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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000006_pilon:1802745..1807830+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041615 ID=XLOC_041615|Name=XLOC_041615|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5086bp|location=Sequence derived from alignment at sc0000006_pilon:1802745..1807830+ (Clytia hemisphaerica_ch_hm2_pilon)
aaaaagtctaccaaaggaaaggaaaagaaagaaaaaaggaaagaggTTGg
ataaatttagattttgatcAGGCTTGAAATAACAGTCTGTGATTTTTAGG
GTCCACTTTTTATTGTTGCAATATTATAACTGGTGAAATCTGGATTTATA
TGTATCTGTCAGAGGCCtttcatactatcttttttagtCATTGTAGGTTG
TAAGGAATGAAAGGTTatcaaatttcttcattttttattagtAGTAGGCT
ATAAATATTTACAATCTTCTTTGTTCCTCAAGATCAAGTTAggtcttttc
tttttataggaaaTTATGAAGAAGAATGAAGCTGTACTTGCAGTCAAAAA
TGCAAACATGGTATATATGTATTTTGCTTAGATATTTTCAATGTACCAAT
GTAGAAGAACTAGCcaaatttttgaattctttgatTAAATTTCAATGTTG
CTAAAATTATGTCacaatttttcctttttgaatCGCGTCTGACAACTTCA
AATTGATCTTTAATTCTACATTAGGTTGATGACCCATTAGCTGTCCTTCC
AGCATTTGCTACTTATAAAAGAAATGAGTAAGATTTTAAGCATCATATTA
TAAAAGAGTGGGTGTTTGCAAGTCTTgttaaactgttttttttttgtttt
tttttttactttttgacaagTATTCAAGAGTTCTTTGATGGGATAAGAAA
GTTTTCTAGGTATCATCAGAGTCcaaatggaaatttgaaaaggcCTTATC
TGCAGAATGTTTTTTCAACAACAAACTTTCAATACTTATTTTAATACAAT
TAATCTGAATTTGTGTGACCTTCTCTGGTAATTTTGGAAAAGCAGACCTT
TGgttcattttgaagtttttagaaatttcagaaaacgtCACATAAACTTC
agcttttttttccaaactgccCTGCGATACGATTAATaacaaaatttact
aaaatCCCTACTGAGTATATTTCAATACCAGAATGCACAGGAAGGAATGA
ACCAGAATAAACAGTGAAAACAACCATCAAATCCCTGCAAATCCTCGTTG
AATCTTAAAAGATTCTTTGATAAATTTAACTGAAAAACATTGAATCCCTG
AGATTTTGTTAATCTCAATGTTTTATGTATGAATTTTTTAGATTGGACCT
GACGTTACATAGTAAGAGGGCTAGTCAAATGTCAGAAGATGAAATGGATG
TATGTTACAATCTGGTTAAAGATAACATGCAATTAATGTGAGCCTAATTT
CATACCTAATTTTTATGTAACTTTATTATGGAAAAccaaattaaaggttt
tatttttacataagtgttccagtttcatatcagacacatatttcacatca
ggacagtgtctgcctattgttatattatgctgatataagcaaaaaatgtt
tttctttttctctttctgaccaagtgaattaaaattgatgagtaagcaaa
cgatatcactcttatttaagaacaaaacctttaacataaTCTTGTTTGCG
TAAcatatttgaatatttatttattcattacaCCCTCTGCTACTGGTGCC
TGTCTACGTAATCTTAACAAAGGGAATTTTCTTTCCATGGGTTATTTAAT
GTTATGTGCTTACTTTAAAAACTTTAGGTACGAGAACAGTAATTGGGGAT
GgaatgaaaaagagaaaaagattgaaatgaatgaagaaaatgCTAGGTAA
GTAACAATTCTTTGAGattaatgacaaaaattctaGGAAGAGAGTACATT
AAGAATGATTTTCTTATAAGGGGTGAAGCAGAAAGTTATTCAGGTAATAG
TACAAATTACAAAGGTTagaaatcaaattattttgaaatgatTAAAGCCT
TCTAAATTACTTGAATTCTATACAAGTTGAAgaactttcttttgatttta
gatATTTATATGCTTTGGACGGTGAAAAGAATATTGTTGCAATGACACAC
TTTCGATTTGACGTTGATGATGATGTAGAAGTCATATACTGGTAAGTGCG
ATACACCTTCTTAATATATCCGTTGACAAGAGGTAACGACTGATGATGAC
CTTCGCAGTAAAGTTGGATTTGGCTAAAATCTAATAAATTTGGTTGTTAT
ATTTCTTTTGTACTAATAAACGTCATatcaaataagttgaaaaagatTGT
CAACAACAGCAAAGTGCTCTACCAGAAGGAGCAATAATATAAAATCCTCC
TTTCAACCCGTCagcccagggggggggtactaccgtTGTCGACCGACgag
ggtgctccgctgaggttcaaaaaatggaccctacgtgggactcgaaattt
tcgaaagggactgaaattccaaaattttctcaaattttctactttttccc
caaattttcctaaaataggcaccctacaagggactgatttttctatttgg
tgtttttgcgaccctacctgggactcgtggaggttaaaaaggtaccctga
ccagcggtgcatccccgtaacccatcttgccctagtaccccacCCCCGGG
CCGTCAGCtttttttACCGTAAGGTTAAATGAATAAGTTGTGTGTGGAGT
TCCCCTTTTCGTAACTGTTCCCATTGATTAAATGgactcaatttttcttt
tagttaTGAGATTCAACTTGTAAGTTCAATCCGTGGAAAAGGTCTAGGGA
AATTCATGATACAGGTTCTCGAACTTATGGCATTGAAGTAAGTtgtcatt
ttggaagaaactgTCGCTTGCTATGTTGAGTTTGTACCAAATTCTGAAAA
GCAAGGTctcattaataatttttttaactacATTTGAACTACATTCCCCT
TAGCTCAAAAATGGACTCTCAAATGTTATAAATTCATGGGACTAGTCCCT
TTAATATTGGGAGATCCTTTTCAAGCCAAACAAAGTTCAAATTGCAATTG
TGCGAATATCCTctggaaaaatgacaaaatttgcacaaaaaagtcatggA
AAAACTTGCTCTATTGCCTTTGGAAAAGATTCTACTACTTTCCATAAAgt
aagggtggacgaactaaaatcaaatttcagaatagcttttaaccccctgg
aaatttaaaCAAGGTTTCTAGAAATTACAACCTTAACCTTGTGCCTAGAA
ATAAAATGTTCAAATCTGGAAGAAGGAAATATTAATGGGTGATGCTTTGT
CGTCCAACGCATTGGGAAAAGAACAATTCAAAccaaactttttggaaaaa
tgcaAAACAATGTTTTATAGGACCCCTGGGATTTCTTCTTTTGGGATACC
TTGGAAAAGTTCGTCtatcattgggctcttccagaaaatttttgtacatg
gggggggagaatatattggatattttgtccgggggataGTGataaatctg
caaaatttactttgttttgggggcaaatttgctCTGAATGgaggtgattt
tgaatgtctgggagttcaactgatgcttgtccagggggtgaGATCAGTGT
CCaaggggtcaaaattcacaatgtctggggggaaatttccaaaaaatgtt
atatcctccaaaccccaaaatcaatttttttcttgaagagcCCATCATGT
ATACAGataaaaatggaatggcccattgactttacatattttttatattg
atgAATCTTTAAGTTTTCCATTTGTTATCAATTTCAGAGCTAAAATGAAG
AAAGTTGTGCTAACAGTTTTTAAAGGTGagagaattttcattttcattgc
cTTACCCAATTTCCATTTTTAAAGAACGGCCCACTCCCGAAAAAATGGGG
AAGAATCGCAAAACCTTCTGAAGAATTCGACTTcgttttggaatattttc
tgattgttttttgaatttccataAGAAGAGATTTGATCACTTTGGCACGT
CAATTTCAAAGTTTCTAGGGGCAAGGTAATCAAAAAAGGGTATTCAATCC
GACGATTAATAGAATTGAAGAGATAGCATGAAAGGGAATAGCCCAGGGTA
TACTTAAggtttttgatagactggatggcgcaatCAATTAGCCCAGTAGT
AGTATATGGCAGCTCTAAATTTTGAGCCAGATTTTAGATGTTATGGGGCA
GTGTTTTTATTAGAAAAGGGCATTGTAAACCTGTTTATTAACATGTTGGT
TTCTCATGCttctttattatatttttcaatgctAAGTAGCTTTATCGCTA
ATTGAAATATtggtgtttttctttcaaagcgGGCTCGTCAagtgctccta
gtctacttcactggactcagaaAGCATTATCAGAAAGCAAAATTCAGCCA
GTAGGCTGTAGTCTACAGAGTACAGTCTACAGTCTACAGAGGACAGATCT
AGAGAAAAAGGGCAAGTCCCCTTTTTCAATTATTTGTAAAACTCAAACTT
TGTTATTCACATAGAGCCACTGACAAAATAATTCTCCTCTTCTCTTTAGC
AAATTCAAGGGCTGTCAATTTCTTCAACAAACTAAAGTAAGTCTTTTTTA
CCTGACATATTCCTTTTTTCCTGGAAtcaattaaaaatataaatgtgATG
AAAAGCTGAACTCGTAATGTTAGGTAGAACTTGCACTTTATTCATTTTGA
CCATTGCCTGACCATAAAACGGTCGTATGAAATCTTCCATTTATACCTAG
ATGTGTCCTACCCCAGcgggcacacaacgttgtttcaacgtttatttaac
gttcacaacgtccatataacgtccatataacgtccTACTTTTGAATTGTC
TGCGTAAGTATCAATTCCATAGCGTACCTcggtgaatctaaaaatagtac
CAAATTTGCACAAATATATTCGTTTGTATGACTTGCAATCCCATCCTCCT
TTGCGTTAATTTCTCTTGCACATTAAAATCtttcaatatcaaaagaaagg
caAGATCTTTCACGGTTTTccaataattttgaaatgaactaTGTGATTGA
GACTCGTACAAATTTGAGTTGATATAATAATGACGTGTTGGACGCGGAGT
TCATGttgtaataatatttttaaattcttttgtgcTCAGATATACTATAG
ACTCCACTTCACCGCATTACATTGACCCTCTACATCCTGAAGACTATGAT
TACGAAATAATGAGCAAATCTCTACCAATCAGGTGA Coding sequence (CDS) from alignment at sc0000006_pilon:1802745..1807830+ >XLOC_041615 ID=XLOC_041615|Name=XLOC_041615|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1320bp|location=Sequence derived from alignment at sc0000006_pilon:1802745..1807830+ (Clytia hemisphaerica_ch_hm2_pilon)
aaaaagtctaccaaaggaaaggaaaagaaagaaaaaaggaaagagaaaaa
gtctaccaaaggaaaggaaaagaaagaaaaaaggaaagaggaaaTTATGA
AGAAGAATGAAGCTGTACTTGCAGTCAAAAATGCAAACATGgaaaTTATG
AAGAAGAATGAAGCTGTACTTGCAGTCAAAAATGCAAACATGGTTGATGA
CCCATTAGCTGTCCTTCCAGCATTTGCTACTTATAAAAGAAATGAGTTGA
TGACCCATTAGCTGTCCTTCCAGCATTTGCTACTTATAAAAGAAATGAAT
TGGACCTGACGTTACATAGTAAGAGGGCTAGTCAAATGTCAGAAGATGAA
ATGGATGTATGTTACAATCTGGTTAAAGATAACATGCAATTAATATTGGA
CCTGACGTTACATAGTAAGAGGGCTAGTCAAATGTCAGAAGATGAAATGG
ATGTATGTTACAATCTGGTTAAAGATAACATGCAATTAATGTACGAGAAC
AGTAATTGGGGATGgaatgaaaaagagaaaaagattgaaatgaatgaaga
aaatgCTAGGTACGAGAACAGTAATTGGGGATGgaatgaaaaagagaaaa
agattgaaatgaatgaagaaaatgCTAGatATTTATATGCTTTGGACGGT
GAAAAGAATATTGTTGCAATGACACACTTTCGATTTGACGTTGATGATGA
TGTAGAAGTCATATACTGatATTTATATGCTTTGGACGGTGAAAAGAATA
TTGTTGCAATGACACACTTTCGATTTGACGTTGATGATGATGTAGAAGTC
ATATACTGttaTGAGATTCAACTTGTAAGTTCAATCCGTGGAAAAGGTCT
AGGGAAATTCATGATACAGGTTCTCGAACTTATGGCATTGAAttaTGAGA
TTCAACTTGTAAGTTCAATCCGTGGAAAAGGTCTAGGGAAATTCATGATA
CAGGTTCTCGAACTTATGGCATTGAAAGCTAAAATGAAGAAAGTTGTGCT
AACAGTTTTTAAAGAGCTAAAATGAAGAAAGTTGTGCTAACAGTTTTTAA
AGCAAATTCAAGGGCTGTCAATTTCTTCAACAAACTAAACAAATTCAAGG
GCTGTCAATTTCTTCAACAAACTAAAATATACTATAGACTCCACTTCACC
GCATTACATTGACCCTCTACATCCTGAAGACTATGATTACGAAATAATGA
GCAAATCTCTACCAATCAGGTGAATATACTATAGACTCCACTTCACCGCA
TTACATTGACCCTCTACATCCTGAAGACTATGATTACGAAATAATGAGCA
AATCTCTACCAATCAGGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000006_pilon | genome | sc0000006_pilon:1802745..1807830 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 571-666:4991 |
| Aaloc | 535-567:4402 |
| Aaloc | 496-531:3639 |
| Aaloc | 412-492:2605 |
| Aaloc | 322-408:1903 |
| Aaloc | 253-318:1629 |
| Aaloc | 157-249:1143 |
| Aaloc | 103-153:525 |
| Aaloc | 52-102:310 |
| Aaloc | 7-51:1 |
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