XLOC_020689 (gene) - C. hemisphaerica

Overview
NameXLOC_020689
Unique NameXLOC_020689
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001309:49362..53290+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_020689 ID=XLOC_020689|Name=XLOC_020689|organism=Clytia hemisphaerica|type=gene|length=3929bp|location=Sequence derived from alignment at sc0001309:49362..53290+ (Clytia hemisphaerica)
TTCTATCTTTGATCAATGTACTTGTTATTCTATCAAACGAAAGATCGATG GAGACACAAATAATGTGAAACAGTGTTTCCAAGGGCCCGGTTTATGTGGT TATAAACTTATAAATAGATTGAGAAAACTAAATTGATACTATAATACTGT CCAGGGTTACGGTAGCATGGGAGAATTTTTCTATCCCACAACACAGAAAT CCTGCAAGCAGACGGGTAATCTATATCAATCTAATTACCAGTAGTAggtt tgttaaaaaaaagaaaaggaaaggaATATGAACAGCAAACAGAACATCAT CTCAAACAACTTATAGATAGCAGATTGAGAAAACTAATCTGAAAACTAAT CGGCAAAGGAATAAtgtgaatatttcaaaaaagttaaacaaagtttctac tactactactacaaTGATTCTACAACACTTAGTATCTCTACTGGGTTTCG TCAATAGCTACTTTTTATCTTGTCAAAGCATTACCTCACCTACAGTATTC GAATCTTTTAataacaaagatggcggaaatTGTACCAAAAAGCAACCAGG CTTTAATACTCTTTCAGTAGTGGAATGTTTACTACATTGCAAATTGGAAA AAGGCGGTAAGGATGCTGTGATGGAGAATGGTGGAACCATTTGTTTTTGT GTCGAATGCGAGACACCAGAAAAGATAACCGAGAAAAAGTCACAAGACAC AATGGTAAACTCAACCTTTTACAGGGAATTAAAAGTTCTAAAAGGTAAGG AGTATAAGGGTGATGATTTTTTATTCGAGTCGCTAGATAATGTTGGATGT TGGTGTTCCATACTAGGTACATCCTTAGACTGAAGACTGTATACAcgttt ttacaagaaaaaactACATAGGGGGCcgacatagtacgtacgcactaaaa tcgTACGCAAGCgaacgcaaatggctataccccctggtaTGTACGTACTT TTTCCTTCAGCCccagaaaatttcgaaaacaaatcgtttggttcagacct ttatttcatacatgaaactcaatgtttgtCAAGAAACATTTTCTtctcct tgatgcgtataaagAAGCGTAAAAATCGAtagaaaaacaatcaaaaaagg gctatgaaaaaattcttcctgagtacgtacattttcctttgaccccttcC TTccctctgtacgcaagcatatgaTTTTGAgaataccccctcccccctta gtgcgtacgtactaagTGGACAGCCCCTTGGAACATCTAAtccttcgatg gccaaaatgttaagaacaagttaaacaCTATTTAAGGCTTTGAGAgttct aaaacacccgatttcttaagaaaatgggcAAAATTAATCATAAAcaagtg aaaataagaacatgttgagagcattttttggctaaaaagttaaaaaatta agaatatctcaaggcttcaaaaatttttgattttcttataaaaaaaaacg tgaagtGTACCACTGTCCACGGAGGAGTTGAGGTTAAAGGCAACAGATGA CCCGCAAAAtaaccaaatttcaaaatttagtttcaGGACCTATAGCTGCA ACAAAACAACCAATATGTTACCAACCGAAAGACAATGAGTACGCAACGTT CAAAATGCCACACAAAGGAATTGTTCGTTCCGTAACACTCATATATGTAT CAGGAAAACTTCAATGTACAGGCATGGACCAAACTACAAACTGGGGTTGC AACACTGCCAATTACCCCTCACAGCCTGGACCTCACGATATAATCGTGTC AATCACAGATGACCAAGATAAAACAATATTTCCAGACGAATTAATGAATG CTGGTGGCTTTATTACAGTTCCCGGAGTGGATCTAGATAGCCAAGAGTTG ACATTGGAGCCAAGTTCACCTTATGCTGTACAAGAACCGGACAAAGAAAT GAGAGTTTGGTATAACCAAGACTTGATTGATGGTAGTGAGCAGAACAACA CTGGAGAACAATGCGTTCACGTTGTAATCAATTATGCTTGAATTCGGTGA ATCAGCAGTTTCACTATGTCTTCAATTCAGAGCGAATCATGTTTACGGGA TGCTGAGTAAATACATACCACTTTTAAATATTCAAAGGTCCCGAAAAGTG TAGGGGGTCCTAATAATAGGGggctttttcaaaatctaattaACGTGGTG GGGGTCAGAGTGAAAGGAGGATCCGAAATTGTACCTAAAAAAACCCCCAA AATGGCAATACAGCTTGTGGTACagtagctgaaaatattttcaaaaatat tagaTAAACGGTGGGGGGGGGATAAGAACGGGGAGGGTCTGgattttctt tttagatttaAAGGGACCCTTAACAAGATATTCTCCAGAAATTTTCCCTA GGAGCAGAAATCGGAATTTTTCCGAGTATTTCTTTTTCTAAAGCCATAAG AGGACTAAAAGACTGGAACAAAAACGTACCCTCTTGTTGCCCTGTGGGTT TGTATATTAACCTTATTTGATAATACAACATTAATAATAACTGATAAAAC TACACATAACATCCCAATTCTCACAACTGTTATAAGTAAGAACAAAAACA CATAAACGACTGGACGGCTATCTTCtattgtgtctttgaagcgaTGTTca ttgccgcctgtatttcaaatcTGTTATAAataatccgacaatattccgtc atttttatttatttgaattacttactcgggtgagttagggtgtgtctaga tttttaaaattcacaaatcccgaatccgcgaccaatagcacccattctca gagattcacttatggatttttgagatgacctataccttaaggtttcagga cccggttgttacgtaattaaatatcaACTTAAAagttaattattaaagaa agtgtgaattatgacgtcatcaaattatgacgtcataaatcgtaaGTAGC TCTAACTCTATGAGTAAATGTCaaatctttctcaaatttggaccaaagat gcatcttaaTGGTGCCaaacttttcaatgaaagtttttttgaaaactttg acgacgtcagcaaaaaatgcaaaagatcgaaaaatgcaattttttgctga cgtcatcaaatttttccgaaattattttttctcaaaaagttacattttag tTAGATGcatttttggttcaaatttggtAAAGATtagaggtactttagag ccctaagtggatctctgaatctggctgctattggtagcgaaaacttaggg taaactgttaggtttCTGAGACTTCCCCTAAGTCACTCAagtaggtaaaa ggattgatagagcttgagcattactcgtaattcacaaaaaaaactattct aaattcttttgataagtttgcaatatatttttctacatttttcaaCGCTG AAATgtagaatttcaactgcgtgtatatttttgaatcacttttgtcactc caataaatttttgcatgtttttaacAAGGTGGCAACGAAGCTATcggtgt tatcttcaaaaatacaaaggagatggatgtcgtccagtcgtttatatgtt catagTAAGAAATATTTCAGGATTTTGGAGGAAGTTTTTGACATCTTTTT CGCATTTTCAAAATAACCTCCAGCGGAGACAATGAAGCCTATAACTTTTG GAGGGGGAAATAAAGAAGGAACTTACAATTGCCaaatggcacacaacgtt gtttcaacgtttatctaacgttcacaacgtccatataacgttagatgaac gttgaaacaacgttgtgtgctagctgggatTGCTACACGGTGTTTCATAC TGGTGCAATCTTCCTGCAGTAGGTNCAGCTGGGATTGCTACACGGTGCTT CATGCTGGCGCAATCTTCCTGCAGTAGGtattttactcgaaatttttttg agttttcattTAGCACtttgtgaattttttatttacttcactgtatctaa aattaaaatgtaataaatgtAATAATCAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00035398TCONS_00035398Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00035398-proteinTCONS_00035398-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001309supercontigsc0001309:49362..53290 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.14 0.17 0.22 0.14 0.4 0.34 0.52 0.61 0.57 0.61 1.01 0.47 1.99 1.79 0.57 0.67 0.57 0.46 4.5 3.56 2.02 1.68 1.19 2.13 1.53 3.1 0.67 0.78 4.19 3.2