XLOC_015885 (gene) - C. hemisphaerica

Overview
NameXLOC_015885
Unique NameXLOC_015885
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000662:131603..136442+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_015885 ID=XLOC_015885|Name=XLOC_015885|organism=Clytia hemisphaerica|type=gene|length=4840bp|location=Sequence derived from alignment at sc0000662:131603..136442+ (Clytia hemisphaerica)
TTGTGGTTCCTGATTGGTTTTGGCGAAATGGCTTCGGTAGCTGTAAGAAT TATCAACTCTGATAACAAGGTTGCTATGGACTGGACTTTCATCAGCCTTG AATTTTTTAGTTTAACTTACGAGGACTTGATCTCTAAAATCACAAGTGAG CAATTTCCTCAGTGTGTAATAAAAGATTCAGTATTTTCTTgcaaaaatct taaaactcTTTACGGTCTTGCATCTTCAAGCTCGAAAGAGTTTGAAAAGA TCAGAGGAAGAGCTGACACGGACATTATTCAGattgaaaaccggttttca atGATTTATTTCACCGTTTGCTGTCAACATGTGGAGGGCTGTGAAGATTG CCTTATTTTGGAAACCCCCTTAAAACCCCCGGAGAAACCAacagttttta gttttttgatgAATACTGCTAGAGCTGCTTCAAATTCACTTACTTTGGAG ATAGAGAATCCTGGTACCAAGAAAGAAAAGCTTTTTAACGAGGTATTGAA AATGCTTAAAGAGCGCTCTTGCAGGTTCCCCAATAaacattttgatgttt tgaaaagCTTCTTAAATAAGCTAACTGATGCCTTATGGTACATCGATGGT CATAAAGCAACCATTGAAAGAGAATCGATTAGAAAAATTccggaattttt caaaacatttgaaggCTATAATAAGCCTGAGCTTTCCAAACATCGAAAAC GAACTATTGACAATCTTTCCTCTAAGAGGCTCTTGCAACTTTCTCATTCC CTGAAAGATGCCATGCATTGTATGAAGTTCATCGATGATTCAAGGGATTG GTCAGCTGCGAAACTAGATATTTTGATTCTCGCTGAAACTTTACAAAGTT ATGCATCCTACCTCGACACCAAAAATGTAGCAGTAAAACGTATTCACCTG ACACCAAGATCAGAGGTTGAAAAGCAATCAAATGTGACCGTGCTGCCTAT TTgtagaaaagaaaatctttactACAAATTAGTCAAAGCAGACATTGAAC TCGAGAAAGTAGATGTTTATGAGCCAATCACATTAAGAGAAAATTTGCAG GCAGGCATGAGTAGAAAGcggtttttttatattttggatGGTCAGCTTTT ACAAAAAGGCCTAACTTCGAAAGCTGTCCATTATGCTCATAATCTTGGCG GTCCAAAACCGGCTTTACATTTTTTATGGAAGATTCCAAACAAGTTTTCG GACACGGAACTTCTTAAGAAAAACTTAGAAGTCATAACGGACATCCGTAA AAATATTCCAATTTACGAGAGACGTATAACCAAAAGAGAATTTAAGAATT CTTTTGGCTTTGCCGCACCATCCCATGTCTTAAGGTCAATTTTCAAGAAC TTGAAGAATGATCAATCACTATCCAACAACATGAATGAAACAGAAATCGA CCGGAGGCTTGACTTTTCACTAATGGCTGGTGATGAAGGAATTCTCGTAG ATTTACGAGAACAAAACTCTGGGCCTAAGGATAAGAGATTTGAGACTTTC TTCAAAGAGACTGAAAAATACCTTAAAGAGGAAGTAGGTGTCACTGTTCA TGAAAGGAGGCATACACAACAACTTTACGTGGCGAAAGCAGTCAGTTTTA GAGATTTGCGTGACCGAGTCAAAGAACGAGTTCCCGCGAACACTCCCATT CCCTCTGTAAAATGGTTGCGCTAtcagtttcaaccaatcaaccCAACTAC TAACACTGCCAAGTATTACAAGGGGagattgaaaatcaaaatgatggTCC AAAAAAGAcaggttattttttttttccatcgTTGTACTACTGTATGACTa tgaatacacccctgtctcacagacccTATGAGACCccacccactggaaaa aaaacaagaattcgtccccggtggagCAAACCCCCTCAAATTTCTTCTTC gttggaaaaaatgaaatattactATTCCCACTGTGAAATTAAATCTGAAA GAAGCGCACTTTTGCAAATCTTTAGTAAAATACCAACAATTTTTAGGTAA GGGTTCATCATGTCGATGCACATTACTGTGCCGCATCGTGGCGTTACATG CGTGAATATGCGATCAAGCATCGCGACATTGTCCATCTCGTCAGCTTAGA CGACAAACATAAAATCAAATGTGGCGAGCCTTCTTACCCTGTTGCTGCTG TAGAGCGTGGCAAGAAAGTGATAGTCGGAGAAGAACAGGTCATGCCAGTC GGCGACCATGACTTTACAAAATTTGGTATCATACCGTCGGTGTCGTTAGT GGTAATGTTAGATATTATAACTATTatgaaaactcaaaatattcTTTGCC TTGCTCGCAAAACTACAAATTTTGTCAAGAAAAGTCTCTGTCATAAGAGC TCCTTTTAAAAGCAATATTGCATTTAAGCTTAATCATAAAAATCGATATC TACTTTcaatatttgaaataaatattcaatatttttcgatCTTAGATTGA CATCCCAGATGATATCGATGGTAGCTTTTATCGTGGCCAAGTTCATATCG GTTTTAAAGACTCTGTCTTACAGGCATCGTCAGCGCTGCGTCATAGCGCA GAATTGAAAAACGTTCTTGCTGCAAATCATCGTAATTTCAAATTAAGCTA TTCAATTTAATatacaaaaaaagttttattgaaattttctagGATAAGGA ACTGGTTAACATCTTAAATAAGCGTATTGAAAAAAGTAACGAGGCTTGGA AAATTGAACacccaaaataaaaaataattttctattcTCTTTTAGCTGAC AAACCGGTTCTGCTAATGTATAGCGATGGTGGTCCGGATCATCGTTTAAC GTATAACTCCGTCAAGCTTGCTCTAATTTCTTTATTCATTGAACTCGATC TTGACCTACTGATTGCCCTCCGAACTGCCCCCAGTAATTCTTGGGCGAAT CCCGTGGAACGTATTATGTCAATCATCAACATCGGCCTACAAGGAATTGG AGTCATGCGGACTAAAGTTGGGGATGAGTTTGAAAAAGCAGTCGGTAAAA ATATTGTTATTACCTCTGTCAAAAGATTTCCAAAGATTGATACCTCGTTT TATCAGCAACTtatcttaagggaacttattttggcgggaacttattttgc gagtgatgatttttttaaatttctgttAAATAACACAAATTCATAAGTTG TTTGAAGTCGGTTTCGGTTGTAGTGTAAACCGTTTTTGCTACTAAAATCC TGACTTTTATTGTTTAGGCAAAGCGAAAACTTTGAAAGAAATCAGAGAAG TAGTAGCAGCAGGGAACTTCAATGATGAATTGACGAGAACTTTACAAGAT CCAATGGTTTTGTTACAAAACCAGATGAAACGGTTAAATTTGAAAACTAA CGCATTCAAAACCTTTTCACCAGCAGCAAGCGATGAGATCGACAAGCTAT GGGCGAATTGTTTACAAGTTGATGACGGAATAAACGTAtcataaatcttt tttcttctgaaaaaacTTATCTTATTTCTTTTAAACCTGTTGTGCCTTTC TAAAACAGGATCTTTTTTAATCGCCAAACTCTTAAACAATGTCTTATTTA AGAAGGCCtttaaaacgcaatatttttgAATCGCCAGTCAAACTTTGAAG CACTATTGAGTATATTTTGATGTGCTAATATATGTAATTATATAAATTTT TCAATAGAGGGATGATACTACGAAAAAGGGTATGAAAGAAAATGCCGCGT ACCATCAATTCATCAAGAAACATTGCAAGGCAACCCACTATGCTTTCCAA ATAAAGAAGTGCCAAGATGGTGATTGTGGAATCTGCAAGTAGGTTTAGTT TTTAAAGAATAAACctcaataaaattcaaaaaaattataattctgACCAA GCGCACAGCCAGTAGACAAATATCGAATGTTTCCAAATGTTTCCAAATTA TTGAATGTTTCCAGTTGTGAGTctatcactttcatttttcagaCCGTACA GAGATCAGAAATGCATCGGTCTACCCTTTCTACCTGACCCTGAGCTGAAG CCTGGTGAAGAGCACTACAAGCCATTAAGTGAGATGTATGGAAAGGTCAC CACCGATGTAAGTTGTACTTATGAACATAGAAATGTTTTATATACAGTAT CATAACTTCTTAAAAAGAggttttattttgatgaaatatttGGGGACTAA TCGTCGGAGCTTCATATATCTAGCTTTTGTTCATCATTACGATCATATTC TCATTCTCGTATTCTCATTAAATATACAGAACCGTCCTTCGTTGAAAGCC AGACcaccaaacaaaagaaagaagatcGGGTTTTCACCATCTCAGCAACA CGCGAAAAATACGGACATGATGATGCAATGTGATGAGTGTAACAAGTGGC GGctaattttctccaaaaagaaACTCACCAAGAAACACAAAGATTCGCTC AACGAAATTCTTGCTAATATCGCCTACACATGTGGATTTATGTTTGGTAA GTCTTTTGACATAGCAAAACCCTGAAAACCTATAGTTTTGCAAGCTGTTT ACTACTCGTAATGAAAATTCATCTCTCTTTTTGTGTATATTGTATTGAGA ACAAAATTTCCATTCCTTCTTCAGATGACGTCAATCTTCCAAACGGTATC ACTGTTTTCGTCAAGGATCATGATTGTGCAGATCCGATCGAACGCTTATA TTATTCGTGTGGATACGAACCTATTTGTATCCAATGTGGATGGTACCTTC GAGATGCGGACGAAGATGACGTAGCGTATCCGCAGTGCGTTGACTGTACA GAAGAGCCCATCAAAAAGCGATGAAGCATCAttgattttactatttttac tattatgtgttttttttctttacttcaaCTTTGTATTTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00028078TCONS_00028078Clytia hemisphaericatranscript
TCONS_00028079TCONS_00028079Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00028078-proteinTCONS_00028078-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000662supercontigsc0000662:131603..136442 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0.25 0.25 0.58 0.61 0.32 0.23 0.52 0.24 0.31 0.39 0 0.01 0 0 0 0 0 0 0 0 3.37 4.25 0 0 0 0