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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000134_pilon:412182..414077+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038331 ID=XLOC_038331|Name=XLOC_038331|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1896bp|location=Sequence derived from alignment at sc0000134_pilon:412182..414077+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTATACTTTAGAATTGAATTATCAAATGTTGATTTCAACTCTTATAAA
AACTTTGGTAATATTATCAACATGTCagctttgtttttctttgaaaaaca
ttCTCATACTTGGTGGTGATGGTATGATGGGGAGTGCAACAACAAAACTT
CTGATGaagcaaaaaacaaaattcaatttGACGTTGGTCAACCGTGGTAA
TTGGTATTGGGATTCAGAGGAGACCATCAAGCCATTTGTTCACCATTATG
AATGTACAAGAGGAGATGGATTTCGTGATTTGTGTACAAGGCTCAATGAT
GGTCTTTTCTATGATGCTATTGTAGACTTTAGCTGTTATCATCCCCTAGA
TATGGAGGTATTtcctttcaaatattttgtgaaattttagaGGAATTCAG
AAAGCTATAACCAGAATGtatatttttactttatatatACAGAGTGTGTT
GGTGTATCTCTTTTTATAGAATCAAACCTCTTTTATCAGCTTCCATTGGA
AGAGAAAAGatcaacttaaattttgaaaggttatttgttgaatttattca
ttaagtcaaaagtttgaaattaaaatgattgTAAAAGGATTGTTGAGTTG
GTAATGTAAAATATTGTTTATCGACATTTAATAAAACAACATGTTTAAGC
ATGCTTGTTAAACCTGAAGGTTGTGATTACCCTCATTGTAATTCAATCTG
TCTAGCTGTGATATTGTATCTCAATAAAAAAGAGGGAGATGGAATCTTTA
TTCAAAGCATTTATTGAATGACTGTTGAATACATTGATTCATAATAACAT
GAACAGATTCTTAGAAAAAATAGGGAATGCTAGAGTGAGACAGATATTAT
GGATGAACTTTGTTTacgatatttttttcaataatttatgttttttatct
ttctagGATATTTTGATTGTGTTTCGTGGAAGGTTTGGGAAATACATTTA
TATCAGTTCTGATTCTGTTTATGAAGTGTGTCAAGGGAAAAACCATGTGG
GATATTCTAAAGAAACTGATGCACTGAGACCACATGATAAAGCTTTGCAG
TAAGATGTATTTTACTATCctttttcacgttttttattGAGGACAAAGTT
GTTTCATTCAATATCATTATTAAGAGGACATTGCTTAGGTGTTGTTCCAA
AAGTATTGTTTATTATAATAAAATTATGGAAAAAACAGTCACCTCtttta
acagattttttattttatttcagagAACAGTTAAATAAGAGAGACTCTTA
TGGCCATCAGAAGTTGCAAGGAGAAGAAACCCTTCAAAAGTTCtacaaaa
gattgaaatttgACTACATTGCTCTACGTCTACCGGACGTAATTGGTCCT
AGGGACAACACTAACAGATTTTGGAAGTGTTTTCTGTGGACTAAATTCAC
TGATATTATTGGGCCTGTAACCATACCAAAAGAAGTCCAAGATCTTCCTC
TCAGTTTTGTGTATAGTCATGATGTTGCCCAATTAATCTACTCTTTGGCA
GATGAAGTTTACAGCCCTGATGTTTATAATCAAGCTTACAATCTAggttt
taaaaagttatacaccCTTAGGAATATATTTCAAGATATGTCATCATTTA
TCGGGAGAGGTTCGGTGAATATTACTGAGGGAGATTTCAGAATTGGTTTC
CCGTCTGTGACAAGAGGCCCTGTGGATATATCAAAAGCAGAAAAGATGCT
AGCCTGGAAGCCAACTCCTATAGAGAAAGCATTGGTTGAAACAATGGAGT
TTTATGATGATGCTCAGTTCAATGGTGATTATAAATACATAATGGATCGT
GTTTTGGAATTTCATGGTGTGTCACGTGACAAATATCGTGAGTTTGTTAT
CCAGCACCATAAGGAGATGGAGAGTAGACAGAAACAGGAATTATGA Coding sequence (CDS) from alignment at sc0000134_pilon:412182..414077+ >XLOC_038331 ID=XLOC_038331|Name=XLOC_038331|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2346bp|location=Sequence derived from alignment at sc0000134_pilon:412182..414077+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTATACTTTAGAATTGAATTATCAAATGTTGATTTCAACTCTTATAAA
AACTTTGGTAATATTATCAACATGTCagctttgtttttctttgaaaaaca
ttCTCATACTTGGTGGTGATGGTATGATGGGGAGTGCAACAACAAAACTT
CTGATGaagcaaaaaacaaaattcaatttGACGTTGGTCAACCGTGGTAA
TTGGTATTGGGATTCAGAGGAGACCATCAAGCCATTTGTTCACCATTATG
AATGTACAAGAGGAGATGGATTTCGTGATTTGTGTACAAGGCTCAATGAT
GGTCTTTTCTATGATGCTATTGTAGACTTTAGCTGTTATCATCCCCTAGA
TATGGAGATGTATACTTTAGAATTGAATTATCAAATGTTGATTTCAACTC
TTATAAAAACTTTGGTAATATTATCAACATGTCagctttgtttttctttg
aaaaacattCTCATACTTGGTGGTGATGGTATGATGGGGAGTGCAACAAC
AAAACTTCTGATGaagcaaaaaacaaaattcaatttGACGTTGGTCAACC
GTGGTAATTGGTATTGGGATTCAGAGGAGACCATCAAGCCATTTGTTCAC
CATTATGAATGTACAAGAGGAGATGGATTTCGTGATTTGTGTACAAGGCT
CAATGATGGTCTTTTCTATGATGCTATTGTAGACTTTAGCTGTTATCATC
CCCTAGATATGGAGGATATTTTGATTGTGTTTCGTGGAAGGTTTGGGAAA
TACATTTATATCAGTTCTGATTCTGTTTATGAAGTGTGTCAAGGGAAAAA
CCATGTGGGATATTCTAAAGAAACTGATGCACTGAGACCACATGATAAAG
CTTTGCAGATATTTTGATTGTGTTTCGTGGAAGGTTTGGGAAATACATTT
ATATCAGTTCTGATTCTGTTTATGAAGTGTGTCAAGGGAAAAACCATGTG
GGATATTCTAAAGAAACTGATGCACTGAGACCACATGATAAAGCTTTGCA
agAACAGTTAAATAAGAGAGACTCTTATGGCCATCAGAAGTTGCAAGGAG
AAGAAACCCTTCAAAAGTTCtacaaaagattgaaatttgACTACATTGCT
CTACGTCTACCGGACGTAATTGGTCCTAGGGACAACACTAACAGATTTTG
GAAGTGTTTTCTGTGGACTAAATTCACTGATATTATTGGGCCTGTAACCA
TACCAAAAGAAGTCCAAGATCTTCCTCTCAGTTTTGTGTATAGTCATGAT
GTTGCCCAATTAATCTACTCTTTGGCAGATGAAGTTTACAGCCCTGATGT
TTATAATCAAGCTTACAATCTAggttttaaaaagttatacaccCTTAGGA
ATATATTTCAAGATATGTCATCATTTATCGGGAGAGGTTCGGTGAATATT
ACTGAGGGAGATTTCAGAATTGGTTTCCCGTCTGTGACAAGAGGCCCTGT
GGATATATCAAAAGCAGAAAAGATGCTAGCCTGGAAGCCAACTCCTATAG
AGAAAGCATTGGTTGAAACAATGGAGTTTTATGATGATGCTCAGTTCAAT
GGTGATTATAAATACATAATGGATCGTGTTTTGGAATTTCATGGTGTGTC
ACGTGACAAATATCGTGAGTTTGTTATCCAGCACCATAAGGAGATGGAGA
GTAGACAGAAACAGGAATTATGAagAACAGTTAAATAAGAGAGACTCTTA
TGGCCATCAGAAGTTGCAAGGAGAAGAAACCCTTCAAAAGTTCtacaaaa
gattgaaatttgACTACATTGCTCTACGTCTACCGGACGTAATTGGTCCT
AGGGACAACACTAACAGATTTTGGAAGTGTTTTCTGTGGACTAAATTCAC
TGATATTATTGGGCCTGTAACCATACCAAAAGAAGTCCAAGATCTTCCTC
TCAGTTTTGTGTATAGTCATGATGTTGCCCAATTAATCTACTCTTTGGCA
GATGAAGTTTACAGCCCTGATGTTTATAATCAAGCTTACAATCTAggttt
taaaaagttatacaccCTTAGGAATATATTTCAAGATATGTCATCATTTA
TCGGGAGAGGTTCGGTGAATATTACTGAGGGAGATTTCAGAATTGGTTTC
CCGTCTGTGACAAGAGGCCCTGTGGATATATCAAAAGCAGAAAAGATGCT
AGCCTGGAAGCCAACTCCTATAGAGAAAGCATTGGTTGAAACAATGGAGT
TTTATGATGATGCTCAGTTCAATGGTGATTATAAATACATAATGGATCGT
GTTTTGGAATTTCATGGTGTGTCACGTGACAAATATCGTGAGTTTGTTAT
CCAGCACCATAAGGAGATGGAGAGTAGACAGAAACAGGAATTATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000134_pilon | genome | sc0000134_pilon:412182..414077 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 502-1173:1225 |
| Aaloc | 358-498:907 |
| Aaloc | 1-357:1 |
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