAGCCCCCCCCCCTTAGT
TTTAAGCCCCCCCCCCCCCCCAAGGCTTTCGACCCTCGACCATTTGTTCC
ACAAAAAAAAGGGTTATTCAATGTAAATTGTGTTGCAGTTCGAAGGTTAA
GATAAAACATTTTGTTAACTAAATAAAAACATTGCGTCGCAGAGGAAAAA
TTTTCAGCTTCATGAGCTTTAAATTTGAGTAATTGAATCCAACCATTTTA
AAGATGAAGTTTTCAGCCCCCACGTTAAATGATGAGATTTCAGCTCCCCC
AAGTACATAGGACCCCTCGAATATTTGAAACATCTTCAGCCACCCTTTTT
TGGCTTTTTGGAGGGTGTGACCTCCCCCCCCAGCTAGCATGGGGGCTGAC
GCTATGGTGGGGATGGAAAAATAGCAATATTTGGTAGTGAAGATTTGGTT
ATTTGATTACTTTCAACAGGGGCAAAAATTGTAGCATGATTTTCCAGTAG
GGACAATATTTTGTCCATTTTTTCCAGTCGAAGGGGTTTCCCCCGTGTCT
GTGGAGAAGAAATAAAACAATTTTCTAATGGGTAGGAAGTCCTACCGATT
ATGTGACAAAAAGCTTTATAACTAAGTCTCTGTCTTTAATCTTTTAGCTT
TTGAACCTGTGAATTTGTACGTGTGTGACAAATGCAATCGAACATTCAAA
CAAAAATCACGATACGAGCGTCATATACAGAACCATCCTAGTGAGAAACA
TTATCTTTGTGAAACGTGTCACAAGACCTTCACAAGAGTGTCACACTTAG
AGAAACACATTAAAACGCACACTGAAGAGAGAAGTCATTTATGCGAGGTG
TGTGGCGCCGCTTTCATTCTACCACACCACTTGGTAAGACATATGCTCGT
TCACTCAGGTGAGAGACCTTATCAATGTGAAGTATGTAATAAAACGTTCA
CACGGAAAGCTGGACTCACGCAACATCAACATGTTCATACCGGTCTACGT
CCTTACGGTTGTGAGCATGAGAACTGTGGTCGATATTTTACTGATAAGAC
TACTTTACGTCGACACATGATGACGCACTCTAGTGAAAAACCATTCGTTT
GCAAAGAATGTGATAAAACTTTTCGGACAAAATCTGCATGTCGGAAGCAT
TATTTGCGACATTTTAAAGATGGTGCATCATATAAATGCGGTGTTTGCGA
AGAAATGTTTAAGGATGAAAGAGAGTATAAAATGCATTTAGAAACACACG
ACGAGAAGCAACGTACCGGTGCTCACCGATGTGGTTTCTGTTTGCGTGTT
TTCAAAAGTCAAGAAGATCTGAATGCTCATGTACCGTTACACGAATCGGG
TCTTCAATACACATGCGAGCGATGCTCTGCCAGGTTTTTCACACAAGTTG
ACTTCTTGAAACACACAGCTAAACATTTTGAAGAATCTACTTTAGCTGTT
GAGCAAAATATACAGGAACAACACCACGTATCTACCGCAACCAATGCTCA
ACCAAAGGAGAACGAAGTACCACAACAAAAAGACGCATTACCGAATCCAC
AGAATACTCTCCAAGAGGGTAACGAAAATGTAAACAAACTACTGGTCGTC
TTACAGCTTCCACAGTCTGCATCCAACCTCAGAAACGAACAAGGTGCGCT
ACAAGTGGACAGCATTCAACAACTTCTCGGTACCGTAAGAATTGACAAGT
TAGTTGTCACCACTGATCCCATTTCTAATTCATCACAAGCAGTGGCTTTA
CAATTATCACAATCTCAACAACAAAGTATTCAGCAAATTCTACAAACAAC
CCATATCAGACGACAAAATCCACCTATTTCAACTCTGGAAAGTCTCAACA
AAGCCCCACTAAATGCTCTTGAGACACTTACATCCACCTTGAACGAGGCT
GCAACGTTTCCTGATTTGACATCACACGATACGATGGACGCTCCCGATCT
TTCACAGCACGTTCAGTCATCCTTTGTCCTCAAGTCACTCTCACATCAAC
CGCCCCCACCGCCGGAAAGCAAATCAGTCTCTCAATATCTCATTGTACCA
CCAACAGGCCCTGGGTTTACACCAATTGTTAATTCGAAGATCAAAATTAT
CCACAAACCGCCAGAACCGATCGGAAATAACTCTGTTTTCACTAGACCAC
CTCCGAATCTTCTGCAAAACAATGAACTGGTCCCAACCCATCCTTTAGAA
CTGATCGTAAATGATGAAGATGTTCCAGAAACAGGTGTCAAACAAGGGGA
TTCTTTTGAACCAAATACGACTTCCTTAACCATGGGTTCTCTTCATCAGA
CTCCTGAAAATTCAAATACAGAAGAGAAAGTCAGGAATTCATCCTCGTCC
AATTATTTTCAGCAT Coding sequence (CDS) from alignment at sc0000028_pilon:2124350..2129764- >XLOC_036520 ID=XLOC_036520|Name=XLOC_036520|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3978bp|location=Sequence derived from alignment at sc0000028_pilon:2124350..2129764- (Clytia hemisphaerica_ch_hm2_pilon) CCCAGGGCTAGAGGCCAAGCCAAGCCCAGGGCTAGAGGCCAAGCCAAGAG CGAAATGGATGCTTCTGTTGTGACTCCAATGATCACAGAAACATCAACGA ATGACGAGGTTTATAATTTCATACAATTACAACACACTTCAAATGAAGCT TCACAACCATCAGAAATGGAATCAACAGTTCAAACAGAAACTATGGAACA CGATTCTCAAGTGATCGAACCTCGGAAAGAAATAGGAACTACTGCTGTAG ACCAAACGAATCAATTCGATCAAAACATCACACATATGACACAAAAGCGA AATGGATGCTTCTGTTGTGACTCCAATGATCACAGAAACATCAACGAATG ACGAGGTTTATAATTTCATACAATTACAACACACTTCAAATGAAGCTTCA CAACCATCAGAAATGGAATCAACAGTTCAAACAGAAACTATGGAACACGA TTCTCAAGTGATCGAACCTCGGAAAGAAATAGGAACTACTGCTGTAGACC AAACGAATCAATTCGATCAAAACATCACACATATGACACAAACTTTTGAA CCTGTGAATTTGTACGTGTGTGACAAATGCAATCGAACATTCAAACAAAA ATCACGATACGAGCGTCATATACAGAACCATCCTAGTGAGAAACATTATC TTTGTGAAACGTGTCACAAGACCTTCACAAGAGTGTCACACTTAGAGAAA CACATTAAAACGCACACTGAAGAGAGAAGTCATTTATGCGAGGTGTGTGG CGCCGCTTTCATTCTACCACACCACTTGGTAAGACATATGCTCGTTCACT CAGGTGAGAGACCTTATCAATGTGAAGTATGTAATAAAACGTTCACACGG AAAGCTGGACTCACGCAACATCAACATGTTCATACCGGTCTACGTCCTTA CGGTTGTGAGCATGAGAACTGTGGTCGATATTTTACTGATAAGACTACTT TACGTCGACACATGATGACGCACTCTAGTGAAAAACCATTCGTTTGCAAA GAATGTGATAAAACTTTTCGGACAAAATCTGCATGTCGGAAGCATTATTT GCGACATTTTAAAGATGGTGCATCATATAAATGCGGTGTTTGCGAAGAAA TGTTTAAGGATGAAAGAGAGTATAAAATGCATTTAGAAACACACGACGAG AAGCAACGTACCGGTGCTCACCGATGTGGTTTCTGTTTGCGTGTTTTCAA AAGTCAAGAAGATCTGAATGCTCATGTACCGTTACACGAATCGGGTCTTC AATACACATGCGAGCGATGCTCTGCCAGGTTTTTCACACAAGTTGACTTC TTGAAACACACAGCTAAACATTTTGAAGAATCTACTTTAGCTGTTGAGCA AAATATACAGGAACAACACCACGTATCTACCGCAACCAATGCTCAACCAA AGGAGAACGAAGTACCACAACAAAAAGACGCATTACCGAATCCACAGAAT ACTCTCCAAGAGGGTAACGAAAATGTAAACAAACTACTGGTCGTCTTACA GCTTCCACAGTCTGCATCCAACCTCAGAAACGAACAAGGTGCGCTACAAG TGGACAGCATTCAACAACTTCTCGGTACCGTAAGAATTGACAAGTTAGTT GTCACCACTGATCCCATTTCTAATTCATCACAAGCAGTGGCTTTACAATT ATCACAATCTCAACAACAAAGTATTCAGCAAATTCTACAAACAACCCATA TCAGACGACAAAATCCACCTATTTCAACTCTGGAAAGTCTCAACAAAGCC CCACTAAATGCTCTTGAGACACTTACATCCACCTTGAACGAGGCTGCAAC GTTTCCTGATTTGACATCACACGATACGATGGACGCTCCCGATCTTTCAC AGCACGTTCAGTCATCCTTTGTCCTCAAGTCACTCTCACATCAACCGCCC CCACCGCCGGAAAGCAAATCAGTCTCTCAATATCTCATTGTACCACCAAC AGGCCCTGGGTTTACACCAATTGTTAATTCGAAGATCAAAATTATCCACA AACCGCCAGAACCGATCGGAAATAACTCTGTTTTCACTAGACCACCTCCG AATCTTCTGCAAAACAATGAACTGGTCCCAACCCATCCTTTAGAACTGAT CGTAAATGATGAAGATGTTCCAGAAACAGGTGTCAAACAAGGGGATTCTT TTGAACCAAATACGACTTCCTTAACCATGGGTTCTCTTCATCAGACTCCT GAAAATTCAAATACAGAAGAGAAAGTCAGGAATTCATCCTCGTCCAATTA TTTTCAGCATCTTTTGAACCTGTGAATTTGTACGTGTGTGACAAATGCAA TCGAACATTCAAACAAAAATCACGATACGAGCGTCATATACAGAACCATC CTAGTGAGAAACATTATCTTTGTGAAACGTGTCACAAGACCTTCACAAGA GTGTCACACTTAGAGAAACACATTAAAACGCACACTGAAGAGAGAAGTCA TTTATGCGAGGTGTGTGGCGCCGCTTTCATTCTACCACACCACTTGGTAA GACATATGCTCGTTCACTCAGGTGAGAGACCTTATCAATGTGAAGTATGT AATAAAACGTTCACACGGAAAGCTGGACTCACGCAACATCAACATGTTCA TACCGGTCTACGTCCTTACGGTTGTGAGCATGAGAACTGTGGTCGATATT TTACTGATAAGACTACTTTACGTCGACACATGATGACGCACTCTAGTGAA AAACCATTCGTTTGCAAAGAATGTGATAAAACTTTTCGGACAAAATCTGC ATGTCGGAAGCATTATTTGCGACATTTTAAAGATGGTGCATCATATAAAT GCGGTGTTTGCGAAGAAATGTTTAAGGATGAAAGAGAGTATAAAATGCAT TTAGAAACACACGACGAGAAGCAACGTACCGGTGCTCACCGATGTGGTTT CTGTTTGCGTGTTTTCAAAAGTCAAGAAGATCTGAATGCTCATGTACCGT TACACGAATCGGGTCTTCAATACACATGCGAGCGATGCTCTGCCAGGTTT TTCACACAAGTTGACTTCTTGAAACACACAGCTAAACATTTTGAAGAATC TACTTTAGCTGTTGAGCAAAATATACAGGAACAACACCACGTATCTACCG CAACCAATGCTCAACCAAAGGAGAACGAAGTACCACAACAAAAAGACGCA TTACCGAATCCACAGAATACTCTCCAAGAGGGTAACGAAAATGTAAACAA ACTACTGGTCGTCTTACAGCTTCCACAGTCTGCATCCAACCTCAGAAACG AACAAGGTGCGCTACAAGTGGACAGCATTCAACAACTTCTCGGTACCGTA AGAATTGACAAGTTAGTTGTCACCACTGATCCCATTTCTAATTCATCACA AGCAGTGGCTTTACAATTATCACAATCTCAACAACAAAGTATTCAGCAAA TTCTACAAACAACCCATATCAGACGACAAAATCCACCTATTTCAACTCTG GAAAGTCTCAACAAAGCCCCACTAAATGCTCTTGAGACACTTACATCCAC CTTGAACGAGGCTGCAACGTTTCCTGATTTGACATCACACGATACGATGG ACGCTCCCGATCTTTCACAGCACGTTCAGTCATCCTTTGTCCTCAAGTCA CTCTCACATCAACCGCCCCCACCGCCGGAAAGCAAATCAGTCTCTCAATA TCTCATTGTACCACCAACAGGCCCTGGGTTTACACCAATTGTTAATTCGA AGATCAAAATTATCCACAAACCGCCAGAACCGATCGGAAATAACTCTGTT TTCACTAGACCACCTCCGAATCTTCTGCAAAACAATGAACTGGTCCCAAC CCATCCTTTAGAACTGATCGTAAATGATGAAGATGTTCCAGAAACAGGTG TCAAACAAGGGGATTCTTTTGAACCAAATACGACTTCCTTAACCATGGGT TCTCTTCATCAGACTCCTGAAAATTCAAATACAGAAGAGAAAGTCAGGAA TTCATCCTCGTCCAATTATTTTCAGCAT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000028_pilon | genome | sc0000028_pilon:2124350..2129764 - |
Properties
| Property Name | Value |
| Aaloc | 274-1989:1717 |
| Aaloc | 25-270:2829 |
| Aaloc | 1-24:5416 |
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