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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000019_pilon:2306577..2311298- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_018547 ID=XLOC_018547|Name=XLOC_018547|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4722bp|location=Sequence derived from alignment at sc0000019_pilon:2306577..2311298- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTGATGCTGTCATGAACTTCAAAAAGGACGTTTACACAAAATTGCT
TGAAAAGTTGCAAATCAATTTGAACTCAGAAGAAAGAGAACTTGAAGGCA
AACCATTGATTAAAAGAATTATGCAAAAGTGGCTTCCAGCTGGTGAGACA
ATGTTGCAATTGATCACTATTCACTTGCCATCCCCTGTTGTCTCTCAAAG
TTATCGTGCAGCTATGTTATATGAAGGTCCTCCTGATGACGACGCATGTA
TGGGTATAAAAAACTGCGACCCAAATGCACCTTTAATGATGTATATTTCC
AAGATGGTACCATCGTCTGACAGAGGACGGTTCTTTGCCTTCGGACGTGT
CTTCTCTGGAAAAATTGCTACTGGTCTCAAAGCTCGTATCATGGGTCCTA
ACTTTGTTCCAGGAAAGAAAGAAGACCTCTATTTGAAATCTATTCAAAGG
TAATTTGCTTTAAGAACAAGAAAAATGTGATTTTAAACATTAAGCTGCAT
TAAGTGATCTTTGAAACACTCTTGAAAGTTGCGAAAAGGCAATTTTTTGA
ATTCAGTTCCAAGAACAAAATAATCGACCCAGGCTCTTTTTAATTAGTTG
GGAACTATTTAAAACACAAAGAATTAACCTCATAATGAGCTTTTTCTGTT
AATAAGAGCCTAGGGCATCAAATTTTTGTCACGATTCTCATGGCTCATGT
ACAAAACTTAGGATTAAGTTTCAAAATTCAAGCAAAGATTGAGTTTCTGC
CACCGTTATCCTATTACAGAAAAGGCTTGGAAATTTGCCTGTAGGGGTGT
ATAGAAGATAATGGTCTCTCTTTTCATTTGAATATCATGACCAATACAGA
AGATTTTCAGTCGGAAATTAATTAATAACCAATGCTTATCTTAGGAAGAA
ATTGTCAATTTTTTGACAAATAAGTGAAATTAAATTCCAGGAAACACAAA
TATTCTTAGGACTTTATAGGTCTTTTTTTGGGAAAATGGACCATATTGTA
AATCCTCTCAACCAAAATTAAATTCTGCCAAAATATTTTCGCTTTACGTT
AGCCCTGCATCAGTAAGAAACTTGTTTCTATTGTACTTTCAGAACCATTC
TCATGATGGGGCGATACACCGAGCCTATTGAAGATGTACCATGTGGTAAC
ATTTGTGGTCTTGTTGGCGTAGATCAATACTTGGTCAAAACTGGAACCAT
TACAACCTTCGAACAAGCTCACAACATGAAACAAATGAAATTCTCTGTTT
CTCCTGTTGTCCGTGTTGCTGTCCAACCAAAAGATCCACAACAGTTGCCA
AAACTTGTTGAAGGATTGAAACGTTTAGCCAAGTCGGATCCTATGGTCTT
GTGTTTGACAGAAGAATCAGGTGAACACATTGTTGCCGGTGCTGGAGAAT
TGCATTTGGAAATTTGCCTTAAGGTTAGTCTTATTCCTACTTTAATCGGG
AACTTCACCCCGTGCACGCCTTGTCTTTTTGGGAAAAATGACAGTTTTAC
GCTTTCCGTCATAACTTTTGATCTACTAAACCGATTCAAAAAAATAAACC
CATTCTGGAAAGCCCAACTATCCTGCTTTCTAAAAATGTTAAAATAAAGG
ATTTTTCTCTATCAATGGTGACACAGTAGTCTTCTGCCTTAGAGTTGAAA
AAAATTCAAAACGCAATTTGTCATATTTTTCAAAATTTTAAGTTCCGATT
AAAAAAAAAGTGGGGAGAACATTTGCGATACCATAATTTTCTGGCTCATT
GTTTCCACCATTATAACTACAACTGCTAGTCAAAAAATCACAATCATACC
TTTACTAGAAAAGGCAGAATTCATTTTTAGAAAACCTTGGTTTTTGAGAA
AATTTCCACGTAAATCAGAGGCACGTAAGGCAGAGGCCCCTTGAGGTAAT
TTTTATGGGAAATATCACTAAAAACAGCTAAAAATGACTTTCCTATCATC
AACCAGCATGAAAGCAATAGAAATAACATAGTATATACACTTTGAAACTC
TTTGCAGCCTTATCAGAAGCCTTAACTTGGGTTTCGGTGACGGTCGATGA
CAGCTGACAAGCCTCCAGTCCTCAACCTTAATGTACCGTCATACTAAAGA
ATAAGGAGGCAGAAACTTACTTCAAACACTGACTAAACTACAAACAAGCA
ATACATAACATTTCCAACCAATAAAACAAACCATTTTCCACTAAATAAAC
ATAAAAAGTTAGTTACAGCAGTCAATGAGCTCATAATTTCCAAAAGAATA
TTTTGCCTGATTTTCCAGTTTGTTTTGACAGTTAAAATCGAAAGTAGGTG
GTTTCAAACTATTGAAAATAGTTTGTTTACATTTTCTCTCTGTCATATGA
GACATTTCCCGGGATTTAAAGGCGTCTTTAAGGCGGTAGGGCGGCTTTTC
TTAACACCCCATGAAAAACGTATATTTACGGCCTCGGCTATATATTAGAA
CGTAAATTTACGGCCTCGGCGTGGTAAAGGTTAAGCCATTTTTTCAAGCT
TTTTAAGTGTCCGATTAAATCACTGAAACTTTGGCAAAGACAACTGGAAA
AGGTGCTTATCTAAAATATCGGAAGCTGAATTTTGGATGATTTACATGAA
TCAGCACCAAGCGGCCACATGCAGTTGCACTAAATATTCTAATTTAACAG
TGGTATTGTTCAGATGGTTCATGGTCTGTGTGTTAGCGATCCTGCAGTCA
GTAAATCGAGTCAAATTAAATTTATCTTTCTACAGTAAGACCTTTGGAAA
ATGGAGATAAATTTGCACTAACATGTTCTTTTTAAAATTTTTGCAAACTC
CATCCTCCTGCCTTGCAAATTAAATATTATCATGTTTGGAAAAACAGGAT
CGGTTGTGTCTGTTCAATAATAAATTAATATGTCTCGCCTAACACACTTA
ATTTAAATGCAATTTCAGGATTTGGAAGAAGATCATGCTGGTATTCCATT
AAAGAAATCTGACCCTGTCGTTTCATACAGAGAAACTGTTAATGACGCTT
CAAGCAGGGTTTGTCTTTCAAAATCACCAAACAAACATAACCGTCTCTTC
TTCTCTGCTGTGAACATGCCTGACGGATTACCAGAAGACATTGATGACGG
AAACGTTACTGCACGACAAGAAATTAAAGAAAGAGCCAGGTTAATTTAAC
TACAAAGCTCTTCTTCCTTCCAAGCAGTTCCAAGCCAAGTTTTAACAGGT
TTTAATGGAAACCTTTCAGTCTCAAATTCCTTACAATTCTGTGTTTTTCT
CTGACCACTTTCCTTGACCACTGTTTTAAAACTGCCCTTCTTGTACTTCT
ACTATTCTAGAATTTTGGCTGACAAATACAACTATGAAGTTGGAGAAGCC
CGTAAAATCTGGTGTTTTGGACCTGACGGTACTGGACCTAATTTTATTTG
TGACGTGTCAAAGGGAGTCCAATACTTAAATGAAATTAAAGACAGTGTAG
TTGCAGGTTTCCAATGGGCCTCAAAAGAAGGTGTCTTGTGTGACGAAAAC
ATGAGAGGAGTCCGTTTCAACGTTCACGATGTAACCTTACACGCTGATGC
TATCCATCGTGGTGGTGGTCAAATTATCCCAACTGCTCGACGTGTTTTAT
ATGCCTCCGTGTTGACTGCCGCGCCAAGACTTTTGGAGCCTTACTACCTC
GTTGAAGTTCAATGTACCATGGACTGTTCCGGTGGTGTCTCCAGTGTGAT
AACCAAACGTCGTGGTCAAATAAACGAACAGGAATCTGTTGAAGGTGGTC
TCTATCACATGAAGGGTGTATTACCCGTCAATGAATCTTTCGGTAAGTTT
CACAACCTGAAGCCATTTTATATGGAAATTAAGTTCTTCTCTTTTTTATG
TGATGCTTTTATTCATCTATACAGGGGGGTCGGTACTAAGTTGTGGGGGC
CAGTGCCGGGTGGTGGACTGATAATGTAAGTAAAAAACAACTTAGTACAT
GATACCAAGTGATGGTCCTAAGTAAAAAAACATTTTTGCAACTTTTTGGA
CTAATTGGTGGTCTCAATACCAAATATGAAGCATCAAGTTAGTATCTGGT
ATTCAAAATCCTGAAAAATCGCAAAAAATTTCTTGTTATAGGCAGTCGAT
ATTTATTTCTTACCATTTTATTAGGATATTTATTACGTTTATTGTTTATT
AAATTTTTGTTTTCCCCCTAGGTGTTATCATAATAGGCCTGATTGGTGTA
ATTATCGTGCAAATTTGGACCAGACATGCCTAATACCCTGTGGATTGATA
TTAGAACGGCGGCTCAGAAAAAAAATTAAGGGCAGCCCTTATTTCTGGAC
CCATTTATTGAAAAGCTAGGGCAAAGCCCAAGAGCTCATTTTTTATGGAA
ATTTCAAACTCATTTTAGGCCAATATTTATTTACGTCATTTTATAAGCGA
TTTATGACCAAAATGAGGGGGGGAAACCACCACTTCTTTTTCAAATAACA
TTGCAGGGTAGGTGTGGTGTGAAATCTTTTTTTATTTTGAAGTTAAATAA
ACGATAAATAAATTTTATCTTTCTACAGGATTCACGTCTGCCATGAGACA
AGCTACTCACGGAAAAGCTTTCCCACAATGTGTGTTTGATCATTGGGAGG
TGATGACTACTGATCCTCTTGACCCAGCCTCACAATCTGGAAAAATTGTC
CTTGAGACACGTAAACGAAAAGGATTGAAAGAATTCGTTCCTGAAGTCAG
CAATTTCGAAGACAAAATGTAA Coding sequence (CDS) from alignment at sc0000019_pilon:2306577..2311298- >XLOC_018547 ID=XLOC_018547|Name=XLOC_018547|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3354bp|location=Sequence derived from alignment at sc0000019_pilon:2306577..2311298- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTGATGCTGTCATGAACTTCAAAAAGGACGTTTACACAAAATTGCT
TGAAAAGTTGCAAATCAATTTGAACTCAGAAGAAAGAGAACTTGAAGGCA
AACCATTGATTAAAAGAATTATGCAAAAGTGGCTTCCAGCTGGTGAGACA
ATGTTGCAATTGATCACTATTCACTTGCCATCCCCTGTTGTCTCTCAAAG
TTATCGTGCAGCTATGTTATATGAAGGTCCTCCTGATGACGACGCATGTA
TGGGTATAAAAAACTGCGACCCAAATGCACCTTTAATGATGTATATTTCC
AAGATGGTACCATCGTCTGACAGAGGACGGTTCTTTGCCTTCGGACGTGT
CTTCTCTGGAAAAATTGCTACTGGTCTCAAAGCTCGTATCATGGGTCCTA
ACTTTGTTCCAGGAAAGAAAGAAGACCTCTATTTGAAATCTATTCAAAGA
TGTTTGATGCTGTCATGAACTTCAAAAAGGACGTTTACACAAAATTGCTT
GAAAAGTTGCAAATCAATTTGAACTCAGAAGAAAGAGAACTTGAAGGCAA
ACCATTGATTAAAAGAATTATGCAAAAGTGGCTTCCAGCTGGTGAGACAA
TGTTGCAATTGATCACTATTCACTTGCCATCCCCTGTTGTCTCTCAAAGT
TATCGTGCAGCTATGTTATATGAAGGTCCTCCTGATGACGACGCATGTAT
GGGTATAAAAAACTGCGACCCAAATGCACCTTTAATGATGTATATTTCCA
AGATGGTACCATCGTCTGACAGAGGACGGTTCTTTGCCTTCGGACGTGTC
TTCTCTGGAAAAATTGCTACTGGTCTCAAAGCTCGTATCATGGGTCCTAA
CTTTGTTCCAGGAAAGAAAGAAGACCTCTATTTGAAATCTATTCAAAGAA
CCATTCTCATGATGGGGCGATACACCGAGCCTATTGAAGATGTACCATGT
GGTAACATTTGTGGTCTTGTTGGCGTAGATCAATACTTGGTCAAAACTGG
AACCATTACAACCTTCGAACAAGCTCACAACATGAAACAAATGAAATTCT
CTGTTTCTCCTGTTGTCCGTGTTGCTGTCCAACCAAAAGATCCACAACAG
TTGCCAAAACTTGTTGAAGGATTGAAACGTTTAGCCAAGTCGGATCCTAT
GGTCTTGTGTTTGACAGAAGAATCAGGTGAACACATTGTTGCCGGTGCTG
GAGAATTGCATTTGGAAATTTGCCTTAAGAACCATTCTCATGATGGGGCG
ATACACCGAGCCTATTGAAGATGTACCATGTGGTAACATTTGTGGTCTTG
TTGGCGTAGATCAATACTTGGTCAAAACTGGAACCATTACAACCTTCGAA
CAAGCTCACAACATGAAACAAATGAAATTCTCTGTTTCTCCTGTTGTCCG
TGTTGCTGTCCAACCAAAAGATCCACAACAGTTGCCAAAACTTGTTGAAG
GATTGAAACGTTTAGCCAAGTCGGATCCTATGGTCTTGTGTTTGACAGAA
GAATCAGGTGAACACATTGTTGCCGGTGCTGGAGAATTGCATTTGGAAAT
TTGCCTTAAGGATTTGGAAGAAGATCATGCTGGTATTCCATTAAAGAAAT
CTGACCCTGTCGTTTCATACAGAGAAACTGTTAATGACGCTTCAAGCAGG
GTTTGTCTTTCAAAATCACCAAACAAACATAACCGTCTCTTCTTCTCTGC
TGTGAACATGCCTGACGGATTACCAGAAGACATTGATGACGGAAACGTTA
CTGCACGACAAGAAATTAAAGAAAGAGCCAGGATTTGGAAGAAGATCATG
CTGGTATTCCATTAAAGAAATCTGACCCTGTCGTTTCATACAGAGAAACT
GTTAATGACGCTTCAAGCAGGGTTTGTCTTTCAAAATCACCAAACAAACA
TAACCGTCTCTTCTTCTCTGCTGTGAACATGCCTGACGGATTACCAGAAG
ACATTGATGACGGAAACGTTACTGCACGACAAGAAATTAAAGAAAGAGCC
AGAATTTTGGCTGACAAATACAACTATGAAGTTGGAGAAGCCCGTAAAAT
CTGGTGTTTTGGACCTGACGGTACTGGACCTAATTTTATTTGTGACGTGT
CAAAGGGAGTCCAATACTTAAATGAAATTAAAGACAGTGTAGTTGCAGGT
TTCCAATGGGCCTCAAAAGAAGGTGTCTTGTGTGACGAAAACATGAGAGG
AGTCCGTTTCAACGTTCACGATGTAACCTTACACGCTGATGCTATCCATC
GTGGTGGTGGTCAAATTATCCCAACTGCTCGACGTGTTTTATATGCCTCC
GTGTTGACTGCCGCGCCAAGACTTTTGGAGCCTTACTACCTCGTTGAAGT
TCAATGTACCATGGACTGTTCCGGTGGTGTCTCCAGTGTGATAACCAAAC
GTCGTGGTCAAATAAACGAACAGGAATCTGTTGAAGGTGGTCTCTATCAC
ATGAAGGGTGTATTACCCGTCAATGAATCTTTCGAATTTTGGCTGACAAA
TACAACTATGAAGTTGGAGAAGCCCGTAAAATCTGGTGTTTTGGACCTGA
CGGTACTGGACCTAATTTTATTTGTGACGTGTCAAAGGGAGTCCAATACT
TAAATGAAATTAAAGACAGTGTAGTTGCAGGTTTCCAATGGGCCTCAAAA
GAAGGTGTCTTGTGTGACGAAAACATGAGAGGAGTCCGTTTCAACGTTCA
CGATGTAACCTTACACGCTGATGCTATCCATCGTGGTGGTGGTCAAATTA
TCCCAACTGCTCGACGTGTTTTATATGCCTCCGTGTTGACTGCCGCGCCA
AGACTTTTGGAGCCTTACTACCTCGTTGAAGTTCAATGTACCATGGACTG
TTCCGGTGGTGTCTCCAGTGTGATAACCAAACGTCGTGGTCAAATAAACG
AACAGGAATCTGTTGAAGGTGGTCTCTATCACATGAAGGGTGTATTACCC
GTCAATGAATCTTTCGGATTCACGTCTGCCATGAGACAAGCTACTCACGG
AAAAGCTTTCCCACAATGTGTGTTTGATCATTGGGAGGTGATGACTACTG
ATCCTCTTGACCCAGCCTCACAATCTGGAAAAATTGTCCTTGAGACACGT
AAACGAAAAGGATTGAAAGAATTCGTTCCTGAAGTCAGCAATTTCGAAGA
CAAAATGTAAGATTCACGTCTGCCATGAGACAAGCTACTCACGGAAAAGC
TTTCCCACAATGTGTGTTTGATCATTGGGAGGTGATGACTACTGATCCTC
TTGACCCAGCCTCACAATCTGGAAAAATTGTCCTTGAGACACGTAAACGA
AAAGGATTGAAAGAATTCGTTCCTGAAGTCAGCAATTTCGAAGACAAAAT
GTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000019_pilon | genome | sc0000019_pilon:2306577..2311298 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1486-1677:193 |
| Aaloc | 1003-1482:1412 |
| Aaloc | 781-999:1805 |
| Aaloc | 451-780:3630 |
| Aaloc | 1-447:4723 |
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