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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000253_pilon:504984..507839- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_031842 ID=XLOC_031842|Name=XLOC_031842|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2856bp|location=Sequence derived from alignment at sc0000253_pilon:504984..507839- (Clytia hemisphaerica_ch_hm2_pilon)
GTCTTCTTCGTACCAGCAAAGAGAGGCTCCTCTGGTCGCCCCTACGGAGG
TACAGCCATGCTTATCAATAAAAACCAAATCAATAACAAACCGGAACACA
TCCTTGATGAAGACTATGCAACAGTAATCAGAATCAATACATCGCAAAAC
ACTTCCTTACTATTAATCGGTGTCTACCTCCAGTCAGTTAACCAAAGCCC
TAACCTCAAAGAAACCTATAATGCACAACTCTCAGCTCTATCTGGAGTAA
TATCTCACTTTGAAGACATCTCGGACATTGTTATCTTTGGGGACTTTCAA
AGTTGCCCACAAACCTTCGAATCAAACAGACTCAGTCGCCCAAACGTTCT
CAGTGACAGTCTGGACAACTTCCTCGACCGCCAGGCCCTGACCCCTACCG
ACATCACCCATGGCACAGGCCCTTTGTACACATACAGTCACCTAACTCTT
GACAATAAATCTTATATTGATCACATATGTATTTCACCCAATCTCACACA
AGCTGTCTCGGATACCAAAGTTCTAGACCCTCATCATCTTAACACAGGTG
ACCATTTACCAGTGACGACAACATTAAAAATGTACTCTTCAATTGCTGAC
CTCCCTGATGCTGAACACACTGACGATAACGACTTTGTCCCTACTTACTT
GTGGACAAATAAAATCTTTACTGAAAAATACCAAAAGACAGTAAATGATG
CTATTTCAGAGTACAAGAACCAAGGTGTAAACATTGAAAATGATATTTTA
TTTCTTCATCAAACACTTAAAGAGAGTGGAATAAGAACTGCCTCTGAACT
ACGTAAGGACAATTCTTTCCATAAAATAAACCCAAAACCTTGGTGGAACA
ATGAACTTTCCAAGAAGAAAAAAACTCTGCAAACAATGTTCAACGCATGG
AAAGAAAAAGGTTTTACCAAAGATACAAAAAATACAGAATTCAACCGTTA
CAAATTAGCCCGTAGAGACTTTCGTATCCTAATTAAAACCTGCAAAAATC
AAGCAACCGCAGAACACTATGTGAAACTGGATAAAATTAAACATTCAAAC
CCAAAATCCTATTGGAAAAACATACGTCTAGCAAAGGGACAATCACAAAA
GCTATATACGATCAATGGCAAAACATCAACACAAGATATAAATCAAGAAT
TCAAAAACCACTTCGACAAACTCTTAAACACGCCAAGAATTCACCAGATT
GACAACAATGAATCCAACACTCAACTCCAACATATCCTCGAAGATTTGAT
AAATGACCCATCTGATGATTTCCACGTGATTAATACGGAGGTTCAGTCTG
CCATAAAAGAACTAAATAAAAATAAAACAACAGACCCATACTCAATCAAA
GCTGACCATTACCTTCACGCTGTAGATGAACCTTTTCTATCCTTCATTAC
CCAGCTGATCAACGATATTATAAAGTCTGACGTAACTCCAACATTACTTG
CCACATCTCACATCGTCCCAGTGATCAAGTCATATCGTAAACCCCTTAGC
GACCCGAACAATTACAGAGGCATCAGCCTCATCCCTATCATCACTAAACT
CATTGAAAAACTTATTCTGCTCAAATGTCCGAATCTCAAAAATCACCAAG
ATGCTCAATTCGGCTTCACGTCTGATGGCTCCACCACGCACGCGGAATTA
CTACTGAGAGAAACTATTTCCAAATACAACAACGAGAACACTCCAGTATA
TATGTGCAGTCTTGACGCTGAAAAAGCTTTTGATTGTTGTAATTGGCTGG
CACTATTTCAACATCTTATTGATAAAACCACTTTACCAAAACAGGTCACC
CGCTTTCTAATCGACTTGTACCTGAAAGGAGAAGCAAATGTCAAATATAG
AAATCACTTCTCAGATACGTTTCGTTTATCCCAAGGAGTTAGACAAGGGT
CAATCTTATCGCCATACCTGTATAACCTCTACACCGAGGAGATTATTGAA
AACATCCACAATCTCAAGGTAGGGACGCAACTCGAACAATCTCTGAACAC
TTCAATAATAGTGTTTGCGGACGATATCATTTTACTCAGCCCGACCCTCA
AACAACTTCAAATTATGATAGACACCTGTTTCAACTATGGCCAGAAGAAA
GGCATCAAATTTAACACAGACAAACAAAAAACTCAATTTTTGATATCTGG
AAAGCACCCATTTCCTAATCCAACCCTAAATCTAAACGGTGAAACCATCC
ACCCTCAAACCAACCTGAAACACCTTGGATTTCAATGGTCAATCAAATCT
CGACATCTTTCTCTCTTAAGACATTTTGAAGATCGTGTCTCTGAATTATG
GGCAGTCAGTTCATCACTCATCTCTTGTGGTATCCGGAAACTACATCCAA
GCTCGATTGTAACACTTTTCAAATCAATAGTGATCCCTAAGGTACTGTAC
GGTCTGGAAATCACTAACTTGAATGTAACGCAAAGTCAACTACTTGACCG
CCAACTTCGCTCTGCACTCAAATCGTTGATGGGACTCTCAAAGCACAGCA
CCAATGAACTTCTGAAGTACTTTAACTTGACTACAGTTACAAACCTTCTG
AAGCAACGTAAGATCAATCTTGTAAACCAACTGATGAAGAATCCAATGAC
ATCATCTTACTTGTTCTCCATTCTATCTCAACCAAACCGCTCACACTCGT
TGATACAAGATTTATTAGACACCTGTCAGTCGGAGGGTATCAATGTGATC
GACCTCCTGCTAAGCCCCAAGAAGCACAAGTTGACCATGGTTACCGAAGA
TAGCTTGGACCTGGAAACTGAAACTAGAATAAAAAACATTCTTGAAAATT
GGTCTGTCATTGAGAACAGACAAGAACTGAAAAATATGCTTACAAGATAT
ATATAA Coding sequence (CDS) from alignment at sc0000253_pilon:504984..507839- >XLOC_031842 ID=XLOC_031842|Name=XLOC_031842|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5712bp|location=Sequence derived from alignment at sc0000253_pilon:504984..507839- (Clytia hemisphaerica_ch_hm2_pilon)
GTCTTCTTCGTACCAGCAAAGAGAGGCTCCTCTGGTCGCCCCTACGGAGG
TACAGCCATGCTTATCAATAAAAACCAAATCAATAACAAACCGGAACACA
TCCTTGATGAAGACTATGCAACAGTAATCAGAATCAATACATCGCAAAAC
ACTTCCTTACTATTAATCGGTGTCTACCTCCAGTCAGTTAACCAAAGCCC
TAACCTCAAAGAAACCTATAATGCACAACTCTCAGCTCTATCTGGAGTAA
TATCTCACTTTGAAGACATCTCGGACATTGTTATCTTTGGGGACTTTCAA
AGTTGCCCACAAACCTTCGAATCAAACAGACTCAGTCGCCCAAACGTTCT
CAGTGACAGTCTGGACAACTTCCTCGACCGCCAGGCCCTGACCCCTACCG
ACATCACCCATGGCACAGGCCCTTTGTACACATACAGTCACCTAACTCTT
GACAATAAATCTTATATTGATCACATATGTATTTCACCCAATCTCACACA
AGCTGTCTCGGATACCAAAGTTCTAGACCCTCATCATCTTAACACAGGTG
ACCATTTACCAGTGACGACAACATTAAAAATGTACTCTTCAATTGCTGAC
CTCCCTGATGCTGAACACACTGACGATAACGACTTTGTCCCTACTTACTT
GTGGACAAATAAAATCTTTACTGAAAAATACCAAAAGACAGTAAATGATG
CTATTTCAGAGTACAAGAACCAAGGTGTAAACATTGAAAATGATATTTTA
TTTCTTCATCAAACACTTAAAGAGAGTGGAATAAGAACTGCCTCTGAACT
ACGTAAGGACAATTCTTTCCATAAAATAAACCCAAAACCTTGGTGGAACA
ATGAACTTTCCAAGAAGAAAAAAACTCTGCAAACAATGTTCAACGCATGG
AAAGAAAAAGGTTTTACCAAAGATACAAAAAATACAGAATTCAACCGTTA
CAAATTAGCCCGTAGAGACTTTCGTATCCTAATTAAAACCTGCAAAAATC
AAGCAACCGCAGAACACTATGTGAAACTGGATAAAATTAAACATTCAAAC
CCAAAATCCTATTGGAAAAACATACGTCTAGCAAAGGGACAATCACAAAA
GCTATATACGATCAATGGCAAAACATCAACACAAGATATAAATCAAGAAT
TCAAAAACCACTTCGACAAACTCTTAAACACGCCAAGAATTCACCAGATT
GACAACAATGAATCCAACACTCAACTCCAACATATCCTCGAAGATTTGAT
AAATGACCCATCTGATGATTTCCACGTGATTAATACGGAGGTTCAGTCTG
CCATAAAAGAACTAAATAAAAATAAAACAACAGACCCATACTCAATCAAA
GCTGACCATTACCTTCACGCTGTAGATGAACCTTTTCTATCCTTCATTAC
CCAGCTGATCAACGATATTATAAAGTCTGACGTAACTCCAACATTACTTG
CCACATCTCACATCGTCCCAGTGATCAAGTCATATCGTAAACCCCTTAGC
GACCCGAACAATTACAGAGGCATCAGCCTCATCCCTATCATCACTAAACT
CATTGAAAAACTTATTCTGCTCAAATGTCCGAATCTCAAAAATCACCAAG
ATGCTCAATTCGGCTTCACGTCTGATGGCTCCACCACGCACGCGGAATTA
CTACTGAGAGAAACTATTTCCAAATACAACAACGAGAACACTCCAGTATA
TATGTGCAGTCTTGACGCTGAAAAAGCTTTTGATTGTTGTAATTGGCTGG
CACTATTTCAACATCTTATTGATAAAACCACTTTACCAAAACAGGTCACC
CGCTTTCTAATCGACTTGTACCTGAAAGGAGAAGCAAATGTCAAATATAG
AAATCACTTCTCAGATACGTTTCGTTTATCCCAAGGAGTTAGACAAGGGT
CAATCTTATCGCCATACCTGTATAACCTCTACACCGAGGAGATTATTGAA
AACATCCACAATCTCAAGGTAGGGACGCAACTCGAACAATCTCTGAACAC
TTCAATAATAGTGTTTGCGGACGATATCATTTTACTCAGCCCGACCCTCA
AACAACTTCAAATTATGATAGACACCTGTTTCAACTATGGCCAGAAGAAA
GGCATCAAATTTAACACAGACAAACAAAAAACTCAATTTTTGATATCTGG
AAAGCACCCATTTCCTAATCCAACCCTAAATCTAAACGGTGAAACCATCC
ACCCTCAAACCAACCTGAAACACCTTGGATTTCAATGGTCAATCAAATCT
CGACATCTTTCTCTCTTAAGACATTTTGAAGATCGTGTCTCTGAATTATG
GGCAGTCAGTTCATCACTCATCTCTTGTGGTATCCGGAAACTACATCCAA
GCTCGATTGTAACACTTTTCAAATCAATAGTGATCCCTAAGGTACTGTAC
GGTCTGGAAATCACTAACTTGAATGTAACGCAAAGTCAACTACTTGACCG
CCAACTTCGCTCTGCACTCAAATCGTTGATGGGACTCTCAAAGCACAGCA
CCAATGAACTTCTGAAGTACTTTAACTTGACTACAGTTACAAACCTTCTG
AAGCAACGTAAGATCAATCTTGTAAACCAACTGATGAAGAATCCAATGAC
ATCATCTTACTTGTTCTCCATTCTATCTCAACCAAACCGCTCACACTCGT
TGATACAAGATTTATTAGACACCTGTCAGTCGGAGGGTATCAATGTGATC
GACCTCCTGCTAAGCCCCAAGAAGCACAAGTTGACCATGGTTACCGAAGA
TAGCTTGGACCTGGAAACTGAAACTAGAATAAAAAACATTCTTGAAAATT
GGTCTGTCATTGAGAACAGACAAGAACTGAAAAATATGCTTACAAGATAT
ATATAAGTCTTCTTCGTACCAGCAAAGAGAGGCTCCTCTGGTCGCCCCTA
CGGAGGTACAGCCATGCTTATCAATAAAAACCAAATCAATAACAAACCGG
AACACATCCTTGATGAAGACTATGCAACAGTAATCAGAATCAATACATCG
CAAAACACTTCCTTACTATTAATCGGTGTCTACCTCCAGTCAGTTAACCA
AAGCCCTAACCTCAAAGAAACCTATAATGCACAACTCTCAGCTCTATCTG
GAGTAATATCTCACTTTGAAGACATCTCGGACATTGTTATCTTTGGGGAC
TTTCAAAGTTGCCCACAAACCTTCGAATCAAACAGACTCAGTCGCCCAAA
CGTTCTCAGTGACAGTCTGGACAACTTCCTCGACCGCCAGGCCCTGACCC
CTACCGACATCACCCATGGCACAGGCCCTTTGTACACATACAGTCACCTA
ACTCTTGACAATAAATCTTATATTGATCACATATGTATTTCACCCAATCT
CACACAAGCTGTCTCGGATACCAAAGTTCTAGACCCTCATCATCTTAACA
CAGGTGACCATTTACCAGTGACGACAACATTAAAAATGTACTCTTCAATT
GCTGACCTCCCTGATGCTGAACACACTGACGATAACGACTTTGTCCCTAC
TTACTTGTGGACAAATAAAATCTTTACTGAAAAATACCAAAAGACAGTAA
ATGATGCTATTTCAGAGTACAAGAACCAAGGTGTAAACATTGAAAATGAT
ATTTTATTTCTTCATCAAACACTTAAAGAGAGTGGAATAAGAACTGCCTC
TGAACTACGTAAGGACAATTCTTTCCATAAAATAAACCCAAAACCTTGGT
GGAACAATGAACTTTCCAAGAAGAAAAAAACTCTGCAAACAATGTTCAAC
GCATGGAAAGAAAAAGGTTTTACCAAAGATACAAAAAATACAGAATTCAA
CCGTTACAAATTAGCCCGTAGAGACTTTCGTATCCTAATTAAAACCTGCA
AAAATCAAGCAACCGCAGAACACTATGTGAAACTGGATAAAATTAAACAT
TCAAACCCAAAATCCTATTGGAAAAACATACGTCTAGCAAAGGGACAATC
ACAAAAGCTATATACGATCAATGGCAAAACATCAACACAAGATATAAATC
AAGAATTCAAAAACCACTTCGACAAACTCTTAAACACGCCAAGAATTCAC
CAGATTGACAACAATGAATCCAACACTCAACTCCAACATATCCTCGAAGA
TTTGATAAATGACCCATCTGATGATTTCCACGTGATTAATACGGAGGTTC
AGTCTGCCATAAAAGAACTAAATAAAAATAAAACAACAGACCCATACTCA
ATCAAAGCTGACCATTACCTTCACGCTGTAGATGAACCTTTTCTATCCTT
CATTACCCAGCTGATCAACGATATTATAAAGTCTGACGTAACTCCAACAT
TACTTGCCACATCTCACATCGTCCCAGTGATCAAGTCATATCGTAAACCC
CTTAGCGACCCGAACAATTACAGAGGCATCAGCCTCATCCCTATCATCAC
TAAACTCATTGAAAAACTTATTCTGCTCAAATGTCCGAATCTCAAAAATC
ACCAAGATGCTCAATTCGGCTTCACGTCTGATGGCTCCACCACGCACGCG
GAATTACTACTGAGAGAAACTATTTCCAAATACAACAACGAGAACACTCC
AGTATATATGTGCAGTCTTGACGCTGAAAAAGCTTTTGATTGTTGTAATT
GGCTGGCACTATTTCAACATCTTATTGATAAAACCACTTTACCAAAACAG
GTCACCCGCTTTCTAATCGACTTGTACCTGAAAGGAGAAGCAAATGTCAA
ATATAGAAATCACTTCTCAGATACGTTTCGTTTATCCCAAGGAGTTAGAC
AAGGGTCAATCTTATCGCCATACCTGTATAACCTCTACACCGAGGAGATT
ATTGAAAACATCCACAATCTCAAGGTAGGGACGCAACTCGAACAATCTCT
GAACACTTCAATAATAGTGTTTGCGGACGATATCATTTTACTCAGCCCGA
CCCTCAAACAACTTCAAATTATGATAGACACCTGTTTCAACTATGGCCAG
AAGAAAGGCATCAAATTTAACACAGACAAACAAAAAACTCAATTTTTGAT
ATCTGGAAAGCACCCATTTCCTAATCCAACCCTAAATCTAAACGGTGAAA
CCATCCACCCTCAAACCAACCTGAAACACCTTGGATTTCAATGGTCAATC
AAATCTCGACATCTTTCTCTCTTAAGACATTTTGAAGATCGTGTCTCTGA
ATTATGGGCAGTCAGTTCATCACTCATCTCTTGTGGTATCCGGAAACTAC
ATCCAAGCTCGATTGTAACACTTTTCAAATCAATAGTGATCCCTAAGGTA
CTGTACGGTCTGGAAATCACTAACTTGAATGTAACGCAAAGTCAACTACT
TGACCGCCAACTTCGCTCTGCACTCAAATCGTTGATGGGACTCTCAAAGC
ACAGCACCAATGAACTTCTGAAGTACTTTAACTTGACTACAGTTACAAAC
CTTCTGAAGCAACGTAAGATCAATCTTGTAAACCAACTGATGAAGAATCC
AATGACATCATCTTACTTGTTCTCCATTCTATCTCAACCAAACCGCTCAC
ACTCGTTGATACAAGATTTATTAGACACCTGTCAGTCGGAGGGTATCAAT
GTGATCGACCTCCTGCTAAGCCCCAAGAAGCACAAGTTGACCATGGTTAC
CGAAGATAGCTTGGACCTGGAAACTGAAACTAGAATAAAAAACATTCTTG
AAAATTGGTCTGTCATTGAGAACAGACAAGAACTGAAAAATATGCTTACA
AGATATATATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000253_pilon | genome | sc0000253_pilon:504984..507839 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-2856:2857 |
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