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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000001_pilon:3581530..3585803+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.191.1.p2 ID=MSTRG.191.1.p2|Name=MSTRG.191.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4274bp|location=Sequence derived from alignment at sc0000001_pilon:3581530..3585803+ (Clytia hemisphaerica_ch_hm2_pilon)
ACCATGATTATTACCCAAAACTTATGAAAGTAACTCCATGGTTTTAGTTG
AGTATTTTGGCCAGTAAATTGAGATCAGCTAATAGGTTTTTGTTTTactc
attctagatttttgaatataaaatttatgaaattaacAGATAGAAACGTG
ACAAAATACTTTAATTACACTAGGTAAATACTACAGTTCATCTAAgctaa
tattttcaaaaatagtgGTTTCTGAATTAATTCGGTATAGTTCCTCAAGA
CCATGTTTAGattgaatgaaaatttctttgacttCATTCATTGCCATTTT
TCTTGCTTCCCTGTTTGCTGCACGCTTCAAAACAAGGTCAAGTTCAACTT
CATTCAGCTTGCAAACTTTTATTGTATAGCCTTTCCTTTTTAAACGTATC
ATATAATCTATCAGTTCCTCATATTGTACACACGTTCCCTCTGCCACAAA
ACTAAGTTGGTTCTCAAGAAGCCAGTCTGTTAGGATGATTGCAATCTGAC
GTGCTCTTGgataaaatttatttacttCCATTTTACTAAATCCTGGTAGC
TGCTCCATGATTTCATCAGTGTCAACATATGCATATTTTCCATAGGTTTT
GTGGGgaagaattttgttttgaataaaggTAGTCTTGCCTGATCCCATGG
GACCTAACACAAATAAAGCATCTTTATAGTATTGAATGGAACCTGACCTT
CTGTAAAAtgtcttatatttttcaatgagtTGGTTATTGTCTTTTTGCAA
TGGACACATTTCTTTTGATGAATAGAATCGTTTATGAATGTAGTGGTTTC
TACTTAAACATTTGTTATTGGTGGGTCTATATGCAGCTTCACATCTCAAG
TTTCTTTTTTGAACCATACAAACAACAGCAAAGTTGAACACATGAACACA
TAAAATAGTTTTGGTTGATTAGTTGAAGCAACATGATTAGCACATAACAA
CAAAGCTGGAAGTTGAATTCTTTGAAAACCTCTATTAAAACTGGATGAGA
GAATTGGAGCAAGGAGAACCATAGGTGTGATTCCTTTGTTATTCAGTTTA
CTGTTAAATTTCAGaagaatttgaatcaaaatttcTATGAATGAAAAATT
AGAACATAAAATATTCATAACATGTATaataaaaggaaagaaatttgtAT
GTATTCATCAGTAGCAGCTCAAATTAAAAGGCAAATCAAAGCTTATACAT
AAGTAATAggtgaaatcaaagaaaactaTCTAATAAACATTTCTAATAAT
GGtaataaaaatgaataattCACTTTCTCATCATTTCGTTCGTTGGTGTT
GGTGCTaaaaaaaGAGCTTATGCTTTGAAGCCTCAGTCTCAGAACCTCTG
GAGACATAGATAAAATTGACAACTTCAAAGTAATTAATagggaaaaataa
atacaaaccCCTTGAAAGCTACACTAGACGAATCTTTTCTGACCTGATGC
TGGTTTCCAGTAGATACTGCAAGTGCCAAATCATGAAATTTTATTACCAG
CATGTTTCTCAAATCCGATTTTTAATCCGACAATTACAAACAATTCGTAA
TCGGGAAAACGGAATACgaaaataacaacaaatatGGCGGCATGATGAGG
TGAAAGTTTCGAAAATTCAAATCGAGAATGAGCCTTTTATGGACAGTTTT
GGTATATTGCTTGAAGGTTTTACCGACAGCCTTATGTGCTTATGCTAGTG
ATTTATCATTGATTCATGGGCCTCCAAAATTTATGCAAAAGTTTCagttt
tcaaaggcaattttaGATAATGTTTTGGGTCATGGTTTGGTAGCGTTTTC
CTTGTGGCTTGCTGTTCTTGATTACAATTTATCAAACCGATGGCATTGTT
TTGAATGTTTCCTTAGCTTTTTCATTGGTTCTGTAATAGACATCGATCAT
TTTATTATGGCTAGATCTTTGAATTTGCATGTAAGTATATATTATAATGA
TATAAAAAGTTCGTCCgtaaaaaatttcgtcactttcaccAACTACTACC
CTTCCCTTTGccaccgacgggggtgctccgctgaggttcgaaaaatggac
cctacgtgggactcgttttttctaaaattttgccgaattttgcgaaaaaa
gtgacccggAATGGGACTGtaagtccaaaattttctcaaattttctactt
tttcccaaaattctccaaaaaaggcactctacatgagggactgatttttc
tattttggtgtttttgcgaccctacctccTGGGACTCGTGGTGGGGTTAA
AAAAGGTACactgaccagcggcgcatccccgtaacccattttgccctagt
accacCACCAAGGTgggctatgtttctagaatttagccaggggctatttt
ccttagccccccccccctaaaaaatGTTGGAGGCTGGActcctctgcaca
ctatgtaaatcgattgttttctgaaaacaatggaaagacaatacttcgct
ctccaccgtttatCGATGTtaatccagagtctctataataaatccatagA
AGTAGTAAATTCCATCACCAGTTATTTGGCACCTGGGAGTACTGTGGTTT
ACTATGTAgtgtactttaatcgtagaaattttagcgagactaattttagc
gtatattagcgagtcaggaaaatcttgattttttttggatttattttagc
gaatcacgatttcaaaaaattacgcgtggataaattttagcggatagatt
ttagcgatctgttagactggagtcgtttataatgcatgtaatactaataa
taccaatactactaataataatacgggatttagtttgtataaacgactgg
aagaatccggtgttccagccttatagatacaggggctagctacgcagaaa
cttgcgtagcgagaaaacaatttatcaagcaacaacaaactctcaaaacg
aaatcaactcaaatgaaaaactttcaatacacaaatccacacaaattttt
tttctcgagaattattttgagcaggaaaaaattataatcgcaaatattga
cacttttcttttgtttggagttagtgcgcaaaggtttctagacgactaaa
attgttccattcattactttttgctttatttctactatgtatagattagt
cgtctagcttgctagactagcgatctgtcgattcggcgtgttttagcgga
tttattttagcgaaaatagagAAAACTccctaaaacgctaaaattagtct
cgctaaaatttctacgattaaagtatgtgACGTTTCTCATTCCTCtgcgg
caatgaattttgaaataagccgggtctgtgtacagatcAACTGTAGTTGT
TGCCACTGCTTTTTTCTGTATTGGAGGAATCCAGGAAACGTCTTTGATAA
TAataagtagtaagtaagtatgttcatctggtggctgtcggcggagccgg
gagtgagggagtctatccccttttctatttgcgctagacctgggagatcg
aatgctgaggtggagcgccacacctactctcagctcccagtaacttaccg
cctagatcagattacccaatctaagctactcattcgctgagttggcggtg
accggggatcgaacccacaacccttagattgtaaggcgaatgctctaccg
actgagctacccggccacaAAAATAGATAATAATAAGAGTTGAGTTAAAG
CCAGTGATATTCCCTTTTCGGAAAGACCATACTGTAATAGctgttttcca
atttttttcagaaCGCATTGAATTTATCAAGTCGCCCGATGTTTCACAAC
ACGAGTCTTCTCGTTTTATTTCTACCCATCCACATTTTTATATGGAGCCT
AAAGAACAAAGATGAATGGTATCACAATTTGCTGTTGATATGCGAGACGG
CGATCTTGTCACATCATATAAGGGACGCTAACCGTCGGGGAATGTGGCTT
TGGCCTTTTGGTAACACACCACCGATCCGTCCAAGCTGGATTTACATTTC
ATTGATCGCTATTCTCCCGATCGCTGTGTGGTAtgtcaaaaaacttttga
agaaaaggCTTTTCGAAAGCCCAAGAGTTATAGACCTTGTataaattgtt
tcaaatttagttcaaaatatttatttgccaTAAGTTGATAGGTTTTTTCT
GATATAAagttcaatttatattttttatattgtaGAGTAGATAGATAATA
TGTTCtttcaatgggcttttccagaaaaaaattgaacatggggtggagga
tataataattttcagcgatttacccccggacaaagtgacttttggccccc
ggacaacgggttttaccccccaaa Coding sequence (CDS) from alignment at sc0000001_pilon:3581530..3585803+ >MSTRG.191.1.p2 ID=MSTRG.191.1.p2|Name=MSTRG.191.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1272bp|location=Sequence derived from alignment at sc0000001_pilon:3581530..3585803+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGCCTTTTATGGACAGTTTTGGTATATTGCTTGAAGGTTTTACCGAC
AGCCTTATGTGCTTATGCTAGTGATTTATCATTGATTCATGGGCCTCCAA
AATTTATGCAAAAGTTTCagttttcaaaggcaattttaGATAATGTTTTG
GGTCATGGTTTGGTAGCGTTTTCCTTGTGGCTTGCTGTTCTTGATTACAA
TTTATCAAACCGATGGCATTGTTTTGAATGTTTCCTTAGCTTTTTCATTG
GTTCTGTAATAGACATCGATCATTTTATTATGGCTAGATCTTTGAATTTG
CATaaCGCATTGAATTTATCAAGTCGCCCGATGTTTCACAACACGAGTCT
TCTCGTTTTATTTCTACCCATCCACATTTTTATATGGAGCCTAAAGAACA
AAGATGAATGGTATCACAATTTGCTGTTGATATGCGAGACGGCGATCTTG
TCACATCATATAAGGGACGCTAACCGTCGGGGAATGTGGCTTTGGCCTTT
TGGTAACACACCACCGATCCGTCCAAGCTGGATTTACATTTCATTGATCG
CTATTCTCCCGATCGCTGTGTGGTAtgtcaaaaaacttttgaagaaaagg
CTTTTCGAAAGCCCAAGAGTTATAGACCTTGTataaATGAGCCTTTTATG
GACAGTTTTGGTATATTGCTTGAAGGTTTTACCGACAGCCTTATGTGCTT
ATGCTAGTGATTTATCATTGATTCATGGGCCTCCAAAATTTATGCAAAAG
TTTCagttttcaaaggcaattttaGATAATGTTTTGGGTCATGGTTTGGT
AGCGTTTTCCTTGTGGCTTGCTGTTCTTGATTACAATTTATCAAACCGAT
GGCATTGTTTTGAATGTTTCCTTAGCTTTTTCATTGGTTCTGTAATAGAC
ATCGATCATTTTATTATGGCTAGATCTTTGAATTTGCATaaCGCATTGAA
TTTATCAAGTCGCCCGATGTTTCACAACACGAGTCTTCTCGTTTTATTTC
TACCCATCCACATTTTTATATGGAGCCTAAAGAACAAAGATGAATGGTAT
CACAATTTGCTGTTGATATGCGAGACGGCGATCTTGTCACATCATATAAG
GGACGCTAACCGTCGGGGAATGTGGCTTTGGCCTTTTGGTAACACACCAC
CGATCCGTCCAAGCTGGATTTACATTTCATTGATCGCTATTCTCCCGATC
GCTGTGTGGTAtgtcaaaaaacttttgaagaaaaggCTTTTCGAAAGCCC
AAGAGTTATAGACCTTGTataa
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001_pilon | genome | sc0000001_pilon:3581530..3585803 + |
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