XLOC_040681 (mRNA) -

Overview
NameXLOC_040681
Unique NameXLOC_040681
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000350_pilon:257610..258761-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040681 ID=XLOC_040681|Name=XLOC_040681|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1152bp|location=Sequence derived from alignment at sc0000350_pilon:257610..258761- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTCCTTCTAAACCGGCTCTTAGCCGTAACGTTGATGGCCATGCAGGT CCATAGTGAGGACCCCGAGGAATGTGAGCAGAACTTTGAATTCAAAGCAA GCGTGTGTAATAATACGAATGGCGGCAAGCCTCAAGGCTGTTTCTATGGA CCACCAAAGAATATATCACATTGTGAAGATCTATCAATTTCTACAATCAT CAATGAGCCTTATACTACATTTTTCTTCCCAGGTAAGCAGAGTAAATATG GAAGTATCTGTTAATTATATAGTAAGACTTTTATCACTTTTATCTCTTTA GAAAGTGAAATAAAGTAAATCCGTGACATCTTTCTCGAAGGAGAGTTTCA GGGGCTACCTTATTTTGCTATTCCGTCGAATTCCGTAAAACAGTCCAAAT AATAAAACAGAAATCTCCATAACACTGAAAATTTTTTTGTGAAGTTCTAG ATTTTCTACCTACTAATTTGACCTTTTTTCTTATTCCGATATTCCGAGTG ATTTTCTTGCTAAATTTTGCTTCCCCTGACTCAGTTTCCAGCAATAAAGT TTATTTCTGAAATAATATTCAAATTTTCTTGGAAAAAGGCAGATTCCACT TCTACCACCAAATTTGATGAATGCACCTTATTCAAATGGCTCCAAAATTC TCTCCAGACTATCAAGACATATTTAAGGGATTACAAAGTTACAGTTTATT GCAAAAGTTAGGTCCATCTAACTTTAGACATAGAGCTTGACGTCAATCGT ACTTTACCCGACAGAATGTCAAAAATACCGGCCTGTGGTAACTATGAGAC TAAATGAAAACACTCCCATCCACTGAGCCCACGTGAATTTCTTCATTTCT TTATTGTAGAATTTATGGATATCCTTATAATAAACCAATGTTGTGGTTGC CTCAACTTCACTCAAATATACCGGACAACCTACAACAATACAACAGAATT CCTTCAACGGAAAAACAGCGGAACTAGACCCGTAGAACGAATCATATATC CGGTCTTAGGTGATCCTTCACAGAAAAAGTATTATGGAATGTATTTTGTA CCGATGTATTATCTGGAAGAAGGACTTCTTATCACTTTGAAGAAAACTTC TGGTGAAATTGTCACTGATCTGTTGTTCCGAATCGCTGGCTTGTGGCCAC TG

Coding sequence (CDS) from alignment at sc0000350_pilon:257610..258761-

>XLOC_040681 ID=XLOC_040681|Name=XLOC_040681|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1050bp|location=Sequence derived from alignment at sc0000350_pilon:257610..258761- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTCCTTCTAAACCGGCTCTTAGCCGTAACGTTGATGGCCATGCAGGT
CCATAGTGAGGACCCCGAGGAATGTGAGCAGAACTTTGAATTCAAAGCAA
GCGTGTGTAATAATACGAATGGCGGCAAGCCTCAAGGCTGTTTCTATGGA
CCACCAAAGAATATATCACATTGTGAAGATCTATCAATTTCTACAATCAT
CAATGAGCCTTATACTACATTTTTCTTCCCAGATGGTCCTTCTAAACCGG
CTCTTAGCCGTAACGTTGATGGCCATGCAGGTCCATAGTGAGGACCCCGA
GGAATGTGAGCAGAACTTTGAATTCAAAGCAAGCGTGTGTAATAATACGA
ATGGCGGCAAGCCTCAAGGCTGTTTCTATGGACCACCAAAGAATATATCA
CATTGTGAAGATCTATCAATTTCTACAATCATCAATGAGCCTTATACTAC
ATTTTTCTTCCCAGAATTTATGGATATCCTTATAATAAACCAATGTTGTG
GTTGCCTCAACTTCACTCAAATATACCGGACAACCTACAACAATACAACA
GAATTCCTTCAACGGAAAAACAGCGGAACTAGACCCGTAGAACGAATCAT
ATATCCGGTCTTAGGTGATCCTTCACAGAAAAAGTATTATGGAATGTATT
TTGTACCGATGTATTATCTGGAAGAAGGACTTCTTATCACTTTGAAGAAA
ACTTCTGGTGAAATTGTCACTGATCTGTTGTTCCGAATCGCTGGCTTGTG
GCCACTGAATTTATGGATATCCTTATAATAAACCAATGTTGTGGTTGCCT
CAACTTCACTCAAATATACCGGACAACCTACAACAATACAACAGAATTCC
TTCAACGGAAAAACAGCGGAACTAGACCCGTAGAACGAATCATATATCCG
GTCTTAGGTGATCCTTCACAGAAAAAGTATTATGGAATGTATTTTGTACC
GATGTATTATCTGGAAGAAGGACTTCTTATCACTTTGAAGAAAACTTCTG
GTGAAATTGTCACTGATCTGTTGTTCCGAATCGCTGGCTTGTGGCCACTG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_040681XLOC_040681-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000350_pilongenomesc0000350_pilon:257610..258761 -
Properties
Property NameValue
Aaloc235-525:292
Aaloc1-231:1153