XLOC_020603 (gene) - C. hemisphaerica

Overview
NameXLOC_020603
Unique NameXLOC_020603
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001287:21262..28151+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_020603 ID=XLOC_020603|Name=XLOC_020603|organism=Clytia hemisphaerica|type=gene|length=6890bp|location=Sequence derived from alignment at sc0001287:21262..28151+ (Clytia hemisphaerica)
CACAGACTTCTCATACCAAACTGCATCTAATTGATGCTTTCAGCACATAT ATTTTCGattcattttaacaaaatacCCCCTGGAGATATCATTTAAATTG CTTTTATTTTCTACCCTATCGAGGGGGTATGTTATATAATTTGGAGCTAT TGGAAAAGGTATTTAGCTAAGAGGAAGATTATACACGAAAACGCACAAGG GGAAAAAGCATTTGGTATCTAGACAGTGTCTAGTGCGGTTCATTCCATTT ACGAAAATTCAAATCTATTACACATTCTTTCATTCTGTCACCATCTTTCT GATTCGATAACAGTATTTGTGGTATATCTTTTTTGtcggaaaaatataaa attgggACACTCGCAAGCtgtaacaaaaaacaaactgcAAATTTTTCTCG TCAAGAATTCGATATAGTTATCGTATGAAACGTTTCTGCATACAACATTT TCcgagattttgaatatttttgaatatgGCGCCTCAAGCTAGCGACAGCG CGGTGGATTTGCCACCTAAAGGCTCCGCTGACAGCAATGGTGTGACGGTT GTGGACAGCCATAAACAGAAAGACTCAAAAGGATGTTGTAAAACCTTCAC TGACACGATTAATGCAAGCTTGGAAAACTTCTTTGGAGCGTGAGTATAta tgttttcatgtttttgcaaaggaaaatttcaatatttaaaatctTCTCCA GCCCTTATTTTAGCCGTTTGAAAACTGTTACCGATGTGTTTTTTATCGCT CTTCATCTATACTCGCAGACTCTTGTTTCGTCCTTCCCACGACTTATCAG TGCGACTCGGGTAAGCGAGCAGAGACGAGCATGTgaccttttaaaaattt ctaaaatcataaaaaaaaacgaTGAGTTTGTAAAAAATGGTTTTAACCAG CTGAGCTTTTGATAGGTCCTTTCGCCAAAAAAATTGACATCAATACGTCA ATATTACAATCATGGTCAGAATATGTTGACATTTTTGGGTGTTTTAGCTT TTTGCTGAATTAAAAATTCGGGCGAGAATGACAAACATTTTCAGTTGCTA CTTTATCTGATTGAATATTTCGACTTAGGAGGGGTACAATGGCTTCCAGG CTCTATTGTTAGCCTAGTGAGACCATTCCCAAgtttttggatcctcagat cttaAGCCCCTCCTAAGTCGTAAGTCTCATTTTAAAACtcaaactctact ttctaaggCACTTAAAAACTACTTGCGGTTATTAAAATATTCTACCGATG GTTGTAGCAAATTTAAATCCGGCTGAACTTCGTGTAACTTTTTGTAAAGA GTCTATTTTATTGTCGTTTTCTTTTGTTCTGCTTTTGTTATTACATTTAT TTGTAATCTTTTTTTAGTATTGGCCGTATAGTAGCCAACAATCCATGGCC AGTCATCTTGATCGCATTGACAATCTCAGGTTTATGTATGGTTGGAATAA TCGAGCTACAAACTGAAAATCGTGGTGAAAAAAATTGGGTATCTCAAACA TCAGATCCTGTCAAACACAAAGAATGGGTGGACGATGTCTTCCCAATACC ATCCAGAACCTCTAAACTTCTCTTGGAGAAGAAGGATGGATCGGATCTGT TGACAAGAGATGGACTTCTCAAACTTTATGAAGAAGACCAGAAAGTGAGA GGGATGTTGTTCAATGAAACTGGATACCAATGGCATGATATTTGCTACTC GTAAGTAAACGTTTTCTTAAGTCAGATGGTTTGGGTTGTTTTTGTCAggg atattttattttgttcagAGAAAAAAGTCCAATAAGTCCAAGAGTCccat aaggacgaaatgcatatgctgctctgtcACCCAAATCTCCTTAAAAAGAT AGTTGGACACAATTTacaatttgaaatctctaaaatttTGTTCTAATACG AttttcttacgttgaaattctattgttttcttgattttgggTAAGAATTA GACGAAAAGATATTGCTTAGGACCATTGATGACATCTACAAGCAAAACAT CTCAAACTATCTGATTATCACTTAAACGTACTTTTTTAATGAATACCCAA CAACTGTTAAAAATAACTACTGAAGTAGAATCTGTGTATTTCCAGCAACT ATTTGTTCGTTTTGAAACTAatctagatttttcactggTGTAATTTCCAA ATTCGTTCATCAGGTTGGAGTCTAGTAGAGTAGAGTAAGACATTTTTCAA TTAAGTTTGACATTCACATATTTTTGGCTAACCCATAATTAGTTTGGCGG AAAAGTCCCCTGTTAGTGATAAACTATCATAAATTAGCAATAGGGTTGTC GGCAATCTagatttttcactgtttttaaaaatttaaattcttgtTTACAG AGCTTCAGCAAGTGCAGACTGTATTCCCGCATCGATCCTAGAAGTCTGGA GCTACAATCGCActattattgaaaatttaacagataaagaaataaaatcc aCTATcaataaagggggattgttGAGCCCTATGACTGGCCGTTTAGTGAC GGTAGAACGACTCATTGGAGGTCCAGTTGTAAGGGACAATGGAACCATTG TGAAAGCTTCCGTATTGAAAGTCGATTACAGATTGCAGAAGCAAGATATC TTTGACAAAGGAAAGGGACGCGACGTAAGCACTTTTAGACGACTGGTTTT CAATTCCAGTGCCTTACGGCACTTACCTTACGGCCACAATGGAATTACGG TTCTTTTTGACGGATTCCTTTTAAATACTACGgaatttcaacaattttta gAACCTTACATCTTAGAACGGAAATAAACATCTTCATTAAGGCGGTACAG GAGTGTCCAGAATAGTCCCAAAACAGGTTAGAGTACCAGGGAAAAACTTT GACCCTTTTGTGACGAAATCTCCCTTCATTTCTCAGGTCGACAAATACGC TGATAAATGGGAAGAAGAACTAGAAAAAACATTCGAGGGTGGTCAACCAG ATTATGAAGTTTACACTTTCTCACAATGGTCACAAGCGAAGGCTTCGGAA GATGCTTCTAATGGAGATTTACAGTTCTTTGTGATAGGCTACATCATGGT CATAGTCTACCTATCCATCATGTTGGGGTCTTTCTCACGAATTGGACACA AGGTTCTGTTGGCACTGGCTGGAATCGGTGTCATTGGTATCTCTATCGGT ATTTCGTACGGTCTGGGGTCCGCTTTCCAACTGAAATACACTGCAGTACA TAACGTGTTACCGTTTCTTCTACTTGGTATCGGTGTTGACGATTTGTTTG TCATTGTTCAAAGTTGGGATAATATTGGAGGTCCGAAACGCGATCATCGC TCGGTTGAGGAAAAGATTTCGTTGGCTATGCGACACGCCGGCGTTTCCGT TTTGGTGACGTCTGTTACTGATGTGTGTGCTTTCTTGATCGGAGCCGCAA CCGTAagtgaaatgaaatgaaatcaaTTTCAGATTACAGCGAGATTTAAA GCCTTTTTCTCACTAATTACACCGGCATACTTTAGTGCTACcaagtcatt tttttctgtgtGAACGAGATATTTAAAGAGAAACTCCGATCTGTTTCTac actttttcaattttgaaatcagtATTTTACTatagtgtgtcccaaaaaag cgATAAAATTTTTTACATAAAGTGAAATCCTCGCTTTATTTCAGATTTAA TGACTTGTATAAAACATACCATTTCATTCTCCACAACCTTTTaatcatct tgggaattgaataacGGTTGATAAAACAGAGAAATTGTTATGTTATTTAA ACCGACTTTAAATAATGAGTATTGAGCATTTTACTAAATCTAATCTTTTT GGGACACACTATAATTATAACGACTTCTCAATCTGGAACCTTATATTTCA ATCTGATAAAAATAATGCATTTGACAGTACTAAATTGATTCTTGTCTACT TCTTCTTAAAATCGTATGTTTTCGCCCTGGTTGTGTTACATGCAACCATT GAGCACTCATggtgaatttatttattcatacatacttgaatttcaaaatc aaaagaaattcatcCCTTTCTTCTTTGtgattttattctttcaaagactg gtttttaatttttttctcttcagaTCTTACCAGCTTTACGGTCGTTCAGT GTATGGTGTGCTATTGGCATCTTAGCTATCTTCTTATTGACTATCACTCT CTTCACCGCTTTGTTGACTTTGGATGCCAAACGACAAGAGAAAGAACGAG ACGCTTGTTGCTGCTgtttgaaactttcttcaagTTACGAGCCACCGAAA TGCTCAGAAACCAAATatctaaaaggttttttgaagaaTTATTACGCGCG TGCTCTTTTATCAACTCCTGGTAAAATTGTCGTTATGGTGGCCGTAGCTG GTTTATTGGCAGCTGGACTTTATGGATTAGTTGGACTTGAACAGGACTTC GATTACGCCTGGTTCTGGCCGTCTGATTCAAGACCAAGAGTGTTCATCGA GAAAGACAGAATTGTAAGTATAAGATTTGTTATATATTTCTTTGGTCGCC ATTGCGTAAACTTTGTATTAGGTTTTTAAccctttttttgtttgttttct tgaACAGAATTTATGCAATTTCCTTTGTGAAATACCAAGGTAACCTTGGA AATTACCCACGGCTACCTTGAACAAAGCAAATCATTATAAATCAATTATT CTTAACTTCACTATGTAAGACGAATAAACATTGCAACAAAAGAGCACATT CGAGTAAAATCTGATTCAAAAATCTGAATGaatcatggcgttctaaatct attTAGAACGCTATGGAATGAATCTAAAAAAGACTAAATTATCCTCATTC TCCCCTTTTTTATGTAGGCATTCCCTGGGAACGGCGTCCCTGGAAACATA TACATTGGTCGCATCAACTACTGGAGAGACGGACATGAGCATTTGGGCAA AGTGAAAGAAGCTTTAGAGAGTGATAAATACGTTTCTGAAGGCACTGTCA ATAGTTGGTTTCATCAATACCATGACTGGCTACGTTTGAACCATCCAGCT GATCTTGAAGCTGGATGCACCGAAACCTGTAAAGTGAAGAACGAAGAACG GTTTTATAAGTTGTTGGATGAGTTCTTGAATGGCGATGGCAAACTCTATA AATCGTTGATTGATATTCCAAGCAGTGATGGTCGTATTAGAGTAAGTAAA CTTTCATTTCACCAGTCTTGttgatcaaattttaaagcGTCTGTTGAGAT CTTGAGAAATCTTAAAGAAACCTTTGTACAATTTGTGGCAATTATGATAA TTTTACGGAGGGATGAGAATTTTAGAAAGCATTTTACGAAGTATCCTCCG TTACTgaactgagaattagttcgaattatagaaatatatACGAGAGTCTA TAGTGGTTTTTTATGAATTGCGTCATAAGTACAATAACACTTGGCTCGTT TTCGAAACATCGTTTTTAACAATTGATTCCCATCTCTACACATTACCAAT TTAAAGCATGATATTCAAATATCGATACTGTGCATGACACGAGAAAATAA TTGTATTCTCTATTAATTTTCAGGCCTCGAAAATTCAATACACGCATCGT CAATTGGTTGGTTCAGACCAGCAAGTCAACGCAATGGACTCAATCACGGG AACAATTAAACCTGGGTTTATCCCTGATGGTGGAGAAGAAATCCTCCCTT TCGCGTTCACTCAAAACTATATCAACTGGTCCACTAATAAAGTCATCAGT CAAGAACTGGTTCGAAACATTGCTTTAGCTGGAGTTTGCGTTCTCTTGGT GACTTTGTTTTTGCTTTCAAATGTTATTGCATCTGTATTGGTTGTAGCTT GTGTTGCATTCTCCTTGATCGAGATTGCAGCTTTCATGGGATTCTGGGGT TTGACAATCGATACTGTGACCACAATCATCCTTGTCATCGCCATTGGATT GACGGTCGATTATTCAGTCCACATTGCACATGGTTTCATGGCATCCAGAG CTGGTGGTCGTAACGAACGAATGACTGAAGCATTATATGAAGTCGGTCCT GCTGTCTTTCATGGTGGATTTTCAACTTTCTTAGCTTTTCTGTTACTTTC CGCTTCAACGTCGTACgttttcttgacttttttcaaagtatttttcCTTG TGGTGATTTTTGGTATGTTTCATGGGATGGTCTTTTTACCGGTCATCCTA AGCTTGGTTGGACCGGCACCTTACGCTGACCACGCCGCGGAGAATTGCGC TGCGTCGCCACCCGTAGAGAcgccaaaacaaaatggcggacatTCTACTG CAGAGAAGGATCATGAAATGAGGGTGGTTATCGATGGTAATGAGAATACT GGTTATGTTaaagaataaaacaaattattttattaaaagacaCACACTGT AAAATTTGATGCCGTTCAAAGAGAAGAGGTGACAAATTCGAGCATAGCAG GTTGAAAAGTTCTCAAGAAGTTCTTTTCCTTCCCTTTTAATGAGACGGTT TTTGCCATTTGAACCGATACGCAATGTTGCAGCTTTTCCTCTGTGTATGG AAAGTTTATATGTTAACAGTTTCATTTACTTTAATGATATACATTTGCGA GATTTCATACTTTTTCCAGTTTGCCAGTTTACTAAAAACGCTTCACATTG CCCTGAAGATTTACATTAATGGTTTATACTTTGTAAATAAATATGCATTT ATTTTGATTGTTTTAGTTGTAAAATAAATCTCCTATAAACAAAATATTGA TCAACCAAGCTGATTTTGAATGTCGGTGCCATATTTCACGTCACGTCCCA GAGCTTCGCCCAAAAACTAACCTTTTTTCTCCAAAATTTCATGTTCTTTC CCATGGTAGCTACGAGAGTTCTGGAAATCTCTTAGTTCCGGAGATATAGG CCGGTGAAACTAAGTCCCGGGCGGGACGTCACGGACTGAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00035292TCONS_00035292Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00035292-proteinTCONS_00035292-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001287supercontigsc0001287:21262..28151 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.61 0.73 0.6 0.51 0.66 0.41 5.67 9.82 16.44 21.18 27.11 24.73 109.01 79.04 7.04 73.25 10.82 33.19 35.45 83.42 3.3 3.23 5.62 4.52 1.38 1.37 81.16 27.72 1.18 0.92