XLOC_020164 (gene) - C. hemisphaerica

Overview
NameXLOC_020164
Unique NameXLOC_020164
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001209:2621..8764+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_020164 ID=XLOC_020164|Name=XLOC_020164|organism=Clytia hemisphaerica|type=gene|length=6144bp|location=Sequence derived from alignment at sc0001209:2621..8764+ (Clytia hemisphaerica)
CTAGAATGCTACTTCATTGACGCTCCAATAGCATCTCTTTGTTTGAAAAG
ATTTGATTTGAACCAGCTATCTTGGAAGTATCAATTCTAAGAAACCATTT
AAGTTTGAGGGTGTTATTTTCATTTGTACAACATACTCAAGATATGCCAA
AAAGTTAGGAGGATAATGCTCAATACTGTTTTTTATGTACAACGCTCTAA
TAGTATCCCTTTGTTTAAAACAAGGCTAGCTTCAAACCAACATCTAGTTG
AGTGACAATCTATAATATCATATATTATTTAATTTCTTAGATGGAATGTG
CTATATGCTCAGACAAGATTGATGACAAGGataaaaaatttaagttaata
cctgacaaaataagaaaaattaatcCTTATGTAGAGATACAAAAACTGGC
GGTAGAAATTGAAGTGAAATCAGACCACATATGTAGTAAGTGTTATTGGG
ATTAGGGATCTATAAGCAATTCGCGAAAAAAATGGAGAGGGATGTAAACA
AACTGAAAAATGTTAACATCAAATGGAGAACTGGACTTGAAACCACAGTT
GAAGTTGTAGCAGAACGTAAATttgaagaaatcaaaatcacACAAGGTAA
CTTTACAAGAAAGACCTTACCACCTCAACTAAAAAAGCTTGGCAAATCGT
TGCTGTACAGTAGATTGAGGGAAGTGTCCAAAGCAGCATTCGACACACCG
GTATTGCAAATTTCCCTGAAAGAGAACTTTTGTAAAATCCTACAGAAAGG
AAGTGAAGGGTTGTGCAACAAGAAAGACCCATCCATCCttagaaaaactt
caaaagatgaCATTAAATCCTTTAATCTAGTTAAGTTATACGAGAAATTA
TCAGTGCGTGCAccatttttggtaaaagttttgAGTTTGATTTGCTTCAA
TGGATACCAAGCTAGACATGATCAGGATTTGCATATACTTGCAGTTTGTG
TAGCAGCTGCAACACTATTAAAGAACAGGAATCAATAAATGAATGCAATG
CAAGTAATGGTGAATAGTATTGTCCAACATTCCAGTTTAACAGTAAGTTA
CTGATTTTCCCGTAATTATATACATACTCTTTGTCTTCATGaaatgtatt
ttcaaaattcacagAATGAAATTTGGCAGTTTATAagtattcaaaaaatt
aaacatcATTTTAGCCTCTCCACAGTAATTCACAAGTTACTTTGtaataa
ttttcaaacattttcttcagGGTTGTGTTAAccgtttgaaatttttgaaa
ctaaCAACGTCTTTAAAGACATACTATAGAAAGATGAATGAGTTTGGAAA
AAGACTTTGACGCTGATGTGAAAAGGAGGGTCGAAATTGAATTTGGTTGA
ACGACATGGTTATGTACCAAAGAAGAAGGTGAAAGTGGACAAAACAATCC
GTATGGTCAAAGAACCGGTCACCACCAAGTTAGATGAAGATGTACCAATG
GAAGTTGTACAAGAGGAACCAGTAGAACATCAGTATATtgggaaattcaa
aattttagagGATAAAGATGAGACAGCACTTGTATCCAAGAGTGTATTGA
AGGAGGTTAGGAATGCCCATACTTTATAACAGAAATGATTGAAGTAAATG
GATCAGGAAAGGGAATCTACTTTTCTTTGCTCACCAAACCAGTATAATGT
CTTCTagaattaccttaagggaagaaatttaggCGGAAAAAGAATTAAAT
TTATAGGTCATTTGCCAAAATGAATTtgcacgaatttttttcatttaagt
ctTCTTCccgatttttcaaattaaatattCACCAGAAATAGGTCTTTCGG
CAAAATTAATTCCTgctaaatttagaaattttattaaaaatatattGCCA
AGATAAATTACACCAAATTACACCGAAAATTGACAcattgccaaaatttc
ttttcttaaagTACATCATGGAACCAGAGGCTGATCTTACGTCGCTTACA
GCTAATCAGATGTTGGGTCTATTGAAGACATTTAAATGATGGATATCATA
ATAGTAAtaaaaggtttttgtttttaagttgAAACTTCACAACACGTCAG
TAATTGAGCCTGAAGAGGAAATGGATGAAAATGAAGAGACTGATGGGAGA
AAGGTAGTCATTGACAATTTCGACTTCACAACAAACGTCAATGATGAAAC
AGAAAGTCATAAAAACCAGGTATATGTATATTATCTACAGATATGTAGTA
TATTTTTCTATTCCTAAAAACTTTCTGTATTANCTCATAAAAACCAGGTA
TATCTATATCTACAGATATGTAGTATATTTTTCTATTCCTAAGGACTTTC
TGCATCACATATCTAATTTAGAGagattttttctaaattctacACCTTAT
TAAAATAACAATGTAGGCAATTTTAGGAAATcttcccaaaatattttttc
ttcgttcCTTTacatattatatttttcaagaattattacAATCATTTGac
tcaaaatatttcataacACTTTTCTACTGcaaaaaattgtgatttttaaa
taaatttaaattctgAAGGATTTTCACTGGGTTTCACGGATGGCCACAGA
AAATCGAATGGGTTTTCCAGAACTGTCAACTGAAAACGATCGATCTGTAA
AGACATTGGAAAATGGCTGTCTATTACCGCAAATCTCAGACCACGTCAAC
CAACGAAAAGATTATGTTGCACTGGTTGCTCGTGTCATTGTGAAACACTT
GAAATGCttggaatttttgaaagatGCTGTTGTGAATCACATTAAACACA
AATTCTCACAATTGACAACAAAAACCAACAGAAACAGTCTGTTTTACATT
AAATTTCTATCAGTCAATTGAAACgtgatattttttaagtttaacgAAAG
GATACCTTTGTTATCTTTGGCAACATTTAACATTAAAATTATCCTTGttt
ttcaaacaataaaaatcataattattacaaactttaaatgtctttcaaaa
atttaatttagacTTTTCTTGGTATGATTTATCAAAACGAAGATGAAAGA
GTGTCTCAAACGTATCCAAGAAAACCAACCAAAATATGAAGATGATGGTG
AAATGGTGTATGGCGATCAAGGAATAGTTGGATATCAGGTAAGCTTTTag
caattgaaaaaaaaaacagcaattTCGTGAAATTTAACCAGAACAATTGT
GAAATTAAGTACCCCTTATTAAGTACACATGAGAATTTATTATATTACCC
ACGAAATTTTAGAGAGTTAAGGTATATGTAGAAAGTCTTTTTATTTgtct
tatttatttcttactTTGTAGCTCACAGTTGAACGTGCTGCAAATGGCCT
TGATCAATTAAGAAATGGTTTCACTGCAGAGCAAAGATGTGATGGTCTTC
ACGTGGAAGTTGTCGATTTTCACACCTCAATGAAGCTATTACAGGTCTCA
TTTTCTCTCTGTATTGCTTTAGTTTACATACCTTCTCTCTTTACCTATAA
TTGTGCTTCCCTTTCAATTTATATTTCaaagatgttttgttttttaaatt
aaaaatgtaaCGTGAGCTTACTTGCTATTGCAGTTGGGTTCCCTTTCATC
TTGTTCTGTACTTGGGATTGACAGGTAAAATTAATGAACCATCAATTACT
TTGTCATGTCATCTCATTGAAATCTGGGAAAAAATCGTATAATGATTATG
TTCTCTTTTAGCTTACTATGGNTATCTCATTGAAATCTGGGAAAAATCGT
ATAATGATTATGTTCTCTTTTAGCTTACTATGGACAGGTTTTACCAATCA
AAATCGTCGACAGATAAGTGTACGTTATACTCTGATAAAGTCTTGATCAA
TCGAAAGAACTTGAAGAgtgacgtcagcaaaaactaTAACCATTGTAAGA
AGTTTGTCCAACTTGAGCTTGAGGCAAGGATAGTTGCTGCAGCATGCCAA
GAATTTGAAGTAGAATTCTCAACCAATGCGTTAGACCATGAGGTAAACAA
AATTGTATGTCTCATTCTAGAATGGATATTATACCTGTGTTTTAAACTTG
GAATTAGAAACtcttaatttgatattttcaatattttttaagagctattt
tttttagagtcttcagggtgtgatacctcaccctcttggattttgctgaa
atttagaccaaatgatctatcacacaagaaaataagttttgaagatacag
cgtctcaaaggTTACTAAGCGatattgacacctaaaaattatgaactctg
gtgggaagcagattttgaaagccaataaattttaattcaagtacattaga
aagctgatttacagtggatttcaagaactttttgtagggaatcagaaaaa
atcaaattgagtctccaaaattttccccgaaaatctctagcacctcctgt
agagggcttcaaactttgcgtaatctaggtttggaagcacttttagctgg
ctgctgatggtccttgggacttttttgaagtaaacttttgacctggagtg
gtttaatggtgggttttggccatcTTTGCataaccgtcaaaaatggccga
aaagaTTGCTATTTTGGTAggcctggagcaaaattcaagatggcgtttct
ttttaaggcaacaccaaacttttttgaaactttcagcaaggcttccttag
taggtctagtttatagcctcaaaaaatctcagtgggctTTTGAAGTCTCG
taaagattgaaaatttgcttaacttcgttgttttctccctcttaaaatgc
taaatcaggcccacttaagggctctaacaggataatttttgtcaaaatat
tggttgATCTTCTCTAGCCAACTAATCATTGGCATTAGGCGAACaactga
aaaagatttcaggtcatttccatcaacagatgacattttatgactgtttc
tttatttttaagtacataagcaggttacttcaaTTAAATGGGttaacagt
acttaattcctattcaaaaactttttagactcattcagaaatcctacttt
gacaataatttgcactttaccgcaaaatttctaaatccAAGAgagactgt
ccaatatttttTGTTAATGATGAGGGACTACTAATAGTTGTTATCGACCT
AAACTGGTTAAAAAGGATTAACTATCATACATTCAGGATTGCTGTTATTT
TGCTGTTTGGAAGTTCTGCTATATGTTACTTAAAAAACCCAGCTTTTCCA
ATTCATCTCAACATTTTGTTAGGCgaatataaattaaatttttgccaaca
tttttatcattcagcattaaattttgcaaaaggatgaaatcaataattct
ttttAGATACAAGGATGACGGTGTACTGCGCAGAAAGCATGAACTTACCC
ATAATGGTTTTGTTTACGAAGAGCCATCTAGAGCCATCAAGCCAGGTCAA
GTATGAGtcaaatgatgatgatgatgatgatatgtGTAACTATCAAACTT
CTTTTATGCAGTTAGCCATGGTCATCTACAACTTTCATGACGCGATATCT
GAGGGAGATGGGGACAGAATTCTGCGTCAATGGAAATTCATGCTTCTGTT
TTATAAAGCAGATGACCCACACAGCTCGAAATACTGCGTTGAGGCATTCT
ACTTACTGATCCAATATTACGCTCTCCTGGCCCCACAAACTGCTGAACGC
CTGATTTGGAATCGCTTTTCCAAGTCGGTTCATGGACCAGGAGGAAATAT
CCCATTGGATATGGCTCTGGAACACTTcaataaaatcctcaaaaacgGCA
TACGAAACATGGGGCCAAACAATTCAAGCCAAAAGGCAGTAGATAGGTTT
TGCAAAGCCCTTGTAATTGCCTTGAATATTAACAAAGCGATTCTTGAGAA
CTTTGACTAAACTTGTAAATGTTGGCCACCATCGCGAAATCAAGGCAACA
GATGAACTTTTACATCAGAAAGCCTTGACAGTCTCCAGTGAGCCAAGGCA
ATACAATTTCTTCAAGGCTCTTAGCCCGAGTTTGCTGGACCAATTCAACT
TCCATAAATTGTATGAGTGGAttgacaacaacaaaaaaacatcaTTACTC
TTAGAGCCGCAAGATAGACTCATTCTTTTCATTTATTCTCTGAAATGAAA
ACAACGTTAATATTATTATTTCTTAGAAGCAGTGGTACACGTTTTtatta
agaaactagttttatcAAGCAACcttaatgtttcttaagaaatc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00034700TCONS_00034700Clytia hemisphaericatranscript
TCONS_00034701TCONS_00034701Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00034700-proteinTCONS_00034700-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001209supercontigsc0001209:2621..8764 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.05	0.13	0	0	0.31	0.26	0.11	0.19	0.27	0.25	0.29	0.13	0.14	0.22	1.23	1.43	1.53	1.46	1.43	1.29	1.29	0.94	0.51	0.75	0.27	0.14	1.26	0.62	0.95	0.92