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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000403_pilon:20886..22528- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039959 ID=XLOC_039959|Name=XLOC_039959|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1643bp|location=Sequence derived from alignment at sc0000403_pilon:20886..22528- (Clytia hemisphaerica_ch_hm2_pilon)
AAGGTGCCTATCAGATGTCAGAAAAATATGACCTTCATTGTTAACCTGAA
TGCACTCAACAATCCAAAAGACATAACTGCCGACGATAATGGTGCCTACA
TCAACGGTTTTGGTAGAGATATTAATATCCATACTATTATCACTGAAAAC
AAAGTCATCATTGATGAAGAGGGAGACGAAGGAGATAGATTCATCTTAAC
GAAATACAATGGCACCAACAAAGCATGTCCTGATTTTCACAGAAAGATCA
TTCGATTGAAAATTCCTAATCAGGCAACTTATTTCCAATATTGCTTAGTC
AAGTACAATTTTGACGGGAATGAGAAGCAATTCACTGTGAAAGCCCATGG
ACATTCCAAAAACAGGGTTGCGTCATTTAAACAAACTACCACCAGTATGA
GAGAAGTTATAAAAACAACGGCGAAAGTCAATAAACCCTCAGAATCTATA
AGGCAGATCAGAAAAAACACTGGAGGAACGTTGAATATTGATTCGTCATC
TCAAAATCCCCGGAATATAATGCAGGTTAAGAACTTTCGGAGAGATGTCT
CTTCTACTACTAGCAAATCTGATAAAGATTTTCTTGCTGATTTGATGAAG
GAATGCAAAAGAACAATGAATACTGACGATGAGATATTTATCAGGCGTGT
TGAAGGAGCCCCAGAGCCAATTTGCCTTATCGGAACTGAGGCGGCCTTTA
AGGATATTGAGAGATTTTGCGTAAAGATGCCATATGGGCTCAATTCAGTT
TTGACTATAGATCCAACCTTTAATTTTGGAGGTTTTTTCTTCACCCCGAC
AACCTATAAGAATATGGCCGTGTTACGGGCTGACACAAATCAACCAAAAA
TTGATATGGGACCTGCCCTCATTCACTATCGAAAAGTATTTTCGACTTAT
CATTATTTTGCGTCCAGCTTGGTCAGCATCAACCAAGAGATGTCAGAGTT
AAAATGCTTTGGCACGGATGGAGAAACTGCCTTATCCGATGCTTTCGCCA
AAACTTTTCCCCTTTCTGACCAATTGAGGTGCTTCATTCACTCGAGAAAG
AATGTTGAACAAAAACTTACTGACTTTGGCTTATCAAGCTGCAAATCAAC
GATCGTAGAAGACATATGTGACCCTCCAAACGATTTGGTCGTGCTCGTGC
CGCTTTCCGACTGGTTAATTGTGCGAGTAAAAGTTGAAAAAAGCGGCCAG
AAGACCGCACAGTACCGTATGGTCCGTGCGTACAAAACGCCGACTAAAGC
GGACGATGGTGCGGTCCTCGTCGACTAAAGCGGACGATGGTGCGGTCCCG
CCGTTTGTATGTATGTTGTATGCTGTTTGTTATGATTTCTCGTTTGCCGG
CAAACGTTTCGAACGGCAAAATGTCCGCACCATGACCGCACTGAATACCG
CACTTATTCAAATGGTGCTCTTTAGTGACCGATCGAGTGCGTTTGAATGG
ATTTTTAGAAAAGATTTTTGGATGATTTCTGGCCGATACAAAGGTATAAT
TTTACCGCACGGTAAATCATTTCGCCGCTTTTTTACCGCCCATATTATCG
ATCTGTCCGCACCAAGACCGGTCTCATTTTTAATGTACTCCAAATCGCTT
GGGGGGTCACATATTTGGAAAGACGGAAGGCACGCATAGGTAA Coding sequence (CDS) from alignment at sc0000403_pilon:20886..22528- >XLOC_039959 ID=XLOC_039959|Name=XLOC_039959|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2292bp|location=Sequence derived from alignment at sc0000403_pilon:20886..22528- (Clytia hemisphaerica_ch_hm2_pilon)
AAGGTGCCTATCAGATGTCAGAAAAATATGACCTTCATTGTTAACCTGAA
TGCACTCAACAATCCAAAAGACATAACTGCCGACGATAATGGTGCCTACA
TCAACGGTTTTGGTAGAGATATTAATATCCATACTATTATCACTGAAAAC
AAAGTCATCATTGATGAAGAGGGAGACGAAGGAGATAGATTCATCTTAAC
GAAATACAATGGCACCAACAAAGCATGTCCTGATTTTCACAGAAAGATCA
TTCGATTGAAAATTCCTAATCAGGCAACTTATTTCCAATATTGCTTAGTC
AAGTACAATTTTGACGGGAATGAGAAGCAATTCACTGTGAAAGCCCATGG
ACATTCCAAAAACAGGGTTGCGTCATTTAAACAAACTACCACCAGTATGA
GAGAAGTTATAAAAACAACGGCGAAAGTCAATAAACCCTCAGAATCTATA
AGGCAGATCAGAAAAAACACTGGAGGAACGTTGAATATTGATTCGTCATC
TCAAAATCCCCGGAATATAATGCAGGTTAAGAACTTTCGGAGAGATGTCT
CTTCTACTACTAGCAAATCTGATAAAGATTTTCTTGCTGATTTGATGAAG
GAATGCAAAAGAACAATGAATACTGACGATGAGATATTTATCAGGCGTGT
TGAAGGAGCCCCAGAGCCAATTTGCCTTATCGGAACTGAGGCGGCCTTTA
AGGATATTGAGAGATTTTGCGTAAAGATGCCATATGGGCTCAATTCAGTT
TTGACTATAGATCCAACCTTTAATTTTGGAGGTTTTTTCTTCACCCCGAC
AACCTATAAGAATATGGCCGTGTTACGGGCTGACACAAATCAACCAAAAA
TTGATATGGGACCTGCCCTCATTCACTATCGAAAAGTATTTTCGACTTAT
CATTATTTTGCGTCCAGCTTGGTCAGCATCAACCAAGAGATGTCAGAGTT
AAAATGCTTTGGCACGGATGGAGAAACTGCCTTATCCGATGCTTTCGCCA
AAACTTTTCCCCTTTCTGACCAATTGAGGTGCTTCATTCACTCGAGAAAG
AATGTTGAACAAAAACTTACTGACTTTGGCTTATCAAGCTGCAAATCAAC
GATCGTAGAAGACATAAGGTGCCTATCAGATGTCAGAAAAATATGACCTT
CATTGTTAACCTGAATGCACTCAACAATCCAAAAGACATAACTGCCGACG
ATAATGGTGCCTACATCAACGGTTTTGGTAGAGATATTAATATCCATACT
ATTATCACTGAAAACAAAGTCATCATTGATGAAGAGGGAGACGAAGGAGA
TAGATTCATCTTAACGAAATACAATGGCACCAACAAAGCATGTCCTGATT
TTCACAGAAAGATCATTCGATTGAAAATTCCTAATCAGGCAACTTATTTC
CAATATTGCTTAGTCAAGTACAATTTTGACGGGAATGAGAAGCAATTCAC
TGTGAAAGCCCATGGACATTCCAAAAACAGGGTTGCGTCATTTAAACAAA
CTACCACCAGTATGAGAGAAGTTATAAAAACAACGGCGAAAGTCAATAAA
CCCTCAGAATCTATAAGGCAGATCAGAAAAAACACTGGAGGAACGTTGAA
TATTGATTCGTCATCTCAAAATCCCCGGAATATAATGCAGGTTAAGAACT
TTCGGAGAGATGTCTCTTCTACTACTAGCAAATCTGATAAAGATTTTCTT
GCTGATTTGATGAAGGAATGCAAAAGAACAATGAATACTGACGATGAGAT
ATTTATCAGGCGTGTTGAAGGAGCCCCAGAGCCAATTTGCCTTATCGGAA
CTGAGGCGGCCTTTAAGGATATTGAGAGATTTTGCGTAAAGATGCCATAT
GGGCTCAATTCAGTTTTGACTATAGATCCAACCTTTAATTTTGGAGGTTT
TTTCTTCACCCCGACAACCTATAAGAATATGGCCGTGTTACGGGCTGACA
CAAATCAACCAAAAATTGATATGGGACCTGCCCTCATTCACTATCGAAAA
GTATTTTCGACTTATCATTATTTTGCGTCCAGCTTGGTCAGCATCAACCA
AGAGATGTCAGAGTTAAAATGCTTTGGCACGGATGGAGAAACTGCCTTAT
CCGATGCTTTCGCCAAAACTTTTCCCCTTTCTGACCAATTGAGGTGCTTC
ATTCACTCGAGAAAGAATGTTGAACAAAAACTTACTGACTTTGGCTTATC
AAGCTGCAAATCAACGATCGTAGAAGACATATTTGGAAAGACGGAAGGCA
CGCATAGGTAAATTTGGAAAGACGGAAGGCACGCATAGGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000403_pilon | genome | sc0000403_pilon:20886..22528 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1117-1146:31 |
| Aaloc | 1-1113:1644 |
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