|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000026_pilon:293417..298701+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044535 ID=XLOC_044535|Name=XLOC_044535|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5285bp|location=Sequence derived from alignment at sc0000026_pilon:293417..298701+ (Clytia hemisphaerica_ch_hm2_pilon)
ACACAAAGAagtatgaatttgaaaattctaaagtCAAATGATGTCTATGT
TCTCACGATTTGTTTGATTCTTGTGGTTGGTTCTGGGGCCAATTTCTCGA
ATGGTACTGGTAACATTACCAGAGGTaagtaaatattttcaacattttat
gattacacgtttttttataagaacacccaaaatttttgaagccttcagat
gttcttaacatgtccttattttccccatattttgagtatttctatccatt
ttcctaagaaaataggtgttttagagtccccaaagccttaaaatgttctt
aactttttggccatcgaagcattgtgtccttatatagtttgttcttatat
aaagaaCACGTAACAATTCTATCAAGGGGCGATTTCAAGCGATTTACCTT
AGGTGCGGCTTTTAAGGGTACGTTTTCAAGGGTTCTCAAATTGCattgta
ccgtcaactgctctaacttgggacgattggtcgaaacatgggactgcttg
atatctggcctgtattttcacttacttttaaatctctttgacaacaaatt
tgttttgatagctccaccaagtttatcaatcatacttcttcgttcctctt
agagtgcacagacactcgcgtgtgtttcactacggatttttttttcatat
ttcgatttaaaagcgtactcggtgcgaaagagaaatcgtgtattttttaa
tacgccgttcatttactcaaatcaaatgactttggaggttaaGTGAAAtt
gtggccaaattgccgtcccatgttttgtcagatagtcccaagttagagca
gttgacggtaagggTCGGAATAAGAGAAAATGCGCATCCTAAAGGTGTAA
AGAATGAGAAGAACGAAATATTTAAGGCGAAATTCGGGAAAAACCTgacc
atttttttctttaaaatgagcaaaagttttaaagaaaatgcaCCTTAAGG
GtcattttcttccaaatttactcaaatttacaTGCATTGGACGGCATGAG
GCCATGCAAAAATCAacattgaataattaaaaataatatttaaacaATCA
GCCAGTGAAACAAAACTCTTAGTCTCTTATTTTCAAAGAGAACCTTTTTG
GGTCTTTTTCGCGGAACGGAAAATTAAGGACTGTtacaaaagaattcaaa
tccccaggcATAAaagatatgggaatatcaatccccatcgagtttgtGTC
CATTAATTTTATACCCACTGGTAGAAAAAACcctatcgggtctgtgagaa
gggggtgtttttgaGCTCATATCACTGAATACTTTCCATTTCATTTCAGG
CAAGTCACTAACGGATATTTACGACAAAATATTCGGAGAATCAGCCAATT
ATAAACCAGAAGTCAAAGCATCGCAGGAGGAAGGACGAAGACGACTTGAT
GTCATATTTGATATCAACATTCGTACAATACTCGGACTGGTAATGGCTAT
TTGTATTATTTCTGTATCTCAGTCTGATAAATAATTGCTCAAAAGAGGTC
CTAACTATTAAAAAATAGTGCGTCCTAGAAGAAGCATCTAGAAAAGCCCg
agcattttttgatgacgcGCAGATTTCAACAATACAACCCTAGGCTTTTG
ATGGTTAAATCACAAGATATCTGCTTGGTTTTAAGATCAATGATTTTACA
TAGAGGTAAAACTTGGGCCGAATGTTAATAATTTTACAATCTGCATACGT
TGCAACcgaattctttgaatttttttttgtaggaAGTCAAAACTCAAACC
TTCCATCTCACAGCTGTTATACACATGGTAAGAAAATCTTAGTCATCTAA
TATAGGACTTTTAGTCAAAACCTTTAGACAGTTGTTAGATATTTCTGAGC
TGaacaggaaaatttcaactttttgtgcCTCAAATTGACAATGACACCAG
TCCCAAATAGggtaggaaaattgacaaaatttccctcctttttagtccca
ttAAGACACTGAGGGTCAAAAGTCGGGTGGCACATGCCCGTCATATTGCA
AACttaatgccccccccccccaggaactCAGTATGGGAAAGATTTGAGAT
TCGAAACAGGAATTCCTAGTTTGTGgcccggggggggcagctgggcaaaa
ggaccgacgggtatgtgcgggtcctaagggtaccttttccaatatgttta
aaatgcactgtaagggtcggaaaaactagagatgcactgtaagggtagaa
atttcagaaaattcttgaaaaatctagatattttgaccaaaaatgctagg
attttgaccattttttgcacgaaagggatcgaaaatttgggggaaaatgc
actctaagggtatgattttcactgatttttgctgcactgtaagggtgcaa
ttttaaaagccaatttttggcccgcacataccgtcagtccgcaaacccag
tgcccctcCCCCCGGGGTTTGTGGTACTGAAATCAACCCTAAGATCCTGG
CTTAAGTATATTTCTTTATAATGCTAGTATATCTACATCAATatgattaa
aatttttagaGATGGAAAGACAAAAGATTGACTTGGAACGAAAGTGAATT
TGATGGTATCGATACGTTAAACGTTGGGAATTCCATTGTCTGGACTCCTG
ACATCATGCTTTATAACGAGTAAGAGAATTGTTTGGTGTTTTACTGGTGA
TCAAACATTCTGTTTTCTGCATTATCGACTATTCTGTTATAgaagaataa
aaatataatacaCCTTGGTCTTGTAGTATTGATAATGAAACCCAGATTAT
AAACTGGACAGGGCTGCACCCCGGgaaagtacactttttttataaaagag
actaaaaaactttaaaaaatactcaacttttgccaaaactttagaataaa
ataagaacaatgcaaaaGATTCTGATTGTAAGTGAATGCCAATAAGTGAA
TAAAGTAAAGATACGAAGAACAGTCTTAAAATcacagaaaataaaatttt
ttttcacgaatTGCAGCAAAAACTCCGGTGTCTCCGTAAACACATTATAC
GAATCATGAATAAATATGTTTTCCTAAATCTTGATccatctttctttctt
ttagcGTGAACGAGGAAACGTTATCACACACAGAGATATTCCGTTCCAAA
GTGTTGATTCAAAATGACGGTACAGTAATATGGACGAACCCGGTGACTAT
CAAATCCACGTGTCAAGTTGATGTCACGTGGTTCCCTGTTGATTATCAAG
TAATGAGTTATTGATTTTTAAAGGAAAGGGTCTGTTGCTGagggaaaagg
aaaaaaataattttgttgcCAGAACTTACAAAACATGGGAAAACAGGCAT
ACTGGAATGGGATGAAAGTTCCAAAGTACCCTCTACGTGGGACCAAGGAA
TTCCTTGGTGGGACTGAGCTAAATTTTATGTTTTGCGACACCACACCTGT
CACAGGTGGAGGTGAAAAATAAACACATCCCCGAACCTCTTTATATCCAA
GTCAATCTCCAGAGCTAagataatattttcataaaatcttaCACTTATAT
TTCCCTTTTGTAGGTTTGTAATTTGACGTTTGGTTCATGGTCCTATTCTG
AGCAAGTCATGAATATAAAGTttcgaaataaaaagaaagatcGCGACATG
ATTAAGTCAGGTAAATCTTTAAAAACCTTCAAATGTTCCTTGTTACACCT
GCTCTGTACCAgcgtgtatctcacgattatcgtagcgtagttcactctgt
gcgcattgtctgtttcataaaaattttcccgaacggagacctctgcgatg
aagtataattttaaaataaagtgGCAGCCAAAAAGCTACGACAATTGTAA
ACAAAGAGATGGGGTCCATTATTAAGGATCACTTTCTAAGCATgttttgg
ctgcttttttaatgtttttgagccaaactaaaagctgataattattgaaa
attattttcccatTACCCtatattttaccattttacctatactccatcgc
agcggttggtttgaaaaatctcaaacaagaaaagacaatgaaaacagacc
ctctacggcaatgaattttaaaatcttaaatctttaaaaagcttaaaaaa
taatTGGGAATGGTTTTGCAGTGCACTTTTTTACATTgcatttcgaatgg
ggatgagaTCAAATTTTCCTGGTTGGGCTCAAATGGAAGAGAATTTTCCC
ACTAGGGTTGAACTTTTGGGTAAATTTTCAAGTGAGGCTGGGGTTCCAgc
gtgacacaggggtgtcttgGTTGAAATAGGTTACTGAACTGAAATGCTGG
AATCTCCATTCCCAGCTTGTAAACAATATTGATTCAACGTTTATCTATCA
CATGTATCTGTAtcacaacgtctatataacgttatatgaacgttgaaaca
acgttgtgttccAGTTATTTTGGCAACTTCCCTTTCCATAGGAGAACGCA
TGCTCAAAGAAAATCAAGatgcaaaattttgatttttaaaacagaTTTGA
AATATCACAACTGATGTTtaccttttcatttttagattttcacaTTCCAA
GTGGCGAATGGTCGATGgaggaaatcaagtttttcgaagaagaaaaaaca
tttgaatgCTGCAAAAATCCTTTCTCAGTCATTACATTACAAGTCTTCAT
GAAGCGTTATCCAGATTTTTACTATCTCTATGTATTTCTCCCCTTTATCT
CACAAATCATTCTATTCCTGCTGATTTTTCACATCCATCCTGACCAAGGA
GATCGTTTGAGTTACGGAGTTGCCCTGCTGTTAAATATGACTATGTACAT
GATTTTCCTATCTGATAAACTACCAGAGAAATCAGACAGTGTGCCATACG
TTGGAGCTCTGTTTGTCACATTCTTCTTCCTACTCTCTATTGCATTGGTT
TTATCAGCTGTAACGATGCATTGCTCGACACGCGATACACCTTTACCAAT
GATTGCTCACAAAGTTAAAGCAATTACTAATCGAATATGGCCTTGTGGAA
AGAAATCAAATGCTAGATCCAAATCGAGTAAATACGGATCTTACAACATG
AAACTCCGAAAACCAAAATCAGAAACAGATTCCAATTTCAATGATCCTCG
TGGTCCCAAGGGTGATGCAAATCGAAAAGTGTCGGATTTGATAGAATCGG
ATTCTGAGTCAAGCTCAGTTGAAATTGCCGGTAACGACAAATATGAGAAT
CGTTTCGAAGGATGGTTCGAATTCATGAGATTTACGGAAAAATGGCTAAC
AGTCATCTTTGCATTTTTGCTGGTTGTTATACCAATAATAATTGCCGGCT
CTGTTAACACACGAATGACTCAACCTGATTACTGA Coding sequence (CDS) from alignment at sc0000026_pilon:293417..298701+ >XLOC_044535 ID=XLOC_044535|Name=XLOC_044535|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2922bp|location=Sequence derived from alignment at sc0000026_pilon:293417..298701+ (Clytia hemisphaerica_ch_hm2_pilon)
ACACAAAGAagtatgaatttgaaaattctaaagtCAAATGATGTCTATGT
TCTCACGATTTGTTTGATTCTTGTGGTTGGTTCTGGGGCCAATTTCTCGA
ATGGTACTGGTAACATTACCAGAGACACAAAGAagtatgaatttgaaaat
tctaaagtCAAATGATGTCTATGTTCTCACGATTTGTTTGATTCTTGTGG
TTGGTTCTGGGGCCAATTTCTCGAATGGTACTGGTAACATTACCAGAGGC
AAGTCACTAACGGATATTTACGACAAAATATTCGGAGAATCAGCCAATTA
TAAACCAGAAGTCAAAGCATCGCAGGAGGAAGGACGAAGACGACTTGATG
TCATATTTGATATCAACATTCGTACAATACTCGGACTGGCAAGTCACTAA
CGGATATTTACGACAAAATATTCGGAGAATCAGCCAATTATAAACCAGAA
GTCAAAGCATCGCAGGAGGAAGGACGAAGACGACTTGATGTCATATTTGA
TATCAACATTCGTACAATACTCGGACTGgaAGTCAAAACTCAAACCTTCC
ATCTCACAGCTGTTATACACATGgaAGTCAAAACTCAAACCTTCCATCTC
ACAGCTGTTATACACATGaGATGGAAAGACAAAAGATTGACTTGGAACGA
AAGTGAATTTGATGGTATCGATACGTTAAACGTTGGGAATTCCATTGTCT
GGACTCCTGACATCATGCTTTATAACGAaGATGGAAAGACAAAAGATTGA
CTTGGAACGAAAGTGAATTTGATGGTATCGATACGTTAAACGTTGGGAAT
TCCATTGTCTGGACTCCTGACATCATGCTTTATAACGAcGTGAACGAGGA
AACGTTATCACACACAGAGATATTCCGTTCCAAAGTGTTGATTCAAAATG
ACGGTACAGTAATATGGACGAACCCGGTGACTATCAAATCCACGTGTCAA
GTTGATGTCACGTGGTTCCCTGTTGATTATCAAcGTGAACGAGGAAACGT
TATCACACACAGAGATATTCCGTTCCAAAGTGTTGATTCAAAATGACGGT
ACAGTAATATGGACGAACCCGGTGACTATCAAATCCACGTGTCAAGTTGA
TGTCACGTGGTTCCCTGTTGATTATCAAGTTTGTAATTTGACGTTTGGTT
CATGGTCCTATTCTGAGCAAGTCATGAATATAAAGTttcgaaataaaaag
aaagatcGCGACATGATTAAGTCAGGTTTGTAATTTGACGTTTGGTTCAT
GGTCCTATTCTGAGCAAGTCATGAATATAAAGTttcgaaataaaaagaaa
gatcGCGACATGATTAAGTCAGattttcacaTTCCAAGTGGCGAATGGTC
GATGgaggaaatcaagtttttcgaagaagaaaaaacatttgaatgCTGCA
AAAATCCTTTCTCAGTCATTACATTACAAGTCTTCATGAAGCGTTATCCA
GATTTTTACTATCTCTATGTATTTCTCCCCTTTATCTCACAAATCATTCT
ATTCCTGCTGATTTTTCACATCCATCCTGACCAAGGAGATCGTTTGAGTT
ACGGAGTTGCCCTGCTGTTAAATATGACTATGTACATGATTTTCCTATCT
GATAAACTACCAGAGAAATCAGACAGTGTGCCATACGTTGGAGCTCTGTT
TGTCACATTCTTCTTCCTACTCTCTATTGCATTGGTTTTATCAGCTGTAA
CGATGCATTGCTCGACACGCGATACACCTTTACCAATGATTGCTCACAAA
GTTAAAGCAATTACTAATCGAATATGGCCTTGTGGAAAGAAATCAAATGC
TAGATCCAAATCGAGTAAATACGGATCTTACAACATGAAACTCCGAAAAC
CAAAATCAGAAACAGATTCCAATTTCAATGATCCTCGTGGTCCCAAGGGT
GATGCAAATCGAAAAGTGTCGGATTTGATAGAATCGGATTCTGAGTCAAG
CTCAGTTGAAATTGCCGGTAACGACAAATATGAGAATCGTTTCGAAGGAT
GGTTCGAATTCATGAGATTTACGGAAAAATGGCTAACAGTCATCTTTGCA
TTTTTGCTGGTTGTTATACCAATAATAATTGCCGGCTCTGTTAACACACG
AATGACTCAACCTGATTACTGAattttcacaTTCCAAGTGGCGAATGGTC
GATGgaggaaatcaagtttttcgaagaagaaaaaacatttgaatgCTGCA
AAAATCCTTTCTCAGTCATTACATTACAAGTCTTCATGAAGCGTTATCCA
GATTTTTACTATCTCTATGTATTTCTCCCCTTTATCTCACAAATCATTCT
ATTCCTGCTGATTTTTCACATCCATCCTGACCAAGGAGATCGTTTGAGTT
ACGGAGTTGCCCTGCTGTTAAATATGACTATGTACATGATTTTCCTATCT
GATAAACTACCAGAGAAATCAGACAGTGTGCCATACGTTGGAGCTCTGTT
TGTCACATTCTTCTTCCTACTCTCTATTGCATTGGTTTTATCAGCTGTAA
CGATGCATTGCTCGACACGCGATACACCTTTACCAATGATTGCTCACAAA
GTTAAAGCAATTACTAATCGAATATGGCCTTGTGGAAAGAAATCAAATGC
TAGATCCAAATCGAGTAAATACGGATCTTACAACATGAAACTCCGAAAAC
CAAAATCAGAAACAGATTCCAATTTCAATGATCCTCGTGGTCCCAAGGGT
GATGCAAATCGAAAAGTGTCGGATTTGATAGAATCGGATTCTGAGTCAAG
CTCAGTTGAAATTGCCGGTAACGACAAATATGAGAATCGTTTCGAAGGAT
GGTTCGAATTCATGAGATTTACGGAAAAATGGCTAACAGTCATCTTTGCA
TTTTTGCTGGTTGTTATACCAATAATAATTGCCGGCTCTGTTAACACACG
AATGACTCAACCTGATTACTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000026_pilon | genome | sc0000026_pilon:293417..298701 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 664-1461:4488 |
| Aaloc | 565-660:3514 |
| Aaloc | 421-564:3056 |
| Aaloc | 310-417:2510 |
| Aaloc | 265-309:1733 |
| Aaloc | 127-264:1302 |
| Aaloc | 1-123:1 |
|
